RNA–Protein interactions for RNA: ENST00000518964.5

LINC00861-203, long intergenic non-protein coding RNA 861, humanhuman

TSL 4

Gene LINC00861, Length 585 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00861-203ENST00000518964 AEBP2Q6ZN18 517 aaPredicted RBP23.88■■□□□ 1.41
LINC00861-203ENST00000518964 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
LINC00861-203ENST00000518964 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
LINC00861-203ENST00000518964 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
LINC00861-203ENST00000518964 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
LINC00861-203ENST00000518964 FOXD1Q16676 465 aa18.78■□□□□ 0.6
LINC00861-203ENST00000518964 ADRA2BP18089 450 aa18.17■□□□□ 0.5
LINC00861-203ENST00000518964 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
LINC00861-203ENST00000518964 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
LINC00861-203ENST00000518964 MSH5O43196 834 aa17.3■□□□□ 0.36
LINC00861-203ENST00000518964 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
LINC00861-203ENST00000518964 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
LINC00861-203ENST00000518964 KCNA4P22459 653 aa16.67■□□□□ 0.26
LINC00861-203ENST00000518964 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
LINC00861-203ENST00000518964 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
LINC00861-203ENST00000518964 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
LINC00861-203ENST00000518964 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
LINC00861-203ENST00000518964 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
LINC00861-203ENST00000518964 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
LINC00861-203ENST00000518964 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
LINC00861-203ENST00000518964 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
LINC00861-203ENST00000518964 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
LINC00861-203ENST00000518964 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
LINC00861-203ENST00000518964 DCAF8L1A6NGE4 600 aa15.5■□□□□ 0.07
LINC00861-203ENST00000518964 POTEDQ86YR6 584 aa15.44■□□□□ 0.06
LINC00861-203ENST00000518964 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
LINC00861-203ENST00000518964 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
LINC00861-203ENST00000518964 ZBTB22O15209 634 aa15.33■□□□□ 0.04
LINC00861-203ENST00000518964 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
LINC00861-203ENST00000518964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
LINC00861-203ENST00000518964 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
LINC00861-203ENST00000518964 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
LINC00861-203ENST00000518964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.86□□□□□ -0.03
LINC00861-203ENST00000518964 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
LINC00861-203ENST00000518964 SAMD1Q6SPF0 538 aaPredicted RBP14.81□□□□□ -0.04
LINC00861-203ENST00000518964 RNF39Q9H2S5 420 aa14.81□□□□□ -0.04
LINC00861-203ENST00000518964 ATXN8OSP0DMR3 200 aa14.8□□□□□ -0.04
LINC00861-203ENST00000518964 APLP2Q06481 763 aa14.69□□□□□ -0.06
LINC00861-203ENST00000518964 C1QBPQ07021 282 aaKnown RBP14.66□□□□□ -0.06
LINC00861-203ENST00000518964 ATF5Q9Y2D1 282 aaPredicted RBP14.58□□□□□ -0.08
LINC00861-203ENST00000518964 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
LINC00861-203ENST00000518964 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
LINC00861-203ENST00000518964 CAPN15O75808 1086 aa14.43□□□□□ -0.1
LINC00861-203ENST00000518964 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
LINC00861-203ENST00000518964 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
LINC00861-203ENST00000518964 POLA2Q14181 598 aa14.19□□□□□ -0.14
LINC00861-203ENST00000518964 ABCB7O75027 752 aa14.15□□□□□ -0.14
LINC00861-203ENST00000518964 DSG3P32926 999 aa14.15□□□□□ -0.14
LINC00861-203ENST00000518964 FBLN2P98095 1184 aa14.02□□□□□ -0.17
LINC00861-203ENST00000518964 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
LINC00861-203ENST00000518964 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
LINC00861-203ENST00000518964 FKBP8Q14318 412 aa13.92□□□□□ -0.18
LINC00861-203ENST00000518964 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
LINC00861-203ENST00000518964 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
LINC00861-203ENST00000518964 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
LINC00861-203ENST00000518964 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
LINC00861-203ENST00000518964 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
LINC00861-203ENST00000518964 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
LINC00861-203ENST00000518964 PROM2Q8N271 834 aa13.56□□□□□ -0.24
LINC00861-203ENST00000518964 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
LINC00861-203ENST00000518964 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
LINC00861-203ENST00000518964 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC00861-203ENST00000518964 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
LINC00861-203ENST00000518964 AKT1S1Q96B36 256 aa13.37□□□□□ -0.27
LINC00861-203ENST00000518964 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
LINC00861-203ENST00000518964 REM2Q8IYK8 340 aaPredicted RBP13.22□□□□□ -0.29
LINC00861-203ENST00000518964 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
LINC00861-203ENST00000518964 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
LINC00861-203ENST00000518964 CLEC11AQ9Y240 323 aa13.11□□□□□ -0.31
LINC00861-203ENST00000518964 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
LINC00861-203ENST00000518964 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
LINC00861-203ENST00000518964 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
LINC00861-203ENST00000518964 MIER1Q8N108 512 aa13.02□□□□□ -0.33
LINC00861-203ENST00000518964 IFNLR1Q8IU57 520 aaPredicted RBP13.01□□□□□ -0.33
LINC00861-203ENST00000518964 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
LINC00861-203ENST00000518964 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
LINC00861-203ENST00000518964 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
LINC00861-203ENST00000518964 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
LINC00861-203ENST00000518964 RTN4Q9NQC3 1192 aaKnown RBP12.9□□□□□ -0.34
LINC00861-203ENST00000518964 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
LINC00861-203ENST00000518964 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
LINC00861-203ENST00000518964 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
LINC00861-203ENST00000518964 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
LINC00861-203ENST00000518964 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
LINC00861-203ENST00000518964 MNX1P50219 401 aaPredicted RBP12.76□□□□□ -0.37
LINC00861-203ENST00000518964 PRKAR2AP13861 404 aaKnown RBP12.74□□□□□ -0.37
LINC00861-203ENST00000518964 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
LINC00861-203ENST00000518964 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00861-203ENST00000518964 NUBP1P53384 320 aa12.67□□□□□ -0.38
LINC00861-203ENST00000518964 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
LINC00861-203ENST00000518964 PKD2Q13563 968 aa12.63□□□□□ -0.39
LINC00861-203ENST00000518964 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
LINC00861-203ENST00000518964 GSE1Q14687 1217 aa12.6□□□□□ -0.39
LINC00861-203ENST00000518964 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
LINC00861-203ENST00000518964 RASEFQ8IZ41 740 aa12.58□□□□□ -0.4
LINC00861-203ENST00000518964 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
LINC00861-203ENST00000518964 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
LINC00861-203ENST00000518964 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
LINC00861-203ENST00000518964 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
LINC00861-203ENST00000518964 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms