RNA–Protein interactions for RNA: ENST00000519202.1

SCUBE2-204, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-204ENST00000519202 AEBP2Q6ZN18 517 aaPredicted RBP15.14■□□□□ 0.01
SCUBE2-204ENST00000519202 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
SCUBE2-204ENST00000519202 SENP3Q9H4L4 574 aaPredicted RBP12.78□□□□□ -0.36
SCUBE2-204ENST00000519202 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
SCUBE2-204ENST00000519202 FOXD1Q16676 465 aa11.99□□□□□ -0.49
SCUBE2-204ENST00000519202 PLPPR3Q6T4P5 718 aa11.38□□□□□ -0.59
SCUBE2-204ENST00000519202 POTEDQ86YR6 584 aa11.38□□□□□ -0.59
SCUBE2-204ENST00000519202 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
SCUBE2-204ENST00000519202 ADRA2BP18089 450 aa11.18□□□□□ -0.62
SCUBE2-204ENST00000519202 PIAS4Q8N2W9 510 aaPredicted RBP11.14□□□□□ -0.63
SCUBE2-204ENST00000519202 MSH5O43196 834 aa11.11□□□□□ -0.63
SCUBE2-204ENST00000519202 NISCHQ9Y2I1 1504 aa10.61□□□□□ -0.71
SCUBE2-204ENST00000519202 MAPK8IP2Q13387 824 aaPredicted RBP10.29□□□□□ -0.76
SCUBE2-204ENST00000519202 DMRT2Q9Y5R5 561 aa10.18□□□□□ -0.78
SCUBE2-204ENST00000519202 SCAF1Q9H7N4 1312 aaKnown RBP10.08□□□□□ -0.8
SCUBE2-204ENST00000519202 PPP4R3CPQ6ZMV5 832 aa10.01□□□□□ -0.81
SCUBE2-204ENST00000519202 HOXD11P31277 338 aaPredicted RBP9.83□□□□□ -0.84
SCUBE2-204ENST00000519202 CNKSR2Q8WXI2 1034 aa9.79□□□□□ -0.84
SCUBE2-204ENST00000519202 RNF216Q9NWF9 866 aaPredicted RBP9.71□□□□□ -0.86
SCUBE2-204ENST00000519202 DCAF8L1A6NGE4 600 aa9.65□□□□□ -0.86
SCUBE2-204ENST00000519202 RNF39Q9H2S5 420 aa9.57□□□□□ -0.88
SCUBE2-204ENST00000519202 NCBP3Q53F19 620 aaKnown RBP9.54□□□□□ -0.88
SCUBE2-204ENST00000519202 NPM3O75607 178 aaKnown RBP9.53□□□□□ -0.88
SCUBE2-204ENST00000519202 CACNB1Q02641 598 aaPredicted RBP9.51□□□□□ -0.89
SCUBE2-204ENST00000519202 DNAJC5BQ9UF47 199 aa9.45□□□□□ -0.9
SCUBE2-204ENST00000519202 KCNA4P22459 653 aa9.37□□□□□ -0.91
SCUBE2-204ENST00000519202 C1QBPQ07021 282 aaKnown RBP9.36□□□□□ -0.91
SCUBE2-204ENST00000519202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.27□□□□□ -0.93
SCUBE2-204ENST00000519202 U3KPZ7 1027 aaPredicted RBP9.18□□□□□ -0.94
SCUBE2-204ENST00000519202 SLC4A2P04920 1241 aa9.14□□□□□ -0.95
SCUBE2-204ENST00000519202 CCDC180Q9P1Z9 1646 aa9.11□□□□□ -0.95
SCUBE2-204ENST00000519202 SPINK5Q9NQ38 1064 aaPredicted RBP9.04□□□□□ -0.96
SCUBE2-204ENST00000519202 ZCCHC6Q5VYS8 1495 aaKnown RBP8.98□□□□□ -0.97
SCUBE2-204ENST00000519202 DSG3P32926 999 aa8.95□□□□□ -0.98
SCUBE2-204ENST00000519202 CAPN15O75808 1086 aa8.93□□□□□ -0.98
SCUBE2-204ENST00000519202 DCAF1Q9Y4B6 1507 aa8.85□□□□□ -0.99
SCUBE2-204ENST00000519202 POTEHQ6S545 545 aa8.82□□□□□ -1
SCUBE2-204ENST00000519202 TRHP20396 242 aaPredicted RBP8.8□□□□□ -1
SCUBE2-204ENST00000519202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.78□□□□□ -1
SCUBE2-204ENST00000519202 HNRNPUL2Q1KMD3 747 aaKnown RBP8.78□□□□□ -1
SCUBE2-204ENST00000519202 SLC4A1APQ9BWU0 796 aaKnown RBP8.78□□□□□ -1
SCUBE2-204ENST00000519202 ABCB7O75027 752 aa8.77□□□□□ -1.01
SCUBE2-204ENST00000519202 SAMD1Q6SPF0 538 aaPredicted RBP8.77□□□□□ -1.01
SCUBE2-204ENST00000519202 ZNF219Q9P2Y4 722 aaPredicted RBP8.77□□□□□ -1.01
SCUBE2-204ENST00000519202 SHROOM4Q9ULL8 1493 aa8.77□□□□□ -1.01
SCUBE2-204ENST00000519202 MYCNP04198 464 aaPredicted RBP8.74□□□□□ -1.01
SCUBE2-204ENST00000519202 APLP2Q06481 763 aa8.74□□□□□ -1.01
SCUBE2-204ENST00000519202 ZBTB22O15209 634 aa8.69□□□□□ -1.02
SCUBE2-204ENST00000519202 FOXD4L1Q9NU39 408 aa8.69□□□□□ -1.02
SCUBE2-204ENST00000519202 SUPT5HO00267 1087 aaKnown RBP8.65□□□□□ -1.02
SCUBE2-204ENST00000519202 ATF5Q9Y2D1 282 aaPredicted RBP8.65□□□□□ -1.02
SCUBE2-204ENST00000519202 MYO15BQ96JP2 1530 aa8.64□□□□□ -1.03
SCUBE2-204ENST00000519202 POLA2Q14181 598 aa8.59□□□□□ -1.03
SCUBE2-204ENST00000519202 DCAF8L2P0C7V8 631 aa8.56□□□□□ -1.04
SCUBE2-204ENST00000519202 ABCC9O60706 1549 aa8.46□□□□□ -1.05
SCUBE2-204ENST00000519202 RBM42Q9BTD8 480 aaKnown RBP8.44□□□□□ -1.06
SCUBE2-204ENST00000519202 NACADO15069 1562 aa8.42□□□□□ -1.06
SCUBE2-204ENST00000519202 ATXN8OSP0DMR3 200 aa8.39□□□□□ -1.07
SCUBE2-204ENST00000519202 OSCARQ8IYS5 282 aa8.35□□□□□ -1.07
SCUBE2-204ENST00000519202 ZBTB12Q9Y330 459 aaPredicted RBP8.35□□□□□ -1.07
SCUBE2-204ENST00000519202 RSF1Q96T23 1441 aaPredicted RBP8.35□□□□□ -1.07
SCUBE2-204ENST00000519202 RB1CC1Q8TDY2 1594 aa8.32□□□□□ -1.08
SCUBE2-204ENST00000519202 CHRDL2Q6WN34 429 aa8.32□□□□□ -1.08
SCUBE2-204ENST00000519202 SCRIBQ14160 1630 aa8.32□□□□□ -1.08
SCUBE2-204ENST00000519202 AKT1S1Q96B36 256 aa8.29□□□□□ -1.08
SCUBE2-204ENST00000519202 HRCP23327 699 aa8.27□□□□□ -1.09
SCUBE2-204ENST00000519202 MKRN4PQ13434 485 aaPredicted RBP8.26□□□□□ -1.09
SCUBE2-204ENST00000519202 REM2Q8IYK8 340 aaPredicted RBP8.25□□□□□ -1.09
SCUBE2-204ENST00000519202 CSRNP3Q8WYN3 585 aa8.24□□□□□ -1.09
SCUBE2-204ENST00000519202 BAZ1AQ9NRL2 1556 aaPredicted RBP8.18□□□□□ -1.1
SCUBE2-204ENST00000519202 PITPNM1O00562 1244 aa8.18□□□□□ -1.1
SCUBE2-204ENST00000519202 TRIM41Q8WV44 630 aa8.18□□□□□ -1.1
SCUBE2-204ENST00000519202 TRIM26Q12899 539 aaPredicted RBP8.17□□□□□ -1.1
SCUBE2-204ENST00000519202 PCGF6Q9BYE7 350 aa8.16□□□□□ -1.1
SCUBE2-204ENST00000519202 MROH2BQ7Z745 1585 aa8.15□□□□□ -1.1
SCUBE2-204ENST00000519202 FBLN2P98095 1184 aa8.15□□□□□ -1.1
SCUBE2-204ENST00000519202 PIP4P2Q8N4L2 257 aa8.15□□□□□ -1.1
SCUBE2-204ENST00000519202 CECR2Q9BXF3 1484 aa8.14□□□□□ -1.11
SCUBE2-204ENST00000519202 SPDYE2BA6NHP3 402 aa8.14□□□□□ -1.11
SCUBE2-204ENST00000519202 SPDYE6P0CI01 402 aa8.14□□□□□ -1.11
SCUBE2-204ENST00000519202 SPDYE2Q495Y8 402 aa8.14□□□□□ -1.11
SCUBE2-204ENST00000519202 LOC105371045A0A1W2PR82 267 aa8.13□□□□□ -1.11
SCUBE2-204ENST00000519202 ZEB1P37275 1124 aaPredicted RBP8.11□□□□□ -1.11
SCUBE2-204ENST00000519202 SSUH2Q9Y2M2 353 aa8.11□□□□□ -1.11
SCUBE2-204ENST00000519202 FXR2P51116 673 aaKnown RBP eCLIP8.1□□□□□ -1.11
SCUBE2-204ENST00000519202 EHMT2Q96KQ7 1210 aa8.08□□□□□ -1.12
SCUBE2-204ENST00000519202 TOP2AP11388 1531 aaKnown RBP8.08□□□□□ -1.12
SCUBE2-204ENST00000519202 WIZO95785 1651 aa8.08□□□□□ -1.12
SCUBE2-204ENST00000519202 SMARCA4P51532 1647 aa8.06□□□□□ -1.12
SCUBE2-204ENST00000519202 EIF4G1Q04637 1599 aaKnown RBP8.05□□□□□ -1.12
SCUBE2-204ENST00000519202 ZNF692Q9BU19 519 aaPredicted RBP8.03□□□□□ -1.12
SCUBE2-204ENST00000519202 EEA1Q15075 1411 aa8.03□□□□□ -1.12
SCUBE2-204ENST00000519202 PEG3Q9GZU2 1588 aa8□□□□□ -1.13
SCUBE2-204ENST00000519202 SP7Q8TDD2 431 aaPredicted RBP7.99□□□□□ -1.13
SCUBE2-204ENST00000519202 SMARCA2P51531 1590 aa7.98□□□□□ -1.13
SCUBE2-204ENST00000519202 SPDYE1Q8NFV5 336 aaPredicted RBP7.98□□□□□ -1.13
SCUBE2-204ENST00000519202 CCDC88BA6NC98 1476 aa7.98□□□□□ -1.13
SCUBE2-204ENST00000519202 UNC13AQ9UPW8 1703 aa7.97□□□□□ -1.13
SCUBE2-204ENST00000519202 EVX2Q03828 476 aa7.96□□□□□ -1.14
SCUBE2-204ENST00000519202 WRNQ14191 1432 aaPredicted RBP eCLIP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms