RNA–Protein interactions for RNA: ENST00000519639.5

RMDN1-210, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 3

Gene RMDN1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-210ENST00000519639 AEBP2Q6ZN18 517 aaPredicted RBP29.61■■■□□ 2.33
RMDN1-210ENST00000519639 CHIC1Q5VXU3 224 aa27.94■■■□□ 2.06
RMDN1-210ENST00000519639 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
RMDN1-210ENST00000519639 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.58
RMDN1-210ENST00000519639 FOXD1Q16676 465 aa23.6■■□□□ 1.37
RMDN1-210ENST00000519639 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
RMDN1-210ENST00000519639 MSH5O43196 834 aa22.16■■□□□ 1.14
RMDN1-210ENST00000519639 PIAS4Q8N2W9 510 aaPredicted RBP22.03■■□□□ 1.12
RMDN1-210ENST00000519639 POTEDQ86YR6 584 aa21.95■■□□□ 1.1
RMDN1-210ENST00000519639 PPP6R1Q9UPN7 881 aa21.93■■□□□ 1.1
RMDN1-210ENST00000519639 ADRA2BP18089 450 aa21.86■■□□□ 1.09
RMDN1-210ENST00000519639 MAPK8IP2Q13387 824 aaPredicted RBP20.14■□□□□ 0.81
RMDN1-210ENST00000519639 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
RMDN1-210ENST00000519639 SCAF1Q9H7N4 1312 aaKnown RBP20.01■□□□□ 0.79
RMDN1-210ENST00000519639 PPP4R3CPQ6ZMV5 832 aa19.49■□□□□ 0.71
RMDN1-210ENST00000519639 DCAF8L1A6NGE4 600 aa19.29■□□□□ 0.68
RMDN1-210ENST00000519639 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
RMDN1-210ENST00000519639 CACNB1Q02641 598 aaPredicted RBP19.16■□□□□ 0.66
RMDN1-210ENST00000519639 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
RMDN1-210ENST00000519639 RNF216Q9NWF9 866 aaPredicted RBP19.02■□□□□ 0.64
RMDN1-210ENST00000519639 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
RMDN1-210ENST00000519639 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
RMDN1-210ENST00000519639 C1QBPQ07021 282 aaKnown RBP18.6■□□□□ 0.57
RMDN1-210ENST00000519639 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
RMDN1-210ENST00000519639 NPM3O75607 178 aaKnown RBP18.41■□□□□ 0.54
RMDN1-210ENST00000519639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.53
RMDN1-210ENST00000519639 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
RMDN1-210ENST00000519639 KCNA4P22459 653 aa17.9■□□□□ 0.46
RMDN1-210ENST00000519639 CAPN15O75808 1086 aa17.73■□□□□ 0.43
RMDN1-210ENST00000519639 SPINK5Q9NQ38 1064 aaPredicted RBP17.73■□□□□ 0.43
RMDN1-210ENST00000519639 DSG3P32926 999 aa17.63■□□□□ 0.41
RMDN1-210ENST00000519639 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
RMDN1-210ENST00000519639 APLP2Q06481 763 aa17.41■□□□□ 0.38
RMDN1-210ENST00000519639 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
RMDN1-210ENST00000519639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.35■□□□□ 0.37
RMDN1-210ENST00000519639 HNRNPUL2Q1KMD3 747 aaKnown RBP17.35■□□□□ 0.37
RMDN1-210ENST00000519639 ZNF219Q9P2Y4 722 aaPredicted RBP17.33■□□□□ 0.36
RMDN1-210ENST00000519639 ABCB7O75027 752 aa17.3■□□□□ 0.36
RMDN1-210ENST00000519639 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
RMDN1-210ENST00000519639 POTEHQ6S545 545 aa17.17■□□□□ 0.34
RMDN1-210ENST00000519639 MYCNP04198 464 aaPredicted RBP17.03■□□□□ 0.32
RMDN1-210ENST00000519639 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
RMDN1-210ENST00000519639 POLA2Q14181 598 aa16.87■□□□□ 0.29
RMDN1-210ENST00000519639 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
RMDN1-210ENST00000519639 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
RMDN1-210ENST00000519639 ATF5Q9Y2D1 282 aaPredicted RBP16.65■□□□□ 0.26
RMDN1-210ENST00000519639 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
RMDN1-210ENST00000519639 ZBTB12Q9Y330 459 aaPredicted RBP16.51■□□□□ 0.23
RMDN1-210ENST00000519639 ZBTB22O15209 634 aa16.43■□□□□ 0.22
RMDN1-210ENST00000519639 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
RMDN1-210ENST00000519639 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
RMDN1-210ENST00000519639 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
RMDN1-210ENST00000519639 ATXN8OSP0DMR3 200 aa16.24■□□□□ 0.19
RMDN1-210ENST00000519639 PIP4P2Q8N4L2 257 aa16.11■□□□□ 0.17
RMDN1-210ENST00000519639 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
RMDN1-210ENST00000519639 FBLN2P98095 1184 aa16.05■□□□□ 0.16
RMDN1-210ENST00000519639 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
RMDN1-210ENST00000519639 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
RMDN1-210ENST00000519639 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
RMDN1-210ENST00000519639 FXR2P51116 673 aaKnown RBP eCLIP15.97■□□□□ 0.15
RMDN1-210ENST00000519639 SPDYE2Q495Y8 402 aa15.97■□□□□ 0.15
RMDN1-210ENST00000519639 HAX1O00165 279 aa15.9■□□□□ 0.14
RMDN1-210ENST00000519639 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
RMDN1-210ENST00000519639 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
RMDN1-210ENST00000519639 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
RMDN1-210ENST00000519639 SPDYE1Q8NFV5 336 aaPredicted RBP15.75■□□□□ 0.11
RMDN1-210ENST00000519639 SSUH2Q9Y2M2 353 aa15.73■□□□□ 0.11
RMDN1-210ENST00000519639 PRKAR2AP13861 404 aaKnown RBP15.68■□□□□ 0.1
RMDN1-210ENST00000519639 EVX2Q03828 476 aa15.66■□□□□ 0.1
RMDN1-210ENST00000519639 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
RMDN1-210ENST00000519639 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
RMDN1-210ENST00000519639 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
RMDN1-210ENST00000519639 PRR29P0C7W0 189 aa15.47■□□□□ 0.07
RMDN1-210ENST00000519639 C19orf67A6NJJ6 358 aa15.46■□□□□ 0.07
RMDN1-210ENST00000519639 GABBR2O75899 941 aa15.29■□□□□ 0.04
RMDN1-210ENST00000519639 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
RMDN1-210ENST00000519639 FARP1Q9Y4F1 1045 aaPredicted RBP15.21■□□□□ 0.03
RMDN1-210ENST00000519639 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
RMDN1-210ENST00000519639 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
RMDN1-210ENST00000519639 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
RMDN1-210ENST00000519639 LHX8Q68G74 356 aa15.02■□□□□ -0
RMDN1-210ENST00000519639 CREBZFQ9NS37 354 aa15.02■□□□□ -0
RMDN1-210ENST00000519639 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
RMDN1-210ENST00000519639 CLCN6P51797 869 aa14.96□□□□□ -0.01
RMDN1-210ENST00000519639 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
RMDN1-210ENST00000519639 ZNF579Q8NAF0 562 aaKnown RBP14.91□□□□□ -0.02
RMDN1-210ENST00000519639 DCBLD2Q96PD2 775 aa14.88□□□□□ -0.03
RMDN1-210ENST00000519639 PAK3O75914 559 aaPredicted RBP14.79□□□□□ -0.04
RMDN1-210ENST00000519639 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
RMDN1-210ENST00000519639 NPM1P06748 294 aaKnown RBP eCLIP14.75□□□□□ -0.05
RMDN1-210ENST00000519639 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
RMDN1-210ENST00000519639 PHF12Q96QT6 1004 aa14.71□□□□□ -0.05
RMDN1-210ENST00000519639 PROM2Q8N271 834 aa14.6□□□□□ -0.07
RMDN1-210ENST00000519639 TSPYL2Q9H2G4 693 aaPredicted RBP14.51□□□□□ -0.09
RMDN1-210ENST00000519639 MS4A3Q96HJ5 214 aa14.5□□□□□ -0.09
RMDN1-210ENST00000519639 PELP1Q8IZL8 1130 aaKnown RBP14.48□□□□□ -0.09
RMDN1-210ENST00000519639 POTEB2H3BUK9 544 aa14.47□□□□□ -0.09
RMDN1-210ENST00000519639 OTUD5Q96G74 571 aa14.45□□□□□ -0.1
RMDN1-210ENST00000519639 ASTLQ6HA08 431 aaPredicted RBP14.42□□□□□ -0.1
RMDN1-210ENST00000519639 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms