RNA–Protein interactions for RNA: ENST00000518990.5

CDKL3-202, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2

Gene CDKL3, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-202ENST00000518990 AEBP2Q6ZN18 517 aaPredicted RBP31.95■■■□□ 2.71
CDKL3-202ENST00000518990 CHIC1Q5VXU3 224 aa30.72■■■□□ 2.51
CDKL3-202ENST00000518990 SENP3Q9H4L4 574 aaPredicted RBP27.12■■□□□ 1.93
CDKL3-202ENST00000518990 PHF23Q9BUL5 403 aaPredicted RBP27■■□□□ 1.91
CDKL3-202ENST00000518990 FOXD1Q16676 465 aa25.27■■□□□ 1.64
CDKL3-202ENST00000518990 PLPPR3Q6T4P5 718 aa24.71■■□□□ 1.55
CDKL3-202ENST00000518990 PPP6R1Q9UPN7 881 aa23.97■■□□□ 1.43
CDKL3-202ENST00000518990 ADRA2BP18089 450 aa23.89■■□□□ 1.41
CDKL3-202ENST00000518990 PIAS4Q8N2W9 510 aaPredicted RBP23.68■■□□□ 1.38
CDKL3-202ENST00000518990 MSH5O43196 834 aa23.44■■□□□ 1.34
CDKL3-202ENST00000518990 POTEDQ86YR6 584 aa22.19■■□□□ 1.14
CDKL3-202ENST00000518990 MAPK8IP2Q13387 824 aaPredicted RBP21.83■■□□□ 1.09
CDKL3-202ENST00000518990 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
CDKL3-202ENST00000518990 PPP4R3CPQ6ZMV5 832 aa21.73■■□□□ 1.07
CDKL3-202ENST00000518990 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
CDKL3-202ENST00000518990 CNKSR2Q8WXI2 1034 aa21.21■□□□□ 0.99
CDKL3-202ENST00000518990 HOXD11P31277 338 aaPredicted RBP20.98■□□□□ 0.95
CDKL3-202ENST00000518990 NCBP3Q53F19 620 aaKnown RBP20.97■□□□□ 0.95
CDKL3-202ENST00000518990 RNF216Q9NWF9 866 aaPredicted RBP20.92■□□□□ 0.94
CDKL3-202ENST00000518990 NPM3O75607 178 aaKnown RBP20.73■□□□□ 0.91
CDKL3-202ENST00000518990 KCNA4P22459 653 aa20.72■□□□□ 0.91
CDKL3-202ENST00000518990 DCAF8L1A6NGE4 600 aa20.63■□□□□ 0.89
CDKL3-202ENST00000518990 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
CDKL3-202ENST00000518990 RNF39Q9H2S5 420 aa20.07■□□□□ 0.8
CDKL3-202ENST00000518990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.93■□□□□ 0.78
CDKL3-202ENST00000518990 CACNB1Q02641 598 aaPredicted RBP19.84■□□□□ 0.77
CDKL3-202ENST00000518990 C1QBPQ07021 282 aaKnown RBP19.77■□□□□ 0.76
CDKL3-202ENST00000518990 SLC4A2P04920 1241 aa19.71■□□□□ 0.75
CDKL3-202ENST00000518990 U3KPZ7 1027 aaPredicted RBP19.62■□□□□ 0.73
CDKL3-202ENST00000518990 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
CDKL3-202ENST00000518990 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
CDKL3-202ENST00000518990 FOXD4L1Q9NU39 408 aa19.18■□□□□ 0.66
CDKL3-202ENST00000518990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.65
CDKL3-202ENST00000518990 MYCNP04198 464 aaPredicted RBP19.14■□□□□ 0.65
CDKL3-202ENST00000518990 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
CDKL3-202ENST00000518990 CAPN15O75808 1086 aa19.1■□□□□ 0.65
CDKL3-202ENST00000518990 ZBTB22O15209 634 aa19.09■□□□□ 0.65
CDKL3-202ENST00000518990 SAMD1Q6SPF0 538 aaPredicted RBP19.08■□□□□ 0.64
CDKL3-202ENST00000518990 APLP2Q06481 763 aa19.03■□□□□ 0.64
CDKL3-202ENST00000518990 DSG3P32926 999 aa18.94■□□□□ 0.62
CDKL3-202ENST00000518990 TRHP20396 242 aaPredicted RBP18.91■□□□□ 0.62
CDKL3-202ENST00000518990 ZNF219Q9P2Y4 722 aaPredicted RBP18.89■□□□□ 0.61
CDKL3-202ENST00000518990 ABCB7O75027 752 aa18.73■□□□□ 0.59
CDKL3-202ENST00000518990 ATF5Q9Y2D1 282 aaPredicted RBP18.72■□□□□ 0.59
CDKL3-202ENST00000518990 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
CDKL3-202ENST00000518990 ATXN8OSP0DMR3 200 aa18.54■□□□□ 0.56
CDKL3-202ENST00000518990 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
CDKL3-202ENST00000518990 POLA2Q14181 598 aa18.51■□□□□ 0.55
CDKL3-202ENST00000518990 ZBTB12Q9Y330 459 aaPredicted RBP18.14■□□□□ 0.49
CDKL3-202ENST00000518990 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
CDKL3-202ENST00000518990 OSCARQ8IYS5 282 aa17.92■□□□□ 0.46
CDKL3-202ENST00000518990 MKRN4PQ13434 485 aaPredicted RBP17.88■□□□□ 0.45
CDKL3-202ENST00000518990 FBLN2P98095 1184 aa17.87■□□□□ 0.45
CDKL3-202ENST00000518990 AKT1S1Q96B36 256 aa17.71■□□□□ 0.43
CDKL3-202ENST00000518990 SPDYE2BA6NHP3 402 aa17.64■□□□□ 0.41
CDKL3-202ENST00000518990 SPDYE6P0CI01 402 aa17.64■□□□□ 0.41
CDKL3-202ENST00000518990 SPDYE2Q495Y8 402 aa17.64■□□□□ 0.41
CDKL3-202ENST00000518990 REM2Q8IYK8 340 aaPredicted RBP17.55■□□□□ 0.4
CDKL3-202ENST00000518990 SSUH2Q9Y2M2 353 aa17.49■□□□□ 0.39
CDKL3-202ENST00000518990 ZNF692Q9BU19 519 aaPredicted RBP17.48■□□□□ 0.39
CDKL3-202ENST00000518990 CHRDL2Q6WN34 429 aa17.47■□□□□ 0.39
CDKL3-202ENST00000518990 POTEHQ6S545 545 aa17.46■□□□□ 0.39
CDKL3-202ENST00000518990 PITPNM1O00562 1244 aa17.37■□□□□ 0.37
CDKL3-202ENST00000518990 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
CDKL3-202ENST00000518990 SPDYE1Q8NFV5 336 aaPredicted RBP17.21■□□□□ 0.35
CDKL3-202ENST00000518990 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
CDKL3-202ENST00000518990 PIP4P2Q8N4L2 257 aa17.17■□□□□ 0.34
CDKL3-202ENST00000518990 CLEC11AQ9Y240 323 aa17.16■□□□□ 0.34
CDKL3-202ENST00000518990 FXR2P51116 673 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDKL3-202ENST00000518990 PRR29P0C7W0 189 aa16.93■□□□□ 0.3
CDKL3-202ENST00000518990 PRKAR2AP13861 404 aaKnown RBP16.91■□□□□ 0.3
CDKL3-202ENST00000518990 PROM2Q8N271 834 aa16.91■□□□□ 0.3
CDKL3-202ENST00000518990 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
CDKL3-202ENST00000518990 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
CDKL3-202ENST00000518990 FKBP8Q14318 412 aa16.78■□□□□ 0.28
CDKL3-202ENST00000518990 HAX1O00165 279 aa16.7■□□□□ 0.26
CDKL3-202ENST00000518990 CREBZFQ9NS37 354 aa16.67■□□□□ 0.26
CDKL3-202ENST00000518990 FARP1Q9Y4F1 1045 aaPredicted RBP16.61■□□□□ 0.25
CDKL3-202ENST00000518990 EVX2Q03828 476 aa16.59■□□□□ 0.25
CDKL3-202ENST00000518990 C19orf67A6NJJ6 358 aa16.57■□□□□ 0.24
CDKL3-202ENST00000518990 SP7Q8TDD2 431 aaPredicted RBP16.57■□□□□ 0.24
CDKL3-202ENST00000518990 MNX1P50219 401 aaPredicted RBP16.46■□□□□ 0.23
CDKL3-202ENST00000518990 CD44P16070 742 aaKnown RBP16.39■□□□□ 0.21
CDKL3-202ENST00000518990 MIER1Q8N108 512 aa16.33■□□□□ 0.2
CDKL3-202ENST00000518990 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDKL3-202ENST00000518990 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
CDKL3-202ENST00000518990 PLCD3Q8N3E9 789 aa16.25■□□□□ 0.19
CDKL3-202ENST00000518990 PLEKHG5O94827 1062 aa16.24■□□□□ 0.19
CDKL3-202ENST00000518990 ZRANB1Q9UGI0 708 aa16.22■□□□□ 0.19
CDKL3-202ENST00000518990 GABBR2O75899 941 aa16.21■□□□□ 0.19
CDKL3-202ENST00000518990 ZNF579Q8NAF0 562 aaKnown RBP16.18■□□□□ 0.18
CDKL3-202ENST00000518990 PAK3O75914 559 aaPredicted RBP16.14■□□□□ 0.17
CDKL3-202ENST00000518990 VASPP50552 380 aaPredicted RBP16.11■□□□□ 0.17
CDKL3-202ENST00000518990 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
CDKL3-202ENST00000518990 CLCN6P51797 869 aa16.06■□□□□ 0.16
CDKL3-202ENST00000518990 RASEFQ8IZ41 740 aa16.06■□□□□ 0.16
CDKL3-202ENST00000518990 PHF12Q96QT6 1004 aa16.06■□□□□ 0.16
CDKL3-202ENST00000518990 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
CDKL3-202ENST00000518990 NUBP1P53384 320 aa16.02■□□□□ 0.16
CDKL3-202ENST00000518990 CCDC61Q9Y6R9 512 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms