RNA–Protein interactions for RNA: ENST00000518728.1

KHDRBS3-204, Transcript of KH RNA binding domain containing, signal transduction associated 3, humanhuman

TSL 3

Gene KHDRBS3, Length 197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3-204ENST00000518728 AEBP2Q6ZN18 517 aaPredicted RBP30.54■■■□□ 2.48
KHDRBS3-204ENST00000518728 CHIC1Q5VXU3 224 aa29.32■■■□□ 2.28
KHDRBS3-204ENST00000518728 SENP3Q9H4L4 574 aaPredicted RBP26.02■■□□□ 1.76
KHDRBS3-204ENST00000518728 PHF23Q9BUL5 403 aaPredicted RBP25.71■■□□□ 1.71
KHDRBS3-204ENST00000518728 FOXD1Q16676 465 aa24.18■■□□□ 1.46
KHDRBS3-204ENST00000518728 PLPPR3Q6T4P5 718 aa23.56■■□□□ 1.36
KHDRBS3-204ENST00000518728 PPP6R1Q9UPN7 881 aa22.83■■□□□ 1.25
KHDRBS3-204ENST00000518728 ADRA2BP18089 450 aa22.77■■□□□ 1.24
KHDRBS3-204ENST00000518728 PIAS4Q8N2W9 510 aaPredicted RBP22.68■■□□□ 1.22
KHDRBS3-204ENST00000518728 MSH5O43196 834 aa22.54■■□□□ 1.2
KHDRBS3-204ENST00000518728 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
KHDRBS3-204ENST00000518728 SCAF1Q9H7N4 1312 aaKnown RBP20.85■□□□□ 0.93
KHDRBS3-204ENST00000518728 MAPK8IP2Q13387 824 aaPredicted RBP20.8■□□□□ 0.92
KHDRBS3-204ENST00000518728 DMRT2Q9Y5R5 561 aa20.69■□□□□ 0.9
KHDRBS3-204ENST00000518728 PPP4R3CPQ6ZMV5 832 aa20.68■□□□□ 0.9
KHDRBS3-204ENST00000518728 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
KHDRBS3-204ENST00000518728 HOXD11P31277 338 aaPredicted RBP20.05■□□□□ 0.8
KHDRBS3-204ENST00000518728 NCBP3Q53F19 620 aaKnown RBP19.98■□□□□ 0.79
KHDRBS3-204ENST00000518728 RNF216Q9NWF9 866 aaPredicted RBP19.98■□□□□ 0.79
KHDRBS3-204ENST00000518728 DCAF8L1A6NGE4 600 aa19.74■□□□□ 0.75
KHDRBS3-204ENST00000518728 NPM3O75607 178 aaKnown RBP19.71■□□□□ 0.75
KHDRBS3-204ENST00000518728 KCNA4P22459 653 aa19.6■□□□□ 0.73
KHDRBS3-204ENST00000518728 DNAJC5BQ9UF47 199 aa19.34■□□□□ 0.69
KHDRBS3-204ENST00000518728 RNF39Q9H2S5 420 aa19.26■□□□□ 0.67
KHDRBS3-204ENST00000518728 CACNB1Q02641 598 aaPredicted RBP19.1■□□□□ 0.65
KHDRBS3-204ENST00000518728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.64
KHDRBS3-204ENST00000518728 C1QBPQ07021 282 aaKnown RBP18.99■□□□□ 0.63
KHDRBS3-204ENST00000518728 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
KHDRBS3-204ENST00000518728 U3KPZ7 1027 aaPredicted RBP18.73■□□□□ 0.59
KHDRBS3-204ENST00000518728 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
KHDRBS3-204ENST00000518728 SPINK5Q9NQ38 1064 aaPredicted RBP18.34■□□□□ 0.53
KHDRBS3-204ENST00000518728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
KHDRBS3-204ENST00000518728 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
KHDRBS3-204ENST00000518728 CAPN15O75808 1086 aa18.28■□□□□ 0.52
KHDRBS3-204ENST00000518728 APLP2Q06481 763 aa18.26■□□□□ 0.51
KHDRBS3-204ENST00000518728 MYCNP04198 464 aaPredicted RBP18.24■□□□□ 0.51
KHDRBS3-204ENST00000518728 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
KHDRBS3-204ENST00000518728 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
KHDRBS3-204ENST00000518728 DSG3P32926 999 aa18.13■□□□□ 0.49
KHDRBS3-204ENST00000518728 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
KHDRBS3-204ENST00000518728 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
KHDRBS3-204ENST00000518728 ZBTB22O15209 634 aa18.04■□□□□ 0.48
KHDRBS3-204ENST00000518728 ABCB7O75027 752 aa17.88■□□□□ 0.45
KHDRBS3-204ENST00000518728 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
KHDRBS3-204ENST00000518728 POLA2Q14181 598 aa17.65■□□□□ 0.42
KHDRBS3-204ENST00000518728 ATXN8OSP0DMR3 200 aa17.64■□□□□ 0.41
KHDRBS3-204ENST00000518728 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
KHDRBS3-204ENST00000518728 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
KHDRBS3-204ENST00000518728 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
KHDRBS3-204ENST00000518728 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
KHDRBS3-204ENST00000518728 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
KHDRBS3-204ENST00000518728 FBLN2P98095 1184 aa17.06■□□□□ 0.32
KHDRBS3-204ENST00000518728 MKRN4PQ13434 485 aaPredicted RBP16.98■□□□□ 0.31
KHDRBS3-204ENST00000518728 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
KHDRBS3-204ENST00000518728 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
KHDRBS3-204ENST00000518728 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
KHDRBS3-204ENST00000518728 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
KHDRBS3-204ENST00000518728 POTEHQ6S545 545 aa16.86■□□□□ 0.29
KHDRBS3-204ENST00000518728 CHRDL2Q6WN34 429 aa16.79■□□□□ 0.28
KHDRBS3-204ENST00000518728 REM2Q8IYK8 340 aaPredicted RBP16.79■□□□□ 0.28
KHDRBS3-204ENST00000518728 SSUH2Q9Y2M2 353 aa16.68■□□□□ 0.26
KHDRBS3-204ENST00000518728 ZNF692Q9BU19 519 aaPredicted RBP16.66■□□□□ 0.26
KHDRBS3-204ENST00000518728 PITPNM1O00562 1244 aa16.63■□□□□ 0.25
KHDRBS3-204ENST00000518728 SPDYE1Q8NFV5 336 aaPredicted RBP16.47■□□□□ 0.23
KHDRBS3-204ENST00000518728 PIP4P2Q8N4L2 257 aa16.46■□□□□ 0.23
KHDRBS3-204ENST00000518728 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.22
KHDRBS3-204ENST00000518728 FXR2P51116 673 aaKnown RBP eCLIP16.42■□□□□ 0.22
KHDRBS3-204ENST00000518728 CLEC11AQ9Y240 323 aa16.37■□□□□ 0.21
KHDRBS3-204ENST00000518728 SPDYE4A6NLX3 237 aa16.32■□□□□ 0.2
KHDRBS3-204ENST00000518728 PRR29P0C7W0 189 aa16.17■□□□□ 0.18
KHDRBS3-204ENST00000518728 PRKAR2AP13861 404 aaKnown RBP16.17■□□□□ 0.18
KHDRBS3-204ENST00000518728 STAG3Q9UJ98 1225 aa16.06■□□□□ 0.16
KHDRBS3-204ENST00000518728 CHADLQ6NUI6 762 aa16.04■□□□□ 0.16
KHDRBS3-204ENST00000518728 PROM2Q8N271 834 aa16.04■□□□□ 0.16
KHDRBS3-204ENST00000518728 HAX1O00165 279 aa16.02■□□□□ 0.16
KHDRBS3-204ENST00000518728 SP7Q8TDD2 431 aaPredicted RBP15.97■□□□□ 0.15
KHDRBS3-204ENST00000518728 C19orf67A6NJJ6 358 aa15.88■□□□□ 0.13
KHDRBS3-204ENST00000518728 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
KHDRBS3-204ENST00000518728 EVX2Q03828 476 aa15.86■□□□□ 0.13
KHDRBS3-204ENST00000518728 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
KHDRBS3-204ENST00000518728 FKBP8Q14318 412 aa15.82■□□□□ 0.12
KHDRBS3-204ENST00000518728 CD44P16070 742 aaKnown RBP15.69■□□□□ 0.1
KHDRBS3-204ENST00000518728 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
KHDRBS3-204ENST00000518728 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.08
KHDRBS3-204ENST00000518728 GABBR2O75899 941 aa15.54■□□□□ 0.08
KHDRBS3-204ENST00000518728 ZNF579Q8NAF0 562 aaKnown RBP15.51■□□□□ 0.07
KHDRBS3-204ENST00000518728 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
KHDRBS3-204ENST00000518728 PLEKHG5O94827 1062 aa15.49■□□□□ 0.07
KHDRBS3-204ENST00000518728 MIER1Q8N108 512 aa15.49■□□□□ 0.07
KHDRBS3-204ENST00000518728 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
KHDRBS3-204ENST00000518728 CLCN6P51797 869 aa15.45■□□□□ 0.06
KHDRBS3-204ENST00000518728 PLCD3Q8N3E9 789 aa15.42■□□□□ 0.06
KHDRBS3-204ENST00000518728 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
KHDRBS3-204ENST00000518728 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
KHDRBS3-204ENST00000518728 PHF12Q96QT6 1004 aa15.33■□□□□ 0.04
KHDRBS3-204ENST00000518728 TSPYL2Q9H2G4 693 aaPredicted RBP15.28■□□□□ 0.04
KHDRBS3-204ENST00000518728 RASEFQ8IZ41 740 aa15.27■□□□□ 0.04
KHDRBS3-204ENST00000518728 GALR2O43603 387 aaPredicted RBP15.26■□□□□ 0.03
KHDRBS3-204ENST00000518728 CCDC61Q9Y6R9 512 aa15.25■□□□□ 0.03
KHDRBS3-204ENST00000518728 VASPP50552 380 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms