RNA–Protein interactions for RNA: ENST00000518962.1

LINC00293-202, long intergenic non-protein coding RNA 293, humanhuman

TSL 3

Gene LINC00293, Length 706 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00293-202ENST00000518962 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
LINC00293-202ENST00000518962 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
LINC00293-202ENST00000518962 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
LINC00293-202ENST00000518962 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
LINC00293-202ENST00000518962 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
LINC00293-202ENST00000518962 FOXD1Q16676 465 aa17.49■□□□□ 0.39
LINC00293-202ENST00000518962 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
LINC00293-202ENST00000518962 ADRA2BP18089 450 aa16.97■□□□□ 0.31
LINC00293-202ENST00000518962 PIAS4Q8N2W9 510 aaPredicted RBP16.56■□□□□ 0.24
LINC00293-202ENST00000518962 MSH5O43196 834 aa16.05■□□□□ 0.16
LINC00293-202ENST00000518962 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
LINC00293-202ENST00000518962 KCNA4P22459 653 aa15.65■□□□□ 0.1
LINC00293-202ENST00000518962 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
LINC00293-202ENST00000518962 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
LINC00293-202ENST00000518962 MAPK8IP2Q13387 824 aaPredicted RBP15.33■□□□□ 0.04
LINC00293-202ENST00000518962 CNKSR2Q8WXI2 1034 aa15.29■□□□□ 0.04
LINC00293-202ENST00000518962 NPM3O75607 178 aaKnown RBP15.21■□□□□ 0.03
LINC00293-202ENST00000518962 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
LINC00293-202ENST00000518962 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
LINC00293-202ENST00000518962 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
LINC00293-202ENST00000518962 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
LINC00293-202ENST00000518962 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
LINC00293-202ENST00000518962 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
LINC00293-202ENST00000518962 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
LINC00293-202ENST00000518962 ZBTB22O15209 634 aa14.43□□□□□ -0.1
LINC00293-202ENST00000518962 DCAF8L1A6NGE4 600 aa14.42□□□□□ -0.1
LINC00293-202ENST00000518962 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
LINC00293-202ENST00000518962 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
LINC00293-202ENST00000518962 POTEDQ86YR6 584 aa14.3□□□□□ -0.12
LINC00293-202ENST00000518962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.14□□□□□ -0.15
LINC00293-202ENST00000518962 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
LINC00293-202ENST00000518962 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
LINC00293-202ENST00000518962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
LINC00293-202ENST00000518962 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
LINC00293-202ENST00000518962 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
LINC00293-202ENST00000518962 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
LINC00293-202ENST00000518962 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
LINC00293-202ENST00000518962 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
LINC00293-202ENST00000518962 APLP2Q06481 763 aa13.62□□□□□ -0.23
LINC00293-202ENST00000518962 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
LINC00293-202ENST00000518962 SPINK5Q9NQ38 1064 aaPredicted RBP13.52□□□□□ -0.25
LINC00293-202ENST00000518962 CAPN15O75808 1086 aa13.44□□□□□ -0.26
LINC00293-202ENST00000518962 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
LINC00293-202ENST00000518962 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
LINC00293-202ENST00000518962 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.29
LINC00293-202ENST00000518962 POLA2Q14181 598 aa13.23□□□□□ -0.29
LINC00293-202ENST00000518962 ABCB7O75027 752 aa13.21□□□□□ -0.29
LINC00293-202ENST00000518962 DSG3P32926 999 aa13.18□□□□□ -0.3
LINC00293-202ENST00000518962 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
LINC00293-202ENST00000518962 FKBP8Q14318 412 aa13.07□□□□□ -0.32
LINC00293-202ENST00000518962 FBLN2P98095 1184 aa13.05□□□□□ -0.32
LINC00293-202ENST00000518962 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
LINC00293-202ENST00000518962 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
LINC00293-202ENST00000518962 OSCARQ8IYS5 282 aa12.83□□□□□ -0.36
LINC00293-202ENST00000518962 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
LINC00293-202ENST00000518962 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
LINC00293-202ENST00000518962 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
LINC00293-202ENST00000518962 PROM2Q8N271 834 aa12.7□□□□□ -0.38
LINC00293-202ENST00000518962 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
LINC00293-202ENST00000518962 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
LINC00293-202ENST00000518962 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
LINC00293-202ENST00000518962 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC00293-202ENST00000518962 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
LINC00293-202ENST00000518962 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
LINC00293-202ENST00000518962 VASPP50552 380 aaPredicted RBP12.39□□□□□ -0.43
LINC00293-202ENST00000518962 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
LINC00293-202ENST00000518962 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
LINC00293-202ENST00000518962 SPDYE1Q8NFV5 336 aaPredicted RBP12.28□□□□□ -0.44
LINC00293-202ENST00000518962 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
LINC00293-202ENST00000518962 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
LINC00293-202ENST00000518962 RTN4Q9NQC3 1192 aaKnown RBP12.22□□□□□ -0.45
LINC00293-202ENST00000518962 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
LINC00293-202ENST00000518962 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
LINC00293-202ENST00000518962 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
LINC00293-202ENST00000518962 MIER1Q8N108 512 aa12.14□□□□□ -0.47
LINC00293-202ENST00000518962 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
LINC00293-202ENST00000518962 KLHL34Q8N239 644 aa12.09□□□□□ -0.47
LINC00293-202ENST00000518962 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
LINC00293-202ENST00000518962 SPOCK2Q92563 424 aa12.03□□□□□ -0.48
LINC00293-202ENST00000518962 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
LINC00293-202ENST00000518962 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
LINC00293-202ENST00000518962 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
LINC00293-202ENST00000518962 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
LINC00293-202ENST00000518962 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
LINC00293-202ENST00000518962 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC00293-202ENST00000518962 PKD2Q13563 968 aa11.88□□□□□ -0.51
LINC00293-202ENST00000518962 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
LINC00293-202ENST00000518962 NUBP1P53384 320 aa11.85□□□□□ -0.51
LINC00293-202ENST00000518962 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
LINC00293-202ENST00000518962 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00293-202ENST00000518962 CIZ1Q9ULV3 898 aaPredicted RBP11.81□□□□□ -0.52
LINC00293-202ENST00000518962 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
LINC00293-202ENST00000518962 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
LINC00293-202ENST00000518962 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
LINC00293-202ENST00000518962 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
LINC00293-202ENST00000518962 GSE1Q14687 1217 aa11.75□□□□□ -0.53
LINC00293-202ENST00000518962 DCAF8Q5TAQ9 597 aa11.72□□□□□ -0.53
LINC00293-202ENST00000518962 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
LINC00293-202ENST00000518962 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
LINC00293-202ENST00000518962 RGL2O15211 777 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms