RNA–Protein interactions for RNA: ENST00000519395.5

NUDCD2-203, Transcript of NudC domain containing 2, humanhuman

TSL 5

Gene NUDCD2, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD2-203ENST00000519395 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
NUDCD2-203ENST00000519395 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
NUDCD2-203ENST00000519395 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
NUDCD2-203ENST00000519395 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
NUDCD2-203ENST00000519395 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
NUDCD2-203ENST00000519395 FOXD1Q16676 465 aa16.58■□□□□ 0.24
NUDCD2-203ENST00000519395 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
NUDCD2-203ENST00000519395 ADRA2BP18089 450 aa16.14■□□□□ 0.17
NUDCD2-203ENST00000519395 PIAS4Q8N2W9 510 aaPredicted RBP15.68■□□□□ 0.1
NUDCD2-203ENST00000519395 MSH5O43196 834 aa15.15■□□□□ 0.02
NUDCD2-203ENST00000519395 PPP4R3CPQ6ZMV5 832 aa15.04■□□□□ -0
NUDCD2-203ENST00000519395 KCNA4P22459 653 aa14.99□□□□□ -0.01
NUDCD2-203ENST00000519395 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
NUDCD2-203ENST00000519395 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
NUDCD2-203ENST00000519395 MAPK8IP2Q13387 824 aaPredicted RBP14.58□□□□□ -0.08
NUDCD2-203ENST00000519395 CNKSR2Q8WXI2 1034 aa14.55□□□□□ -0.08
NUDCD2-203ENST00000519395 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
NUDCD2-203ENST00000519395 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
NUDCD2-203ENST00000519395 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
NUDCD2-203ENST00000519395 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
NUDCD2-203ENST00000519395 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
NUDCD2-203ENST00000519395 HOXD11P31277 338 aaPredicted RBP14.1□□□□□ -0.15
NUDCD2-203ENST00000519395 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
NUDCD2-203ENST00000519395 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
NUDCD2-203ENST00000519395 ZBTB22O15209 634 aa13.81□□□□□ -0.2
NUDCD2-203ENST00000519395 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
NUDCD2-203ENST00000519395 DCAF8L1A6NGE4 600 aa13.67□□□□□ -0.22
NUDCD2-203ENST00000519395 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
NUDCD2-203ENST00000519395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
NUDCD2-203ENST00000519395 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
NUDCD2-203ENST00000519395 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
NUDCD2-203ENST00000519395 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
NUDCD2-203ENST00000519395 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
NUDCD2-203ENST00000519395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
NUDCD2-203ENST00000519395 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
NUDCD2-203ENST00000519395 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
NUDCD2-203ENST00000519395 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
NUDCD2-203ENST00000519395 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
NUDCD2-203ENST00000519395 APLP2Q06481 763 aa12.92□□□□□ -0.34
NUDCD2-203ENST00000519395 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
NUDCD2-203ENST00000519395 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
NUDCD2-203ENST00000519395 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
NUDCD2-203ENST00000519395 CAPN15O75808 1086 aa12.75□□□□□ -0.37
NUDCD2-203ENST00000519395 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
NUDCD2-203ENST00000519395 POLA2Q14181 598 aa12.59□□□□□ -0.39
NUDCD2-203ENST00000519395 ABCB7O75027 752 aa12.55□□□□□ -0.4
NUDCD2-203ENST00000519395 FKBP8Q14318 412 aa12.55□□□□□ -0.4
NUDCD2-203ENST00000519395 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
NUDCD2-203ENST00000519395 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
NUDCD2-203ENST00000519395 DSG3P32926 999 aa12.49□□□□□ -0.41
NUDCD2-203ENST00000519395 FBLN2P98095 1184 aa12.43□□□□□ -0.42
NUDCD2-203ENST00000519395 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
NUDCD2-203ENST00000519395 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
NUDCD2-203ENST00000519395 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
NUDCD2-203ENST00000519395 PROM2Q8N271 834 aa12.14□□□□□ -0.47
NUDCD2-203ENST00000519395 SPDYE2BA6NHP3 402 aa12.07□□□□□ -0.48
NUDCD2-203ENST00000519395 SPDYE6P0CI01 402 aa12.07□□□□□ -0.48
NUDCD2-203ENST00000519395 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
NUDCD2-203ENST00000519395 ZNF692Q9BU19 519 aaPredicted RBP12.06□□□□□ -0.48
NUDCD2-203ENST00000519395 SSUH2Q9Y2M2 353 aa12.03□□□□□ -0.48
NUDCD2-203ENST00000519395 FBXO3Q9UK99 471 aa12□□□□□ -0.49
NUDCD2-203ENST00000519395 PABPN1Q86U42 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
NUDCD2-203ENST00000519395 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
NUDCD2-203ENST00000519395 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
NUDCD2-203ENST00000519395 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
NUDCD2-203ENST00000519395 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
NUDCD2-203ENST00000519395 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
NUDCD2-203ENST00000519395 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
NUDCD2-203ENST00000519395 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
NUDCD2-203ENST00000519395 REM2Q8IYK8 340 aaPredicted RBP11.68□□□□□ -0.54
NUDCD2-203ENST00000519395 SPDYE1Q8NFV5 336 aaPredicted RBP11.66□□□□□ -0.54
NUDCD2-203ENST00000519395 PLCD3Q8N3E9 789 aa11.64□□□□□ -0.55
NUDCD2-203ENST00000519395 MIER1Q8N108 512 aa11.62□□□□□ -0.55
NUDCD2-203ENST00000519395 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
NUDCD2-203ENST00000519395 KLHL34Q8N239 644 aa11.59□□□□□ -0.55
NUDCD2-203ENST00000519395 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
NUDCD2-203ENST00000519395 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
NUDCD2-203ENST00000519395 PRR29P0C7W0 189 aa11.52□□□□□ -0.57
NUDCD2-203ENST00000519395 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
NUDCD2-203ENST00000519395 CREBZFQ9NS37 354 aa11.46□□□□□ -0.57
NUDCD2-203ENST00000519395 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
NUDCD2-203ENST00000519395 PKD2Q13563 968 aa11.43□□□□□ -0.58
NUDCD2-203ENST00000519395 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
NUDCD2-203ENST00000519395 NUBP1P53384 320 aa11.33□□□□□ -0.6
NUDCD2-203ENST00000519395 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
NUDCD2-203ENST00000519395 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
NUDCD2-203ENST00000519395 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
NUDCD2-203ENST00000519395 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
NUDCD2-203ENST00000519395 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.6
NUDCD2-203ENST00000519395 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
NUDCD2-203ENST00000519395 NPM1P06748 294 aaKnown RBP eCLIP11.24□□□□□ -0.61
NUDCD2-203ENST00000519395 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
NUDCD2-203ENST00000519395 GSE1Q14687 1217 aa11.23□□□□□ -0.61
NUDCD2-203ENST00000519395 DCAF8L2P0C7V8 631 aa11.22□□□□□ -0.61
NUDCD2-203ENST00000519395 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
NUDCD2-203ENST00000519395 RGL2O15211 777 aa11.21□□□□□ -0.61
NUDCD2-203ENST00000519395 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.61
NUDCD2-203ENST00000519395 PIP4P2Q8N4L2 257 aa11.21□□□□□ -0.61
NUDCD2-203ENST00000519395 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
NUDCD2-203ENST00000519395 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 214 ms