RNA–Protein interactions for RNA: ENST00000520693.5

CDKL3-205, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2

Gene CDKL3, Length 1,417 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-205ENST00000520693 AEBP2Q6ZN18 517 aaPredicted RBP28.43■■■□□ 2.14
CDKL3-205ENST00000520693 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
CDKL3-205ENST00000520693 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
CDKL3-205ENST00000520693 PHF23Q9BUL5 403 aaPredicted RBP23.97■■□□□ 1.43
CDKL3-205ENST00000520693 FOXD1Q16676 465 aa22.62■■□□□ 1.21
CDKL3-205ENST00000520693 PLPPR3Q6T4P5 718 aa21.67■■□□□ 1.06
CDKL3-205ENST00000520693 MSH5O43196 834 aa21.23■□□□□ 0.99
CDKL3-205ENST00000520693 PIAS4Q8N2W9 510 aaPredicted RBP21.14■□□□□ 0.98
CDKL3-205ENST00000520693 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
CDKL3-205ENST00000520693 ADRA2BP18089 450 aa21.06■□□□□ 0.96
CDKL3-205ENST00000520693 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
CDKL3-205ENST00000520693 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
CDKL3-205ENST00000520693 MAPK8IP2Q13387 824 aaPredicted RBP19.32■□□□□ 0.68
CDKL3-205ENST00000520693 DMRT2Q9Y5R5 561 aa19.29■□□□□ 0.68
CDKL3-205ENST00000520693 PPP4R3CPQ6ZMV5 832 aa18.97■□□□□ 0.63
CDKL3-205ENST00000520693 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
CDKL3-205ENST00000520693 HOXD11P31277 338 aaPredicted RBP18.6■□□□□ 0.57
CDKL3-205ENST00000520693 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
CDKL3-205ENST00000520693 DCAF8L1A6NGE4 600 aa18.42■□□□□ 0.54
CDKL3-205ENST00000520693 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
CDKL3-205ENST00000520693 CACNB1Q02641 598 aaPredicted RBP18.15■□□□□ 0.5
CDKL3-205ENST00000520693 RNF39Q9H2S5 420 aa18.08■□□□□ 0.49
CDKL3-205ENST00000520693 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
CDKL3-205ENST00000520693 NPM3O75607 178 aaKnown RBP17.97■□□□□ 0.47
CDKL3-205ENST00000520693 C1QBPQ07021 282 aaKnown RBP17.86■□□□□ 0.45
CDKL3-205ENST00000520693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.68■□□□□ 0.42
CDKL3-205ENST00000520693 KCNA4P22459 653 aa17.61■□□□□ 0.41
CDKL3-205ENST00000520693 U3KPZ7 1027 aaPredicted RBP17.3■□□□□ 0.36
CDKL3-205ENST00000520693 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
CDKL3-205ENST00000520693 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.31
CDKL3-205ENST00000520693 CAPN15O75808 1086 aa17.01■□□□□ 0.31
CDKL3-205ENST00000520693 APLP2Q06481 763 aa16.94■□□□□ 0.3
CDKL3-205ENST00000520693 DSG3P32926 999 aa16.93■□□□□ 0.3
CDKL3-205ENST00000520693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
CDKL3-205ENST00000520693 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
CDKL3-205ENST00000520693 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
CDKL3-205ENST00000520693 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
CDKL3-205ENST00000520693 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
CDKL3-205ENST00000520693 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
CDKL3-205ENST00000520693 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
CDKL3-205ENST00000520693 ABCB7O75027 752 aa16.58■□□□□ 0.24
CDKL3-205ENST00000520693 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
CDKL3-205ENST00000520693 POLA2Q14181 598 aa16.3■□□□□ 0.2
CDKL3-205ENST00000520693 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
CDKL3-205ENST00000520693 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
CDKL3-205ENST00000520693 ZBTB22O15209 634 aa16.18■□□□□ 0.18
CDKL3-205ENST00000520693 POTEHQ6S545 545 aa16.18■□□□□ 0.18
CDKL3-205ENST00000520693 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
CDKL3-205ENST00000520693 ATXN8OSP0DMR3 200 aa16.03■□□□□ 0.16
CDKL3-205ENST00000520693 AKT1S1Q96B36 256 aa15.83■□□□□ 0.12
CDKL3-205ENST00000520693 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
CDKL3-205ENST00000520693 OSCARQ8IYS5 282 aa15.77■□□□□ 0.11
CDKL3-205ENST00000520693 FBLN2P98095 1184 aa15.65■□□□□ 0.1
CDKL3-205ENST00000520693 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
CDKL3-205ENST00000520693 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
CDKL3-205ENST00000520693 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
CDKL3-205ENST00000520693 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
CDKL3-205ENST00000520693 MKRN4PQ13434 485 aaPredicted RBP15.47■□□□□ 0.07
CDKL3-205ENST00000520693 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
CDKL3-205ENST00000520693 PITPNM1O00562 1244 aa15.46■□□□□ 0.07
CDKL3-205ENST00000520693 PIP4P2Q8N4L2 257 aa15.42■□□□□ 0.06
CDKL3-205ENST00000520693 FXR2P51116 673 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDKL3-205ENST00000520693 SSUH2Q9Y2M2 353 aa15.33■□□□□ 0.04
CDKL3-205ENST00000520693 ZNF692Q9BU19 519 aaPredicted RBP15.32■□□□□ 0.04
CDKL3-205ENST00000520693 SPDYE1Q8NFV5 336 aaPredicted RBP15.26■□□□□ 0.03
CDKL3-205ENST00000520693 EHMT2Q96KQ7 1210 aa15.23■□□□□ 0.03
CDKL3-205ENST00000520693 SP7Q8TDD2 431 aaPredicted RBP15.18■□□□□ 0.02
CDKL3-205ENST00000520693 CLEC11AQ9Y240 323 aa15.17■□□□□ 0.02
CDKL3-205ENST00000520693 HAX1O00165 279 aa15.11■□□□□ 0.01
CDKL3-205ENST00000520693 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
CDKL3-205ENST00000520693 PRKAR2AP13861 404 aaKnown RBP15.06■□□□□ 0
CDKL3-205ENST00000520693 PRR29P0C7W0 189 aa14.96□□□□□ -0.01
CDKL3-205ENST00000520693 EVX2Q03828 476 aa14.89□□□□□ -0.03
CDKL3-205ENST00000520693 C19orf67A6NJJ6 358 aa14.86□□□□□ -0.03
CDKL3-205ENST00000520693 CHADLQ6NUI6 762 aa14.85□□□□□ -0.03
CDKL3-205ENST00000520693 SPDYE4A6NLX3 237 aa14.77□□□□□ -0.04
CDKL3-205ENST00000520693 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
CDKL3-205ENST00000520693 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
CDKL3-205ENST00000520693 GABBR2O75899 941 aa14.61□□□□□ -0.07
CDKL3-205ENST00000520693 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
CDKL3-205ENST00000520693 CREBZFQ9NS37 354 aa14.58□□□□□ -0.08
CDKL3-205ENST00000520693 CLCN6P51797 869 aa14.51□□□□□ -0.09
CDKL3-205ENST00000520693 PROM2Q8N271 834 aa14.47□□□□□ -0.09
CDKL3-205ENST00000520693 ZNF579Q8NAF0 562 aaKnown RBP14.41□□□□□ -0.1
CDKL3-205ENST00000520693 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
CDKL3-205ENST00000520693 NPM1P06748 294 aaKnown RBP eCLIP14.36□□□□□ -0.11
CDKL3-205ENST00000520693 MNX1P50219 401 aaPredicted RBP14.34□□□□□ -0.11
CDKL3-205ENST00000520693 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
CDKL3-205ENST00000520693 POTEIP0CG38 1075 aa14.27□□□□□ -0.12
CDKL3-205ENST00000520693 DCBLD2Q96PD2 775 aa14.24□□□□□ -0.13
CDKL3-205ENST00000520693 LHX8Q68G74 356 aa14.23□□□□□ -0.13
CDKL3-205ENST00000520693 GALR2O43603 387 aaPredicted RBP14.16□□□□□ -0.14
CDKL3-205ENST00000520693 PHF12Q96QT6 1004 aa14.15□□□□□ -0.14
CDKL3-205ENST00000520693 PLEKHG5O94827 1062 aa14.14□□□□□ -0.15
CDKL3-205ENST00000520693 MIER1Q8N108 512 aa14.08□□□□□ -0.15
CDKL3-205ENST00000520693 FKBP8Q14318 412 aa14.03□□□□□ -0.16
CDKL3-205ENST00000520693 TSPYL2Q9H2G4 693 aaPredicted RBP14.03□□□□□ -0.16
CDKL3-205ENST00000520693 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
CDKL3-205ENST00000520693 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
CDKL3-205ENST00000520693 PLCD3Q8N3E9 789 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms