RNA–Protein interactions for RNA: ENST00000520712.1

CLVS1-206, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-206ENST00000520712 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
CLVS1-206ENST00000520712 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
CLVS1-206ENST00000520712 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
CLVS1-206ENST00000520712 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
CLVS1-206ENST00000520712 FOXD1Q16676 465 aa16.35■□□□□ 0.21
CLVS1-206ENST00000520712 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
CLVS1-206ENST00000520712 MSH5O43196 834 aa15.6■□□□□ 0.09
CLVS1-206ENST00000520712 PLPPR3Q6T4P5 718 aa15.54■□□□□ 0.08
CLVS1-206ENST00000520712 PIAS4Q8N2W9 510 aaPredicted RBP15.2■□□□□ 0.02
CLVS1-206ENST00000520712 PPP6R1Q9UPN7 881 aa14.82□□□□□ -0.04
CLVS1-206ENST00000520712 ADRA2BP18089 450 aa14.81□□□□□ -0.04
CLVS1-206ENST00000520712 CACNB1Q02641 598 aaPredicted RBP13.79□□□□□ -0.2
CLVS1-206ENST00000520712 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
CLVS1-206ENST00000520712 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
CLVS1-206ENST00000520712 SCAF1Q9H7N4 1312 aaKnown RBP13.68□□□□□ -0.22
CLVS1-206ENST00000520712 PPP4R3CPQ6ZMV5 832 aa13.66□□□□□ -0.22
CLVS1-206ENST00000520712 DCAF8L1A6NGE4 600 aa13.34□□□□□ -0.27
CLVS1-206ENST00000520712 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
CLVS1-206ENST00000520712 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
CLVS1-206ENST00000520712 KCNA4P22459 653 aa13.21□□□□□ -0.29
CLVS1-206ENST00000520712 RNF39Q9H2S5 420 aa13.21□□□□□ -0.29
CLVS1-206ENST00000520712 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
CLVS1-206ENST00000520712 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
CLVS1-206ENST00000520712 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
CLVS1-206ENST00000520712 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
CLVS1-206ENST00000520712 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
CLVS1-206ENST00000520712 POTEHQ6S545 545 aa12.61□□□□□ -0.39
CLVS1-206ENST00000520712 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
CLVS1-206ENST00000520712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLVS1-206ENST00000520712 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
CLVS1-206ENST00000520712 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
CLVS1-206ENST00000520712 CAPN15O75808 1086 aa12.17□□□□□ -0.46
CLVS1-206ENST00000520712 DSG3P32926 999 aa12.16□□□□□ -0.46
CLVS1-206ENST00000520712 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
CLVS1-206ENST00000520712 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
CLVS1-206ENST00000520712 ZBTB22O15209 634 aa12.11□□□□□ -0.47
CLVS1-206ENST00000520712 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
CLVS1-206ENST00000520712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.09□□□□□ -0.47
CLVS1-206ENST00000520712 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
CLVS1-206ENST00000520712 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
CLVS1-206ENST00000520712 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
CLVS1-206ENST00000520712 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
CLVS1-206ENST00000520712 APLP2Q06481 763 aa12□□□□□ -0.49
CLVS1-206ENST00000520712 ATXN8OSP0DMR3 200 aa11.85□□□□□ -0.51
CLVS1-206ENST00000520712 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
CLVS1-206ENST00000520712 ABCB7O75027 752 aa11.8□□□□□ -0.52
CLVS1-206ENST00000520712 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
CLVS1-206ENST00000520712 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
CLVS1-206ENST00000520712 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.53
CLVS1-206ENST00000520712 CHRDL2Q6WN34 429 aa11.65□□□□□ -0.54
CLVS1-206ENST00000520712 POLA2Q14181 598 aa11.57□□□□□ -0.56
CLVS1-206ENST00000520712 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
CLVS1-206ENST00000520712 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
CLVS1-206ENST00000520712 FBLN2P98095 1184 aa11.33□□□□□ -0.6
CLVS1-206ENST00000520712 AKT1S1Q96B36 256 aa11.27□□□□□ -0.61
CLVS1-206ENST00000520712 HAX1O00165 279 aa11.25□□□□□ -0.61
CLVS1-206ENST00000520712 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
CLVS1-206ENST00000520712 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
CLVS1-206ENST00000520712 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
CLVS1-206ENST00000520712 OSCARQ8IYS5 282 aa11.11□□□□□ -0.63
CLVS1-206ENST00000520712 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
CLVS1-206ENST00000520712 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
CLVS1-206ENST00000520712 SPDYE2Q495Y8 402 aa11.07□□□□□ -0.64
CLVS1-206ENST00000520712 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
CLVS1-206ENST00000520712 FXR2P51116 673 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLVS1-206ENST00000520712 ZNF692Q9BU19 519 aaPredicted RBP11.03□□□□□ -0.64
CLVS1-206ENST00000520712 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
CLVS1-206ENST00000520712 EVX2Q03828 476 aa10.94□□□□□ -0.66
CLVS1-206ENST00000520712 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
CLVS1-206ENST00000520712 FKBP8Q14318 412 aa10.9□□□□□ -0.66
CLVS1-206ENST00000520712 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLVS1-206ENST00000520712 LHX8Q68G74 356 aa10.83□□□□□ -0.68
CLVS1-206ENST00000520712 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
CLVS1-206ENST00000520712 SPDYE1Q8NFV5 336 aaPredicted RBP10.77□□□□□ -0.69
CLVS1-206ENST00000520712 PROM2Q8N271 834 aa10.76□□□□□ -0.69
CLVS1-206ENST00000520712 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
CLVS1-206ENST00000520712 GABBR2O75899 941 aa10.72□□□□□ -0.69
CLVS1-206ENST00000520712 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
CLVS1-206ENST00000520712 PLSCR2Q9NRY7 297 aa10.71□□□□□ -0.69
CLVS1-206ENST00000520712 CLEC11AQ9Y240 323 aa10.71□□□□□ -0.69
CLVS1-206ENST00000520712 PRR29P0C7W0 189 aa10.63□□□□□ -0.71
CLVS1-206ENST00000520712 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
CLVS1-206ENST00000520712 CHADLQ6NUI6 762 aa10.5□□□□□ -0.73
CLVS1-206ENST00000520712 MIER1Q8N108 512 aa10.47□□□□□ -0.73
CLVS1-206ENST00000520712 PLEKHG5O94827 1062 aa10.46□□□□□ -0.73
CLVS1-206ENST00000520712 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
CLVS1-206ENST00000520712 PLCD3Q8N3E9 789 aa10.43□□□□□ -0.74
CLVS1-206ENST00000520712 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
CLVS1-206ENST00000520712 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
CLVS1-206ENST00000520712 CLCN6P51797 869 aa10.4□□□□□ -0.74
CLVS1-206ENST00000520712 VASPP50552 380 aaPredicted RBP10.39□□□□□ -0.75
CLVS1-206ENST00000520712 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
CLVS1-206ENST00000520712 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
CLVS1-206ENST00000520712 FARP1Q9Y4F1 1045 aaPredicted RBP10.34□□□□□ -0.75
CLVS1-206ENST00000520712 NPM1P06748 294 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLVS1-206ENST00000520712 MNX1P50219 401 aaPredicted RBP10.29□□□□□ -0.76
CLVS1-206ENST00000520712 KLHL34Q8N239 644 aa10.29□□□□□ -0.76
CLVS1-206ENST00000520712 IFNLR1Q8IU57 520 aaPredicted RBP10.24□□□□□ -0.77
CLVS1-206ENST00000520712 POTEMA6NI47 508 aa10.23□□□□□ -0.77
CLVS1-206ENST00000520712 OTUD5Q96G74 571 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms