RNA–Protein interactions for RNA: ENST00000519425.1

EFCAB1-203, Transcript of EF-hand calcium binding domain 1, humanhuman

TSL 2

Gene EFCAB1, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB1-203ENST00000519425 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
EFCAB1-203ENST00000519425 CHIC1Q5VXU3 224 aa25.72■■□□□ 1.71
EFCAB1-203ENST00000519425 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
EFCAB1-203ENST00000519425 PHF23Q9BUL5 403 aaPredicted RBP22.58■■□□□ 1.21
EFCAB1-203ENST00000519425 FOXD1Q16676 465 aa21.09■□□□□ 0.97
EFCAB1-203ENST00000519425 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
EFCAB1-203ENST00000519425 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
EFCAB1-203ENST00000519425 ADRA2BP18089 450 aa20.03■□□□□ 0.8
EFCAB1-203ENST00000519425 PIAS4Q8N2W9 510 aaPredicted RBP19.85■□□□□ 0.77
EFCAB1-203ENST00000519425 MSH5O43196 834 aa19.59■□□□□ 0.73
EFCAB1-203ENST00000519425 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
EFCAB1-203ENST00000519425 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
EFCAB1-203ENST00000519425 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
EFCAB1-203ENST00000519425 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
EFCAB1-203ENST00000519425 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
EFCAB1-203ENST00000519425 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
EFCAB1-203ENST00000519425 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
EFCAB1-203ENST00000519425 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
EFCAB1-203ENST00000519425 RNF216Q9NWF9 866 aaPredicted RBP17.53■□□□□ 0.4
EFCAB1-203ENST00000519425 KCNA4P22459 653 aa17.47■□□□□ 0.39
EFCAB1-203ENST00000519425 NPM3O75607 178 aaKnown RBP17.42■□□□□ 0.38
EFCAB1-203ENST00000519425 DCAF8L1A6NGE4 600 aa17.38■□□□□ 0.37
EFCAB1-203ENST00000519425 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
EFCAB1-203ENST00000519425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.28
EFCAB1-203ENST00000519425 RNF39Q9H2S5 420 aa16.74■□□□□ 0.27
EFCAB1-203ENST00000519425 CACNB1Q02641 598 aaPredicted RBP16.59■□□□□ 0.25
EFCAB1-203ENST00000519425 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
EFCAB1-203ENST00000519425 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
EFCAB1-203ENST00000519425 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
EFCAB1-203ENST00000519425 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
EFCAB1-203ENST00000519425 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
EFCAB1-203ENST00000519425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
EFCAB1-203ENST00000519425 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
EFCAB1-203ENST00000519425 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
EFCAB1-203ENST00000519425 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
EFCAB1-203ENST00000519425 ZBTB22O15209 634 aa16.06■□□□□ 0.16
EFCAB1-203ENST00000519425 CAPN15O75808 1086 aa16.06■□□□□ 0.16
EFCAB1-203ENST00000519425 SAMD1Q6SPF0 538 aaPredicted RBP16.05■□□□□ 0.16
EFCAB1-203ENST00000519425 APLP2Q06481 763 aa16.04■□□□□ 0.16
EFCAB1-203ENST00000519425 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
EFCAB1-203ENST00000519425 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
EFCAB1-203ENST00000519425 DSG3P32926 999 aa15.82■□□□□ 0.12
EFCAB1-203ENST00000519425 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
EFCAB1-203ENST00000519425 ABCB7O75027 752 aa15.74■□□□□ 0.11
EFCAB1-203ENST00000519425 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
EFCAB1-203ENST00000519425 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
EFCAB1-203ENST00000519425 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
EFCAB1-203ENST00000519425 POLA2Q14181 598 aa15.56■□□□□ 0.08
EFCAB1-203ENST00000519425 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
EFCAB1-203ENST00000519425 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
EFCAB1-203ENST00000519425 FBLN2P98095 1184 aa15.09■□□□□ 0.01
EFCAB1-203ENST00000519425 OSCARQ8IYS5 282 aa15.06■□□□□ 0
EFCAB1-203ENST00000519425 MKRN4PQ13434 485 aaPredicted RBP14.99□□□□□ -0.01
EFCAB1-203ENST00000519425 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
EFCAB1-203ENST00000519425 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
EFCAB1-203ENST00000519425 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
EFCAB1-203ENST00000519425 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
EFCAB1-203ENST00000519425 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
EFCAB1-203ENST00000519425 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
EFCAB1-203ENST00000519425 SSUH2Q9Y2M2 353 aa14.66□□□□□ -0.06
EFCAB1-203ENST00000519425 CHRDL2Q6WN34 429 aa14.61□□□□□ -0.07
EFCAB1-203ENST00000519425 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
EFCAB1-203ENST00000519425 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
EFCAB1-203ENST00000519425 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
EFCAB1-203ENST00000519425 POTEHQ6S545 545 aa14.52□□□□□ -0.09
EFCAB1-203ENST00000519425 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
EFCAB1-203ENST00000519425 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.09
EFCAB1-203ENST00000519425 PIP4P2Q8N4L2 257 aa14.35□□□□□ -0.11
EFCAB1-203ENST00000519425 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
EFCAB1-203ENST00000519425 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
EFCAB1-203ENST00000519425 FKBP8Q14318 412 aa14.25□□□□□ -0.13
EFCAB1-203ENST00000519425 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
EFCAB1-203ENST00000519425 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
EFCAB1-203ENST00000519425 PROM2Q8N271 834 aa14.18□□□□□ -0.14
EFCAB1-203ENST00000519425 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
EFCAB1-203ENST00000519425 HAX1O00165 279 aa14.01□□□□□ -0.17
EFCAB1-203ENST00000519425 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
EFCAB1-203ENST00000519425 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
EFCAB1-203ENST00000519425 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
EFCAB1-203ENST00000519425 MIER1Q8N108 512 aa13.83□□□□□ -0.2
EFCAB1-203ENST00000519425 EVX2Q03828 476 aa13.82□□□□□ -0.2
EFCAB1-203ENST00000519425 FBXO3Q9UK99 471 aa13.82□□□□□ -0.2
EFCAB1-203ENST00000519425 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
EFCAB1-203ENST00000519425 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
EFCAB1-203ENST00000519425 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
EFCAB1-203ENST00000519425 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
EFCAB1-203ENST00000519425 MNX1P50219 401 aaPredicted RBP13.77□□□□□ -0.21
EFCAB1-203ENST00000519425 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
EFCAB1-203ENST00000519425 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
EFCAB1-203ENST00000519425 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
EFCAB1-203ENST00000519425 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
EFCAB1-203ENST00000519425 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
EFCAB1-203ENST00000519425 GABBR2O75899 941 aa13.55□□□□□ -0.24
EFCAB1-203ENST00000519425 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
EFCAB1-203ENST00000519425 TSPYL2Q9H2G4 693 aaPredicted RBP13.55□□□□□ -0.24
EFCAB1-203ENST00000519425 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
EFCAB1-203ENST00000519425 RASEFQ8IZ41 740 aa13.51□□□□□ -0.25
EFCAB1-203ENST00000519425 PHF12Q96QT6 1004 aa13.49□□□□□ -0.25
EFCAB1-203ENST00000519425 NUBP1P53384 320 aa13.47□□□□□ -0.25
EFCAB1-203ENST00000519425 CLCN6P51797 869 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms