RNA–Protein interactions for RNA: ENST00000519143.5

MRPS27-208, Transcript of mitochondrial ribosomal protein S27, human

TSL 5

Gene MRPS27, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS27-208	ENST00000519143	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.09	□□□□□ -0.31
MRPS27-208	ENST00000519143	CHIC1	Q5VXU3	224 aa		12.37	□□□□□ -0.43
MRPS27-208	ENST00000519143	SENP3	Q9H4L4	574 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPS27-208	ENST00000519143	PHF23	Q9BUL5	403 aa	Predicted RBP	11.03	□□□□□ -0.64
MRPS27-208	ENST00000519143	FOXD1	Q16676	465 aa		10.43	□□□□□ -0.74
MRPS27-208	ENST00000519143	PLPPR3	Q6T4P5	718 aa		9.84	□□□□□ -0.83
MRPS27-208	ENST00000519143	MSH5	O43196	834 aa		9.83	□□□□□ -0.84
MRPS27-208	ENST00000519143	POTED	Q86YR6	584 aa		9.71	□□□□□ -0.86
MRPS27-208	ENST00000519143	PIAS4	Q8N2W9	510 aa	Predicted RBP	9.7	□□□□□ -0.86
MRPS27-208	ENST00000519143	PPP6R1	Q9UPN7	881 aa		9.68	□□□□□ -0.86
MRPS27-208	ENST00000519143	ADRA2B	P18089	450 aa		9.62	□□□□□ -0.87
MRPS27-208	ENST00000519143	DMRT2	Q9Y5R5	561 aa		8.88	□□□□□ -0.99
MRPS27-208	ENST00000519143	MAPK8IP2	Q13387	824 aa	Predicted RBP	8.86	□□□□□ -0.99
MRPS27-208	ENST00000519143	SCAF1	Q9H7N4	1312 aa	Known RBP	8.84	□□□□□ -0.99
MRPS27-208	ENST00000519143	PPP4R3CP	Q6ZMV5	832 aa		8.6	□□□□□ -1.03
MRPS27-208	ENST00000519143	HOXD11	P31277	338 aa	Predicted RBP	8.54	□□□□□ -1.04
MRPS27-208	ENST00000519143	CNKSR2	Q8WXI2	1034 aa		8.48	□□□□□ -1.05
MRPS27-208	ENST00000519143	RNF216	Q9NWF9	866 aa	Predicted RBP	8.44	□□□□□ -1.06
MRPS27-208	ENST00000519143	CACNB1	Q02641	598 aa	Predicted RBP	8.43	□□□□□ -1.06
MRPS27-208	ENST00000519143	DCAF8L1	A6NGE4	600 aa		8.41	□□□□□ -1.06
MRPS27-208	ENST00000519143	RNF39	Q9H2S5	420 aa		8.37	□□□□□ -1.07
MRPS27-208	ENST00000519143	DNAJC5B	Q9UF47	199 aa		8.32	□□□□□ -1.08
MRPS27-208	ENST00000519143	C1QBP	Q07021	282 aa	Known RBP	8.26	□□□□□ -1.09
MRPS27-208	ENST00000519143	NCBP3	Q53F19	620 aa	Known RBP	8.25	□□□□□ -1.09
MRPS27-208	ENST00000519143	NPM3	O75607	178 aa	Known RBP	8.13	□□□□□ -1.11
MRPS27-208	ENST00000519143	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	8.06	□□□□□ -1.12
MRPS27-208	ENST00000519143		U3KPZ7	1027 aa	Predicted RBP	7.91	□□□□□ -1.14
MRPS27-208	ENST00000519143	KCNA4	P22459	653 aa		7.87	□□□□□ -1.15
MRPS27-208	ENST00000519143	DSG3	P32926	999 aa		7.8	□□□□□ -1.16
MRPS27-208	ENST00000519143	SPINK5	Q9NQ38	1064 aa	Predicted RBP	7.8	□□□□□ -1.16
MRPS27-208	ENST00000519143	SLC4A2	P04920	1241 aa		7.79	□□□□□ -1.16
MRPS27-208	ENST00000519143	CAPN15	O75808	1086 aa		7.77	□□□□□ -1.17
MRPS27-208	ENST00000519143	APLP2	Q06481	763 aa		7.71	□□□□□ -1.18
MRPS27-208	ENST00000519143	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	7.68	□□□□□ -1.18
MRPS27-208	ENST00000519143	HNRNPUL2	Q1KMD3	747 aa	Known RBP	7.68	□□□□□ -1.18
MRPS27-208	ENST00000519143	ZNF219	Q9P2Y4	722 aa	Predicted RBP	7.66	□□□□□ -1.18
MRPS27-208	ENST00000519143	TRH	P20396	242 aa	Predicted RBP	7.62	□□□□□ -1.19
MRPS27-208	ENST00000519143	SAMD1	Q6SPF0	538 aa	Predicted RBP	7.62	□□□□□ -1.19
MRPS27-208	ENST00000519143	POTEH	Q6S545	545 aa		7.59	□□□□□ -1.19
MRPS27-208	ENST00000519143	ABCB7	O75027	752 aa		7.57	□□□□□ -1.2
MRPS27-208	ENST00000519143	MYCN	P04198	464 aa	Predicted RBP	7.53	□□□□□ -1.2
MRPS27-208	ENST00000519143	RBM42	Q9BTD8	480 aa	Known RBP	7.46	□□□□□ -1.22
MRPS27-208	ENST00000519143	POLA2	Q14181	598 aa		7.43	□□□□□ -1.22
MRPS27-208	ENST00000519143	SLC4A1AP	Q9BWU0	796 aa	Known RBP	7.41	□□□□□ -1.22
MRPS27-208	ENST00000519143	FOXD4L1	Q9NU39	408 aa		7.4	□□□□□ -1.22
MRPS27-208	ENST00000519143	ATF5	Q9Y2D1	282 aa	Predicted RBP	7.33	□□□□□ -1.24
MRPS27-208	ENST00000519143	ZBTB12	Q9Y330	459 aa	Predicted RBP	7.31	□□□□□ -1.24
MRPS27-208	ENST00000519143	CHRDL2	Q6WN34	429 aa		7.3	□□□□□ -1.24
MRPS27-208	ENST00000519143	AKT1S1	Q96B36	256 aa		7.27	□□□□□ -1.25
MRPS27-208	ENST00000519143	ZBTB22	O15209	634 aa		7.23	□□□□□ -1.25
MRPS27-208	ENST00000519143	ATXN8OS	P0DMR3	200 aa		7.22	□□□□□ -1.25
MRPS27-208	ENST00000519143	REM2	Q8IYK8	340 aa	Predicted RBP	7.18	□□□□□ -1.26
MRPS27-208	ENST00000519143	OSCAR	Q8IYS5	282 aa		7.18	□□□□□ -1.26
MRPS27-208	ENST00000519143	PIP4P2	Q8N4L2	257 aa		7.11	□□□□□ -1.27
MRPS27-208	ENST00000519143	PITPNM1	O00562	1244 aa		7.09	□□□□□ -1.27
MRPS27-208	ENST00000519143	FXR2	P51116	673 aa	Known RBP eCLIP	7.09	□□□□□ -1.27
MRPS27-208	ENST00000519143	SP7	Q8TDD2	431 aa	Predicted RBP	7.08	□□□□□ -1.28
MRPS27-208	ENST00000519143	SPDYE2B	A6NHP3	402 aa		7.07	□□□□□ -1.28
MRPS27-208	ENST00000519143	SPDYE6	P0CI01	402 aa		7.07	□□□□□ -1.28
MRPS27-208	ENST00000519143	SPDYE2	Q495Y8	402 aa		7.07	□□□□□ -1.28
MRPS27-208	ENST00000519143	FBLN2	P98095	1184 aa		7.06	□□□□□ -1.28
MRPS27-208	ENST00000519143	MKRN4P	Q13434	485 aa	Predicted RBP	7.01	□□□□□ -1.29
MRPS27-208	ENST00000519143	SSUH2	Q9Y2M2	353 aa		6.98	□□□□□ -1.29
MRPS27-208	ENST00000519143	HAX1	O00165	279 aa		6.97	□□□□□ -1.29
MRPS27-208	ENST00000519143	SPDYE1	Q8NFV5	336 aa	Predicted RBP	6.96	□□□□□ -1.3
MRPS27-208	ENST00000519143	ZNF692	Q9BU19	519 aa	Predicted RBP	6.94	□□□□□ -1.3
MRPS27-208	ENST00000519143	PRKAR2A	P13861	404 aa	Known RBP	6.9	□□□□□ -1.3
MRPS27-208	ENST00000519143	EVX2	Q03828	476 aa		6.9	□□□□□ -1.3
MRPS27-208	ENST00000519143	CLEC11A	Q9Y240	323 aa		6.89	□□□□□ -1.31
MRPS27-208	ENST00000519143	C19orf67	A6NJJ6	358 aa		6.86	□□□□□ -1.31
MRPS27-208	ENST00000519143	CSRNP3	Q8WYN3	585 aa		6.84	□□□□□ -1.31
MRPS27-208	ENST00000519143	PABPN1	Q86U42	306 aa	Known RBP eCLIP	6.83	□□□□□ -1.32
MRPS27-208	ENST00000519143	PRR29	P0C7W0	189 aa		6.8	□□□□□ -1.32
MRPS27-208	ENST00000519143	CHADL	Q6NUI6	762 aa		6.77	□□□□□ -1.33
MRPS27-208	ENST00000519143	GABBR2	O75899	941 aa		6.75	□□□□□ -1.33
MRPS27-208	ENST00000519143	FARP1	Q9Y4F1	1045 aa	Predicted RBP	6.71	□□□□□ -1.34
MRPS27-208	ENST00000519143	CLCN6	P51797	869 aa		6.69	□□□□□ -1.34
MRPS27-208	ENST00000519143	CD44	P16070	742 aa	Known RBP	6.67	□□□□□ -1.34
MRPS27-208	ENST00000519143	STAG3	Q9UJ98	1225 aa		6.67	□□□□□ -1.34
MRPS27-208	ENST00000519143	LHX8	Q68G74	356 aa		6.63	□□□□□ -1.35
MRPS27-208	ENST00000519143	CREBZF	Q9NS37	354 aa		6.63	□□□□□ -1.35
MRPS27-208	ENST00000519143	SPDYE4	A6NLX3	237 aa		6.62	□□□□□ -1.35
MRPS27-208	ENST00000519143	POTEI	P0CG38	1075 aa		6.62	□□□□□ -1.35
MRPS27-208	ENST00000519143	EHMT2	Q96KQ7	1210 aa		6.62	□□□□□ -1.35
MRPS27-208	ENST00000519143	ZNF579	Q8NAF0	562 aa	Known RBP	6.6	□□□□□ -1.35
MRPS27-208	ENST00000519143	ZRANB1	Q9UGI0	708 aa		6.56	□□□□□ -1.36
MRPS27-208	ENST00000519143	MNX1	P50219	401 aa	Predicted RBP	6.53	□□□□□ -1.36
MRPS27-208	ENST00000519143	DCBLD2	Q96PD2	775 aa		6.53	□□□□□ -1.36
MRPS27-208	ENST00000519143	PROM2	Q8N271	834 aa		6.51	□□□□□ -1.37
MRPS27-208	ENST00000519143	GALR2	O43603	387 aa	Predicted RBP	6.5	□□□□□ -1.37
MRPS27-208	ENST00000519143	NPM1	P06748	294 aa	Known RBP eCLIP	6.5	□□□□□ -1.37
MRPS27-208	ENST00000519143	PAK3	O75914	559 aa	Predicted RBP	6.49	□□□□□ -1.37
MRPS27-208	ENST00000519143	PHF12	Q96QT6	1004 aa		6.45	□□□□□ -1.38
MRPS27-208	ENST00000519143	POTEB2	H3BUK9	544 aa		6.39	□□□□□ -1.39
MRPS27-208	ENST00000519143	ASTL	Q6HA08	431 aa	Predicted RBP	6.39	□□□□□ -1.39
MRPS27-208	ENST00000519143	OTUD5	Q96G74	571 aa		6.39	□□□□□ -1.39
MRPS27-208	ENST00000519143	PELP1	Q8IZL8	1130 aa	Known RBP	6.38	□□□□□ -1.39
MRPS27-208	ENST00000519143	MS4A3	Q96HJ5	214 aa		6.38	□□□□□ -1.39
MRPS27-208	ENST00000519143	CCDC61	Q9Y6R9	512 aa		6.37	□□□□□ -1.39
MRPS27-208	ENST00000519143	ATMIN	O43313	823 aa	Predicted RBP	6.36	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms