RNA–Protein interactions for RNA: ENST00000519382.1

TRAPPC2-207, Transcript of trafficking protein particle complex 2, humanhuman

TSL 2

Gene TRAPPC2, Length 1,411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-207ENST00000519382 AEBP2Q6ZN18 517 aaPredicted RBP28.69■■■□□ 2.18
TRAPPC2-207ENST00000519382 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
TRAPPC2-207ENST00000519382 PHF23Q9BUL5 403 aaPredicted RBP24.38■■□□□ 1.49
TRAPPC2-207ENST00000519382 SENP3Q9H4L4 574 aaPredicted RBP24.22■■□□□ 1.47
TRAPPC2-207ENST00000519382 FOXD1Q16676 465 aa22.62■■□□□ 1.21
TRAPPC2-207ENST00000519382 PLPPR3Q6T4P5 718 aa22.26■■□□□ 1.15
TRAPPC2-207ENST00000519382 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
TRAPPC2-207ENST00000519382 ADRA2BP18089 450 aa21.55■■□□□ 1.04
TRAPPC2-207ENST00000519382 PIAS4Q8N2W9 510 aaPredicted RBP21.21■□□□□ 0.99
TRAPPC2-207ENST00000519382 POTEDQ86YR6 584 aa20.93■□□□□ 0.94
TRAPPC2-207ENST00000519382 MSH5O43196 834 aa20.84■□□□□ 0.93
TRAPPC2-207ENST00000519382 MAPK8IP2Q13387 824 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC2-207ENST00000519382 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
TRAPPC2-207ENST00000519382 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
TRAPPC2-207ENST00000519382 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
TRAPPC2-207ENST00000519382 CNKSR2Q8WXI2 1034 aa19.1■□□□□ 0.65
TRAPPC2-207ENST00000519382 KCNA4P22459 653 aa18.93■□□□□ 0.62
TRAPPC2-207ENST00000519382 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
TRAPPC2-207ENST00000519382 HOXD11P31277 338 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC2-207ENST00000519382 RNF216Q9NWF9 866 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC2-207ENST00000519382 NPM3O75607 178 aaKnown RBP18.79■□□□□ 0.6
TRAPPC2-207ENST00000519382 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
TRAPPC2-207ENST00000519382 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
TRAPPC2-207ENST00000519382 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC2-207ENST00000519382 RNF39Q9H2S5 420 aa17.91■□□□□ 0.46
TRAPPC2-207ENST00000519382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.46
TRAPPC2-207ENST00000519382 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
TRAPPC2-207ENST00000519382 SLC4A2P04920 1241 aa17.86■□□□□ 0.45
TRAPPC2-207ENST00000519382 U3KPZ7 1027 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC2-207ENST00000519382 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
TRAPPC2-207ENST00000519382 ZBTB22O15209 634 aa17.47■□□□□ 0.39
TRAPPC2-207ENST00000519382 FOXD4L1Q9NU39 408 aa17.41■□□□□ 0.38
TRAPPC2-207ENST00000519382 MYCNP04198 464 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC2-207ENST00000519382 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC2-207ENST00000519382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC2-207ENST00000519382 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
TRAPPC2-207ENST00000519382 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC2-207ENST00000519382 CAPN15O75808 1086 aa17.13■□□□□ 0.33
TRAPPC2-207ENST00000519382 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
TRAPPC2-207ENST00000519382 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
TRAPPC2-207ENST00000519382 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC2-207ENST00000519382 APLP2Q06481 763 aa17.01■□□□□ 0.31
TRAPPC2-207ENST00000519382 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC2-207ENST00000519382 DSG3P32926 999 aa16.96■□□□□ 0.31
TRAPPC2-207ENST00000519382 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC2-207ENST00000519382 ABCB7O75027 752 aa16.85■□□□□ 0.29
TRAPPC2-207ENST00000519382 ATXN8OSP0DMR3 200 aa16.79■□□□□ 0.28
TRAPPC2-207ENST00000519382 POLA2Q14181 598 aa16.68■□□□□ 0.26
TRAPPC2-207ENST00000519382 POTEHQ6S545 545 aa16.32■□□□□ 0.2
TRAPPC2-207ENST00000519382 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC2-207ENST00000519382 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC2-207ENST00000519382 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
TRAPPC2-207ENST00000519382 FBLN2P98095 1184 aa16.11■□□□□ 0.17
TRAPPC2-207ENST00000519382 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
TRAPPC2-207ENST00000519382 SPDYE2BA6NHP3 402 aa15.85■□□□□ 0.13
TRAPPC2-207ENST00000519382 SPDYE6P0CI01 402 aa15.85■□□□□ 0.13
TRAPPC2-207ENST00000519382 SPDYE2Q495Y8 402 aa15.85■□□□□ 0.13
TRAPPC2-207ENST00000519382 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
TRAPPC2-207ENST00000519382 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC2-207ENST00000519382 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.11
TRAPPC2-207ENST00000519382 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC2-207ENST00000519382 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
TRAPPC2-207ENST00000519382 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
TRAPPC2-207ENST00000519382 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
TRAPPC2-207ENST00000519382 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
TRAPPC2-207ENST00000519382 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC2-207ENST00000519382 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
TRAPPC2-207ENST00000519382 FKBP8Q14318 412 aa15.42■□□□□ 0.06
TRAPPC2-207ENST00000519382 PROM2Q8N271 834 aa15.38■□□□□ 0.05
TRAPPC2-207ENST00000519382 PIP4P2Q8N4L2 257 aa15.36■□□□□ 0.05
TRAPPC2-207ENST00000519382 FXR2P51116 673 aaKnown RBP eCLIP15.33■□□□□ 0.04
TRAPPC2-207ENST00000519382 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
TRAPPC2-207ENST00000519382 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
TRAPPC2-207ENST00000519382 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
TRAPPC2-207ENST00000519382 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
TRAPPC2-207ENST00000519382 CREBZFQ9NS37 354 aa15.06■□□□□ 0
TRAPPC2-207ENST00000519382 SP7Q8TDD2 431 aaPredicted RBP15.04■□□□□ -0
TRAPPC2-207ENST00000519382 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC2-207ENST00000519382 MNX1P50219 401 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC2-207ENST00000519382 HAX1O00165 279 aa14.88□□□□□ -0.03
TRAPPC2-207ENST00000519382 EVX2Q03828 476 aa14.88□□□□□ -0.03
TRAPPC2-207ENST00000519382 MIER1Q8N108 512 aa14.83□□□□□ -0.03
TRAPPC2-207ENST00000519382 C19orf67A6NJJ6 358 aa14.83□□□□□ -0.04
TRAPPC2-207ENST00000519382 FBXO3Q9UK99 471 aa14.83□□□□□ -0.04
TRAPPC2-207ENST00000519382 PLCD3Q8N3E9 789 aa14.75□□□□□ -0.05
TRAPPC2-207ENST00000519382 VASPP50552 380 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC2-207ENST00000519382 CD44P16070 742 aaKnown RBP14.7□□□□□ -0.06
TRAPPC2-207ENST00000519382 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRAPPC2-207ENST00000519382 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
TRAPPC2-207ENST00000519382 ZRANB1Q9UGI0 708 aa14.58□□□□□ -0.08
TRAPPC2-207ENST00000519382 IFNLR1Q8IU57 520 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC2-207ENST00000519382 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
TRAPPC2-207ENST00000519382 NUBP1P53384 320 aa14.55□□□□□ -0.08
TRAPPC2-207ENST00000519382 ZBTB47Q9UFB7 747 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC2-207ENST00000519382 TSPYL2Q9H2G4 693 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC2-207ENST00000519382 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
TRAPPC2-207ENST00000519382 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
TRAPPC2-207ENST00000519382 GABBR2O75899 941 aa14.48□□□□□ -0.09
TRAPPC2-207ENST00000519382 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
TRAPPC2-207ENST00000519382 PAK3O75914 559 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms