RNA–Protein interactions for RNA: ENST00000520592.1

CDKL3-204, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 652 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-204ENST00000520592 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
CDKL3-204ENST00000520592 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
CDKL3-204ENST00000520592 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
CDKL3-204ENST00000520592 PHF23Q9BUL5 403 aaPredicted RBP18.87■□□□□ 0.61
CDKL3-204ENST00000520592 FOXD1Q16676 465 aa17.95■□□□□ 0.46
CDKL3-204ENST00000520592 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
CDKL3-204ENST00000520592 MSH5O43196 834 aa16.95■□□□□ 0.3
CDKL3-204ENST00000520592 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
CDKL3-204ENST00000520592 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
CDKL3-204ENST00000520592 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
CDKL3-204ENST00000520592 ADRA2BP18089 450 aa16.33■□□□□ 0.2
CDKL3-204ENST00000520592 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
CDKL3-204ENST00000520592 MAPK8IP2Q13387 824 aaPredicted RBP15.14■□□□□ 0.01
CDKL3-204ENST00000520592 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
CDKL3-204ENST00000520592 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
CDKL3-204ENST00000520592 DCAF8L1A6NGE4 600 aa14.46□□□□□ -0.09
CDKL3-204ENST00000520592 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
CDKL3-204ENST00000520592 HOXD11P31277 338 aaPredicted RBP14.43□□□□□ -0.1
CDKL3-204ENST00000520592 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
CDKL3-204ENST00000520592 C1QBPQ07021 282 aaKnown RBP14.19□□□□□ -0.14
CDKL3-204ENST00000520592 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
CDKL3-204ENST00000520592 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
CDKL3-204ENST00000520592 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
CDKL3-204ENST00000520592 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDKL3-204ENST00000520592 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
CDKL3-204ENST00000520592 POTEHQ6S545 545 aa13.48□□□□□ -0.25
CDKL3-204ENST00000520592 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
CDKL3-204ENST00000520592 U3KPZ7 1027 aaPredicted RBP13.39□□□□□ -0.27
CDKL3-204ENST00000520592 DSG3P32926 999 aa13.37□□□□□ -0.27
CDKL3-204ENST00000520592 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
CDKL3-204ENST00000520592 CAPN15O75808 1086 aa13.28□□□□□ -0.28
CDKL3-204ENST00000520592 SLC4A2P04920 1241 aa13□□□□□ -0.33
CDKL3-204ENST00000520592 TRHP20396 242 aaPredicted RBP12.95□□□□□ -0.34
CDKL3-204ENST00000520592 ABCB7O75027 752 aa12.94□□□□□ -0.34
CDKL3-204ENST00000520592 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
CDKL3-204ENST00000520592 APLP2Q06481 763 aa12.93□□□□□ -0.34
CDKL3-204ENST00000520592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
CDKL3-204ENST00000520592 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
CDKL3-204ENST00000520592 KCNA4P22459 653 aa12.8□□□□□ -0.36
CDKL3-204ENST00000520592 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
CDKL3-204ENST00000520592 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
CDKL3-204ENST00000520592 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
CDKL3-204ENST00000520592 POLA2Q14181 598 aa12.53□□□□□ -0.4
CDKL3-204ENST00000520592 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
CDKL3-204ENST00000520592 SP7Q8TDD2 431 aaPredicted RBP12.42□□□□□ -0.42
CDKL3-204ENST00000520592 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
CDKL3-204ENST00000520592 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
CDKL3-204ENST00000520592 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
CDKL3-204ENST00000520592 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
CDKL3-204ENST00000520592 ATF5Q9Y2D1 282 aaPredicted RBP12.22□□□□□ -0.45
CDKL3-204ENST00000520592 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
CDKL3-204ENST00000520592 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDKL3-204ENST00000520592 HAX1O00165 279 aa12.12□□□□□ -0.47
CDKL3-204ENST00000520592 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
CDKL3-204ENST00000520592 FOXD4L1Q9NU39 408 aa12.08□□□□□ -0.48
CDKL3-204ENST00000520592 EVX2Q03828 476 aa11.99□□□□□ -0.49
CDKL3-204ENST00000520592 SLC4A1APQ9BWU0 796 aaKnown RBP11.96□□□□□ -0.49
CDKL3-204ENST00000520592 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
CDKL3-204ENST00000520592 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
CDKL3-204ENST00000520592 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
CDKL3-204ENST00000520592 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
CDKL3-204ENST00000520592 PRKAR2AP13861 404 aaKnown RBP11.78□□□□□ -0.52
CDKL3-204ENST00000520592 ZBTB22O15209 634 aa11.77□□□□□ -0.53
CDKL3-204ENST00000520592 C19orf67A6NJJ6 358 aa11.76□□□□□ -0.53
CDKL3-204ENST00000520592 FBLN2P98095 1184 aa11.73□□□□□ -0.53
CDKL3-204ENST00000520592 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
CDKL3-204ENST00000520592 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
CDKL3-204ENST00000520592 GABBR2O75899 941 aa11.68□□□□□ -0.54
CDKL3-204ENST00000520592 MKRN4PQ13434 485 aaPredicted RBP11.65□□□□□ -0.54
CDKL3-204ENST00000520592 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
CDKL3-204ENST00000520592 LHX8Q68G74 356 aa11.64□□□□□ -0.55
CDKL3-204ENST00000520592 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
CDKL3-204ENST00000520592 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
CDKL3-204ENST00000520592 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
CDKL3-204ENST00000520592 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
CDKL3-204ENST00000520592 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
CDKL3-204ENST00000520592 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
CDKL3-204ENST00000520592 CLCN6P51797 869 aa11.35□□□□□ -0.59
CDKL3-204ENST00000520592 FARP1Q9Y4F1 1045 aaPredicted RBP11.35□□□□□ -0.59
CDKL3-204ENST00000520592 DCBLD2Q96PD2 775 aa11.23□□□□□ -0.61
CDKL3-204ENST00000520592 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
CDKL3-204ENST00000520592 PLSCR2Q9NRY7 297 aa11.21□□□□□ -0.61
CDKL3-204ENST00000520592 ZRANB1Q9UGI0 708 aa11.15□□□□□ -0.62
CDKL3-204ENST00000520592 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
CDKL3-204ENST00000520592 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
CDKL3-204ENST00000520592 GALR2O43603 387 aaPredicted RBP11.1□□□□□ -0.63
CDKL3-204ENST00000520592 POTEB2H3BUK9 544 aa11.07□□□□□ -0.64
CDKL3-204ENST00000520592 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
CDKL3-204ENST00000520592 POTEMA6NI47 508 aa10.97□□□□□ -0.65
CDKL3-204ENST00000520592 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
CDKL3-204ENST00000520592 PELP1Q8IZL8 1130 aaKnown RBP10.95□□□□□ -0.66
CDKL3-204ENST00000520592 PAK3O75914 559 aaPredicted RBP10.93□□□□□ -0.66
CDKL3-204ENST00000520592 POTEGQ6S5H5 508 aa10.92□□□□□ -0.66
CDKL3-204ENST00000520592 MNX1P50219 401 aaPredicted RBP10.89□□□□□ -0.67
CDKL3-204ENST00000520592 ASTLQ6HA08 431 aaPredicted RBP10.86□□□□□ -0.67
CDKL3-204ENST00000520592 NPM1P06748 294 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDKL3-204ENST00000520592 POTEJP0CG39 1038 aa10.84□□□□□ -0.67
CDKL3-204ENST00000520592 PCDH10Q9P2E7 1040 aa10.84□□□□□ -0.67
CDKL3-204ENST00000520592 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
CDKL3-204ENST00000520592 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms