RNA–Protein interactions for RNA: ENST00000519212.1

SNX16-206, Transcript of sorting nexin 16, humanhuman

TSL 3

Gene SNX16, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16-206ENST00000519212 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
SNX16-206ENST00000519212 CHIC1Q5VXU3 224 aa27.95■■■□□ 2.06
SNX16-206ENST00000519212 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
SNX16-206ENST00000519212 SENP3Q9H4L4 574 aaPredicted RBP24.15■■□□□ 1.46
SNX16-206ENST00000519212 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
SNX16-206ENST00000519212 FOXD1Q16676 465 aa22.49■■□□□ 1.19
SNX16-206ENST00000519212 PPP6R1Q9UPN7 881 aa21.76■■□□□ 1.07
SNX16-206ENST00000519212 ADRA2BP18089 450 aa21.74■■□□□ 1.07
SNX16-206ENST00000519212 PIAS4Q8N2W9 510 aaPredicted RBP21.21■□□□□ 0.99
SNX16-206ENST00000519212 MSH5O43196 834 aa20.61■□□□□ 0.89
SNX16-206ENST00000519212 PPP4R3CPQ6ZMV5 832 aa20.06■□□□□ 0.8
SNX16-206ENST00000519212 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
SNX16-206ENST00000519212 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
SNX16-206ENST00000519212 KCNA4P22459 653 aa19.72■□□□□ 0.75
SNX16-206ENST00000519212 NCBP3Q53F19 620 aaKnown RBP19.48■□□□□ 0.71
SNX16-206ENST00000519212 CNKSR2Q8WXI2 1034 aa19.44■□□□□ 0.7
SNX16-206ENST00000519212 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
SNX16-206ENST00000519212 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
SNX16-206ENST00000519212 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
SNX16-206ENST00000519212 HOXD11P31277 338 aaPredicted RBP18.94■□□□□ 0.62
SNX16-206ENST00000519212 SLC4A1APQ9BWU0 796 aaKnown RBP18.76■□□□□ 0.59
SNX16-206ENST00000519212 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
SNX16-206ENST00000519212 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
SNX16-206ENST00000519212 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
SNX16-206ENST00000519212 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
SNX16-206ENST00000519212 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
SNX16-206ENST00000519212 ZBTB22O15209 634 aa18.17■□□□□ 0.5
SNX16-206ENST00000519212 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
SNX16-206ENST00000519212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.48
SNX16-206ENST00000519212 FOXD4L1Q9NU39 408 aa18.06■□□□□ 0.48
SNX16-206ENST00000519212 U3KPZ7 1027 aaPredicted RBP17.82■□□□□ 0.44
SNX16-206ENST00000519212 MYCNP04198 464 aaPredicted RBP17.75■□□□□ 0.43
SNX16-206ENST00000519212 RNF39Q9H2S5 420 aa17.72■□□□□ 0.43
SNX16-206ENST00000519212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.49■□□□□ 0.39
SNX16-206ENST00000519212 HNRNPUL2Q1KMD3 747 aaKnown RBP17.49■□□□□ 0.39
SNX16-206ENST00000519212 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
SNX16-206ENST00000519212 SAMD1Q6SPF0 538 aaPredicted RBP17.46■□□□□ 0.39
SNX16-206ENST00000519212 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
SNX16-206ENST00000519212 ATXN8OSP0DMR3 200 aa17.36■□□□□ 0.37
SNX16-206ENST00000519212 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
SNX16-206ENST00000519212 APLP2Q06481 763 aa17.27■□□□□ 0.36
SNX16-206ENST00000519212 CAPN15O75808 1086 aa17.24■□□□□ 0.35
SNX16-206ENST00000519212 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
SNX16-206ENST00000519212 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
SNX16-206ENST00000519212 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
SNX16-206ENST00000519212 ABCB7O75027 752 aa16.95■□□□□ 0.3
SNX16-206ENST00000519212 DSG3P32926 999 aa16.91■□□□□ 0.3
SNX16-206ENST00000519212 POLA2Q14181 598 aa16.91■□□□□ 0.3
SNX16-206ENST00000519212 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
SNX16-206ENST00000519212 FBLN2P98095 1184 aa16.53■□□□□ 0.24
SNX16-206ENST00000519212 ZBTB12Q9Y330 459 aaPredicted RBP16.5■□□□□ 0.23
SNX16-206ENST00000519212 FKBP8Q14318 412 aa16.36■□□□□ 0.21
SNX16-206ENST00000519212 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
SNX16-206ENST00000519212 SPDYE4A6NLX3 237 aa16.23■□□□□ 0.19
SNX16-206ENST00000519212 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
SNX16-206ENST00000519212 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
SNX16-206ENST00000519212 SPDYE2Q495Y8 402 aa16.12■□□□□ 0.17
SNX16-206ENST00000519212 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
SNX16-206ENST00000519212 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.16
SNX16-206ENST00000519212 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
SNX16-206ENST00000519212 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
SNX16-206ENST00000519212 PROM2Q8N271 834 aa15.93■□□□□ 0.14
SNX16-206ENST00000519212 AKT1S1Q96B36 256 aa15.88■□□□□ 0.13
SNX16-206ENST00000519212 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
SNX16-206ENST00000519212 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
SNX16-206ENST00000519212 CLEC11AQ9Y240 323 aa15.64■□□□□ 0.09
SNX16-206ENST00000519212 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
SNX16-206ENST00000519212 PITPNM1O00562 1244 aa15.61■□□□□ 0.09
SNX16-206ENST00000519212 STAG3Q9UJ98 1225 aa15.58■□□□□ 0.08
SNX16-206ENST00000519212 VASPP50552 380 aaPredicted RBP15.5■□□□□ 0.07
SNX16-206ENST00000519212 PRR29P0C7W0 189 aa15.47■□□□□ 0.07
SNX16-206ENST00000519212 MIER1Q8N108 512 aa15.4■□□□□ 0.06
SNX16-206ENST00000519212 CHRDL2Q6WN34 429 aa15.39■□□□□ 0.05
SNX16-206ENST00000519212 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
SNX16-206ENST00000519212 IFNLR1Q8IU57 520 aaPredicted RBP15.34■□□□□ 0.05
SNX16-206ENST00000519212 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
SNX16-206ENST00000519212 CHADLQ6NUI6 762 aa15.29■□□□□ 0.04
SNX16-206ENST00000519212 FXR2P51116 673 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNX16-206ENST00000519212 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
SNX16-206ENST00000519212 PIP4P2Q8N4L2 257 aa15.24■□□□□ 0.03
SNX16-206ENST00000519212 PLEKHG5O94827 1062 aa15.22■□□□□ 0.03
SNX16-206ENST00000519212 PRKAR2AP13861 404 aaKnown RBP15.21■□□□□ 0.03
SNX16-206ENST00000519212 MNX1P50219 401 aaPredicted RBP15.16■□□□□ 0.02
SNX16-206ENST00000519212 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
SNX16-206ENST00000519212 SPOCK2Q92563 424 aa15.08■□□□□ 0
SNX16-206ENST00000519212 FARP1Q9Y4F1 1045 aaPredicted RBP15.08■□□□□ 0
SNX16-206ENST00000519212 RTN4Q9NQC3 1192 aaKnown RBP15.02■□□□□ -0
SNX16-206ENST00000519212 NPM1P06748 294 aaKnown RBP eCLIP14.99□□□□□ -0.01
SNX16-206ENST00000519212 NUBP1P53384 320 aa14.99□□□□□ -0.01
SNX16-206ENST00000519212 AMER1Q5JTC6 1135 aaPredicted RBP14.97□□□□□ -0.01
SNX16-206ENST00000519212 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
SNX16-206ENST00000519212 CIZ1Q9ULV3 898 aaPredicted RBP14.89□□□□□ -0.03
SNX16-206ENST00000519212 DCAF8Q5TAQ9 597 aa14.87□□□□□ -0.03
SNX16-206ENST00000519212 PKD2Q13563 968 aa14.85□□□□□ -0.03
SNX16-206ENST00000519212 TSPYL2Q9H2G4 693 aaPredicted RBP14.85□□□□□ -0.03
SNX16-206ENST00000519212 POTEHQ6S545 545 aa14.83□□□□□ -0.04
SNX16-206ENST00000519212 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
SNX16-206ENST00000519212 GSE1Q14687 1217 aa14.78□□□□□ -0.04
SNX16-206ENST00000519212 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
SNX16-206ENST00000519212 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms