RNA–Protein interactions for RNA: ENST00000520858.5

PSD3-213, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-213ENST00000520858 AEBP2Q6ZN18 517 aaPredicted RBP33.7■■■□□ 2.99
PSD3-213ENST00000520858 CHIC1Q5VXU3 224 aa31.35■■■□□ 2.61
PSD3-213ENST00000520858 SENP3Q9H4L4 574 aaPredicted RBP28.65■■■□□ 2.18
PSD3-213ENST00000520858 PHF23Q9BUL5 403 aaPredicted RBP28.28■■■□□ 2.12
PSD3-213ENST00000520858 FOXD1Q16676 465 aa26.89■■□□□ 1.9
PSD3-213ENST00000520858 POTEDQ86YR6 584 aa25.72■■□□□ 1.71
PSD3-213ENST00000520858 MSH5O43196 834 aa25.25■■□□□ 1.63
PSD3-213ENST00000520858 PIAS4Q8N2W9 510 aaPredicted RBP24.92■■□□□ 1.58
PSD3-213ENST00000520858 PPP6R1Q9UPN7 881 aa24.78■■□□□ 1.56
PSD3-213ENST00000520858 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
PSD3-213ENST00000520858 ADRA2BP18089 450 aa24.62■■□□□ 1.53
PSD3-213ENST00000520858 MAPK8IP2Q13387 824 aaPredicted RBP22.81■■□□□ 1.24
PSD3-213ENST00000520858 DMRT2Q9Y5R5 561 aa22.69■■□□□ 1.22
PSD3-213ENST00000520858 SCAF1Q9H7N4 1312 aaKnown RBP22.33■■□□□ 1.17
PSD3-213ENST00000520858 CACNB1Q02641 598 aaPredicted RBP22.04■■□□□ 1.12
PSD3-213ENST00000520858 DCAF8L1A6NGE4 600 aa21.73■■□□□ 1.07
PSD3-213ENST00000520858 PPP4R3CPQ6ZMV5 832 aa21.66■■□□□ 1.06
PSD3-213ENST00000520858 HOXD11P31277 338 aaPredicted RBP21.64■■□□□ 1.05
PSD3-213ENST00000520858 RNF39Q9H2S5 420 aa21.58■■□□□ 1.05
PSD3-213ENST00000520858 CNKSR2Q8WXI2 1034 aa21.33■■□□□ 1.01
PSD3-213ENST00000520858 RNF216Q9NWF9 866 aaPredicted RBP21.3■■□□□ 1
PSD3-213ENST00000520858 C1QBPQ07021 282 aaKnown RBP21.15■□□□□ 0.98
PSD3-213ENST00000520858 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
PSD3-213ENST00000520858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.88
PSD3-213ENST00000520858 NCBP3Q53F19 620 aaKnown RBP20.53■□□□□ 0.88
PSD3-213ENST00000520858 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
PSD3-213ENST00000520858 U3KPZ7 1027 aaPredicted RBP20.15■□□□□ 0.82
PSD3-213ENST00000520858 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
PSD3-213ENST00000520858 DSG3P32926 999 aa20.03■□□□□ 0.8
PSD3-213ENST00000520858 POTEHQ6S545 545 aa20.01■□□□□ 0.79
PSD3-213ENST00000520858 CAPN15O75808 1086 aa19.94■□□□□ 0.78
PSD3-213ENST00000520858 SLC4A2P04920 1241 aa19.66■□□□□ 0.74
PSD3-213ENST00000520858 TRHP20396 242 aaPredicted RBP19.51■□□□□ 0.71
PSD3-213ENST00000520858 KCNA4P22459 653 aa19.51■□□□□ 0.71
PSD3-213ENST00000520858 ABCB7O75027 752 aa19.5■□□□□ 0.71
PSD3-213ENST00000520858 ZNF219Q9P2Y4 722 aaPredicted RBP19.39■□□□□ 0.69
PSD3-213ENST00000520858 APLP2Q06481 763 aa19.31■□□□□ 0.68
PSD3-213ENST00000520858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.2■□□□□ 0.66
PSD3-213ENST00000520858 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
PSD3-213ENST00000520858 SAMD1Q6SPF0 538 aaPredicted RBP19.11■□□□□ 0.65
PSD3-213ENST00000520858 RBM42Q9BTD8 480 aaKnown RBP18.99■□□□□ 0.63
PSD3-213ENST00000520858 CHRDL2Q6WN34 429 aa18.88■□□□□ 0.61
PSD3-213ENST00000520858 POLA2Q14181 598 aa18.87■□□□□ 0.61
PSD3-213ENST00000520858 MYCNP04198 464 aaPredicted RBP18.79■□□□□ 0.6
PSD3-213ENST00000520858 ATF5Q9Y2D1 282 aaPredicted RBP18.56■□□□□ 0.56
PSD3-213ENST00000520858 AKT1S1Q96B36 256 aa18.49■□□□□ 0.55
PSD3-213ENST00000520858 SP7Q8TDD2 431 aaPredicted RBP18.48■□□□□ 0.55
PSD3-213ENST00000520858 REM2Q8IYK8 340 aaPredicted RBP18.37■□□□□ 0.53
PSD3-213ENST00000520858 PIP4P2Q8N4L2 257 aa18.36■□□□□ 0.53
PSD3-213ENST00000520858 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
PSD3-213ENST00000520858 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
PSD3-213ENST00000520858 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
PSD3-213ENST00000520858 SLC4A1APQ9BWU0 796 aaKnown RBP18.23■□□□□ 0.51
PSD3-213ENST00000520858 PITPNM1O00562 1244 aa18.2■□□□□ 0.5
PSD3-213ENST00000520858 FXR2P51116 673 aaKnown RBP eCLIP18.15■□□□□ 0.5
PSD3-213ENST00000520858 HAX1O00165 279 aa18.11■□□□□ 0.49
PSD3-213ENST00000520858 ZBTB22O15209 634 aa18■□□□□ 0.47
PSD3-213ENST00000520858 EVX2Q03828 476 aa18■□□□□ 0.47
PSD3-213ENST00000520858 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
PSD3-213ENST00000520858 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
PSD3-213ENST00000520858 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
PSD3-213ENST00000520858 ATXN8OSP0DMR3 200 aa17.76■□□□□ 0.43
PSD3-213ENST00000520858 PRKAR2AP13861 404 aaKnown RBP17.69■□□□□ 0.42
PSD3-213ENST00000520858 FBLN2P98095 1184 aa17.65■□□□□ 0.42
PSD3-213ENST00000520858 MKRN4PQ13434 485 aaPredicted RBP17.65■□□□□ 0.42
PSD3-213ENST00000520858 CLEC11AQ9Y240 323 aa17.62■□□□□ 0.41
PSD3-213ENST00000520858 C19orf67A6NJJ6 358 aa17.59■□□□□ 0.41
PSD3-213ENST00000520858 SPDYE1Q8NFV5 336 aaPredicted RBP17.58■□□□□ 0.4
PSD3-213ENST00000520858 SSUH2Q9Y2M2 353 aa17.54■□□□□ 0.4
PSD3-213ENST00000520858 ZNF692Q9BU19 519 aaPredicted RBP17.48■□□□□ 0.39
PSD3-213ENST00000520858 GABBR2O75899 941 aa17.47■□□□□ 0.39
PSD3-213ENST00000520858 CHADLQ6NUI6 762 aa17.43■□□□□ 0.38
PSD3-213ENST00000520858 LHX8Q68G74 356 aa17.32■□□□□ 0.36
PSD3-213ENST00000520858 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
PSD3-213ENST00000520858 PRR29P0C7W0 189 aa17.23■□□□□ 0.35
PSD3-213ENST00000520858 POTEIP0CG38 1075 aa17.18■□□□□ 0.34
PSD3-213ENST00000520858 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
PSD3-213ENST00000520858 FARP1Q9Y4F1 1045 aaPredicted RBP17.05■□□□□ 0.32
PSD3-213ENST00000520858 CLCN6P51797 869 aa16.84■□□□□ 0.29
PSD3-213ENST00000520858 ZNF579Q8NAF0 562 aaKnown RBP16.8■□□□□ 0.28
PSD3-213ENST00000520858 DCBLD2Q96PD2 775 aa16.79■□□□□ 0.28
PSD3-213ENST00000520858 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
PSD3-213ENST00000520858 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
PSD3-213ENST00000520858 GALR2O43603 387 aaPredicted RBP16.69■□□□□ 0.26
PSD3-213ENST00000520858 PLSCR2Q9NRY7 297 aa16.65■□□□□ 0.26
PSD3-213ENST00000520858 POTEB2H3BUK9 544 aa16.61■□□□□ 0.25
PSD3-213ENST00000520858 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
PSD3-213ENST00000520858 OTUD5Q96G74 571 aa16.61■□□□□ 0.25
PSD3-213ENST00000520858 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
PSD3-213ENST00000520858 PHF12Q96QT6 1004 aa16.53■□□□□ 0.24
PSD3-213ENST00000520858 PELP1Q8IZL8 1130 aaKnown RBP16.46■□□□□ 0.23
PSD3-213ENST00000520858 MNX1P50219 401 aaPredicted RBP16.44■□□□□ 0.22
PSD3-213ENST00000520858 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
PSD3-213ENST00000520858 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
PSD3-213ENST00000520858 POTEMA6NI47 508 aa16.34■□□□□ 0.21
PSD3-213ENST00000520858 NPM1P06748 294 aaKnown RBP eCLIP16.3■□□□□ 0.2
PSD3-213ENST00000520858 POTEJP0CG39 1038 aa16.29■□□□□ 0.2
PSD3-213ENST00000520858 MS4A3Q96HJ5 214 aa16.29■□□□□ 0.2
PSD3-213ENST00000520858 POTEGQ6S5H5 508 aa16.28■□□□□ 0.2
PSD3-213ENST00000520858 ASTLQ6HA08 431 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms