RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 AEBP2Q6ZN18 517 aaPredicted RBP35.59■■■■□ 3.29
UBLCP1-202ENST00000519276 CHIC1Q5VXU3 224 aa33.36■■■□□ 2.93
UBLCP1-202ENST00000519276 SENP3Q9H4L4 574 aaPredicted RBP30.54■■■□□ 2.48
UBLCP1-202ENST00000519276 PHF23Q9BUL5 403 aaPredicted RBP30.02■■■□□ 2.4
UBLCP1-202ENST00000519276 FOXD1Q16676 465 aa28.49■■■□□ 2.15
UBLCP1-202ENST00000519276 POTEDQ86YR6 584 aa27.85■■■□□ 2.05
UBLCP1-202ENST00000519276 MSH5O43196 834 aa27.01■■□□□ 1.92
UBLCP1-202ENST00000519276 PIAS4Q8N2W9 510 aaPredicted RBP26.48■■□□□ 1.83
UBLCP1-202ENST00000519276 PLPPR3Q6T4P5 718 aa26.34■■□□□ 1.81
UBLCP1-202ENST00000519276 PPP6R1Q9UPN7 881 aa26.13■■□□□ 1.77
UBLCP1-202ENST00000519276 ADRA2BP18089 450 aa26.02■■□□□ 1.76
UBLCP1-202ENST00000519276 DMRT2Q9Y5R5 561 aa24.12■■□□□ 1.45
UBLCP1-202ENST00000519276 MAPK8IP2Q13387 824 aaPredicted RBP24.06■■□□□ 1.44
UBLCP1-202ENST00000519276 SCAF1Q9H7N4 1312 aaKnown RBP23.94■■□□□ 1.42
UBLCP1-202ENST00000519276 CACNB1Q02641 598 aaPredicted RBP23.69■■□□□ 1.38
UBLCP1-202ENST00000519276 DCAF8L1A6NGE4 600 aa23.1■■□□□ 1.29
UBLCP1-202ENST00000519276 HOXD11P31277 338 aaPredicted RBP23.01■■□□□ 1.27
UBLCP1-202ENST00000519276 PPP4R3CPQ6ZMV5 832 aa22.98■■□□□ 1.27
UBLCP1-202ENST00000519276 RNF39Q9H2S5 420 aa22.91■■□□□ 1.26
UBLCP1-202ENST00000519276 CNKSR2Q8WXI2 1034 aa22.72■■□□□ 1.23
UBLCP1-202ENST00000519276 RNF216Q9NWF9 866 aaPredicted RBP22.67■■□□□ 1.22
UBLCP1-202ENST00000519276 C1QBPQ07021 282 aaKnown RBP22.59■■□□□ 1.21
UBLCP1-202ENST00000519276 DNAJC5BQ9UF47 199 aa22.41■■□□□ 1.18
UBLCP1-202ENST00000519276 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
UBLCP1-202ENST00000519276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.9■■□□□ 1.1
UBLCP1-202ENST00000519276 POTEHQ6S545 545 aa21.66■■□□□ 1.06
UBLCP1-202ENST00000519276 NPM3O75607 178 aaKnown RBP21.58■■□□□ 1.05
UBLCP1-202ENST00000519276 U3KPZ7 1027 aaPredicted RBP21.34■■□□□ 1.01
UBLCP1-202ENST00000519276 DSG3P32926 999 aa21.24■□□□□ 0.99
UBLCP1-202ENST00000519276 CAPN15O75808 1086 aa21.22■□□□□ 0.99
UBLCP1-202ENST00000519276 SPINK5Q9NQ38 1064 aaPredicted RBP21.19■□□□□ 0.98
UBLCP1-202ENST00000519276 APLP2Q06481 763 aa20.8■□□□□ 0.92
UBLCP1-202ENST00000519276 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
UBLCP1-202ENST00000519276 ZNF219Q9P2Y4 722 aaPredicted RBP20.72■□□□□ 0.91
UBLCP1-202ENST00000519276 TRHP20396 242 aaPredicted RBP20.72■□□□□ 0.91
UBLCP1-202ENST00000519276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
UBLCP1-202ENST00000519276 ABCB7O75027 752 aa20.63■□□□□ 0.89
UBLCP1-202ENST00000519276 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
UBLCP1-202ENST00000519276 KCNA4P22459 653 aa20.6■□□□□ 0.89
UBLCP1-202ENST00000519276 SAMD1Q6SPF0 538 aaPredicted RBP20.46■□□□□ 0.87
UBLCP1-202ENST00000519276 RBM42Q9BTD8 480 aaKnown RBP20.36■□□□□ 0.85
UBLCP1-202ENST00000519276 CHRDL2Q6WN34 429 aa20.12■□□□□ 0.81
UBLCP1-202ENST00000519276 POLA2Q14181 598 aa20.04■□□□□ 0.8
UBLCP1-202ENST00000519276 MYCNP04198 464 aaPredicted RBP20.02■□□□□ 0.8
UBLCP1-202ENST00000519276 SP7Q8TDD2 431 aaPredicted RBP19.88■□□□□ 0.77
UBLCP1-202ENST00000519276 AKT1S1Q96B36 256 aa19.74■□□□□ 0.75
UBLCP1-202ENST00000519276 ZBTB12Q9Y330 459 aaPredicted RBP19.67■□□□□ 0.74
UBLCP1-202ENST00000519276 REM2Q8IYK8 340 aaPredicted RBP19.52■□□□□ 0.71
UBLCP1-202ENST00000519276 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.71
UBLCP1-202ENST00000519276 FOXD4L1Q9NU39 408 aa19.48■□□□□ 0.71
UBLCP1-202ENST00000519276 PIP4P2Q8N4L2 257 aa19.47■□□□□ 0.71
UBLCP1-202ENST00000519276 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
UBLCP1-202ENST00000519276 SLC4A1APQ9BWU0 796 aaKnown RBP19.36■□□□□ 0.69
UBLCP1-202ENST00000519276 HAX1O00165 279 aa19.33■□□□□ 0.69
UBLCP1-202ENST00000519276 PITPNM1O00562 1244 aa19.29■□□□□ 0.68
UBLCP1-202ENST00000519276 FXR2P51116 673 aaKnown RBP eCLIP19.28■□□□□ 0.68
UBLCP1-202ENST00000519276 ATXN8OSP0DMR3 200 aa18.99■□□□□ 0.63
UBLCP1-202ENST00000519276 SPDYE2BA6NHP3 402 aa18.98■□□□□ 0.63
UBLCP1-202ENST00000519276 SPDYE6P0CI01 402 aa18.98■□□□□ 0.63
UBLCP1-202ENST00000519276 SPDYE2Q495Y8 402 aa18.98■□□□□ 0.63
UBLCP1-202ENST00000519276 EVX2Q03828 476 aa18.94■□□□□ 0.62
UBLCP1-202ENST00000519276 ZBTB22O15209 634 aa18.9■□□□□ 0.62
UBLCP1-202ENST00000519276 FBLN2P98095 1184 aa18.9■□□□□ 0.62
UBLCP1-202ENST00000519276 PRKAR2AP13861 404 aaKnown RBP18.81■□□□□ 0.6
UBLCP1-202ENST00000519276 SPDYE1Q8NFV5 336 aaPredicted RBP18.8■□□□□ 0.6
UBLCP1-202ENST00000519276 CLEC11AQ9Y240 323 aa18.74■□□□□ 0.59
UBLCP1-202ENST00000519276 C19orf67A6NJJ6 358 aa18.68■□□□□ 0.58
UBLCP1-202ENST00000519276 SSUH2Q9Y2M2 353 aa18.64■□□□□ 0.58
UBLCP1-202ENST00000519276 LHX8Q68G74 356 aa18.63■□□□□ 0.57
UBLCP1-202ENST00000519276 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
UBLCP1-202ENST00000519276 MKRN4PQ13434 485 aaPredicted RBP18.61■□□□□ 0.57
UBLCP1-202ENST00000519276 GABBR2O75899 941 aa18.54■□□□□ 0.56
UBLCP1-202ENST00000519276 CHADLQ6NUI6 762 aa18.41■□□□□ 0.54
UBLCP1-202ENST00000519276 PRR29P0C7W0 189 aa18.38■□□□□ 0.53
UBLCP1-202ENST00000519276 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
UBLCP1-202ENST00000519276 PLSCR2Q9NRY7 297 aa18.18■□□□□ 0.5
UBLCP1-202ENST00000519276 CD44P16070 742 aaKnown RBP18.17■□□□□ 0.5
UBLCP1-202ENST00000519276 CLCN6P51797 869 aa18.17■□□□□ 0.5
UBLCP1-202ENST00000519276 FARP1Q9Y4F1 1045 aaPredicted RBP18.13■□□□□ 0.49
UBLCP1-202ENST00000519276 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
UBLCP1-202ENST00000519276 DCBLD2Q96PD2 775 aa17.93■□□□□ 0.46
UBLCP1-202ENST00000519276 ZNF579Q8NAF0 562 aaKnown RBP17.89■□□□□ 0.45
UBLCP1-202ENST00000519276 ZRANB1Q9UGI0 708 aa17.83■□□□□ 0.44
UBLCP1-202ENST00000519276 STAG3Q9UJ98 1225 aa17.77■□□□□ 0.44
UBLCP1-202ENST00000519276 CREBZFQ9NS37 354 aa17.75■□□□□ 0.43
UBLCP1-202ENST00000519276 GALR2O43603 387 aaPredicted RBP17.66■□□□□ 0.42
UBLCP1-202ENST00000519276 OTUD5Q96G74 571 aa17.62■□□□□ 0.41
UBLCP1-202ENST00000519276 PAK3O75914 559 aaPredicted RBP17.6■□□□□ 0.41
UBLCP1-202ENST00000519276 POTEMA6NI47 508 aa17.58■□□□□ 0.41
UBLCP1-202ENST00000519276 CSRNP3Q8WYN3 585 aa17.52■□□□□ 0.39
UBLCP1-202ENST00000519276 POTEB2H3BUK9 544 aa17.49■□□□□ 0.39
UBLCP1-202ENST00000519276 POTEGQ6S5H5 508 aa17.49■□□□□ 0.39
UBLCP1-202ENST00000519276 PHF12Q96QT6 1004 aa17.49■□□□□ 0.39
UBLCP1-202ENST00000519276 NPM1P06748 294 aaKnown RBP eCLIP17.48■□□□□ 0.39
UBLCP1-202ENST00000519276 PCDH10Q9P2E7 1040 aa17.47■□□□□ 0.39
UBLCP1-202ENST00000519276 SPDYE4A6NLX3 237 aa17.46■□□□□ 0.39
UBLCP1-202ENST00000519276 MNX1P50219 401 aaPredicted RBP17.37■□□□□ 0.37
UBLCP1-202ENST00000519276 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
UBLCP1-202ENST00000519276 ASTLQ6HA08 431 aaPredicted RBP17.3■□□□□ 0.36
UBLCP1-202ENST00000519276 SLC39A7Q92504 469 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms