RNA–Protein interactions for RNA: ENST00000518392.1

CA13-204, Transcript of carbonic anhydrase 13, humanhuman

TSL 2

Gene CA13, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA13-204ENST00000518392 AEBP2Q6ZN18 517 aaPredicted RBP31.47■■■□□ 2.63
CA13-204ENST00000518392 CHIC1Q5VXU3 224 aa30.37■■■□□ 2.45
CA13-204ENST00000518392 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
CA13-204ENST00000518392 SENP3Q9H4L4 574 aaPredicted RBP26.63■■□□□ 1.85
CA13-204ENST00000518392 FOXD1Q16676 465 aa24.83■■□□□ 1.57
CA13-204ENST00000518392 PLPPR3Q6T4P5 718 aa24.48■■□□□ 1.51
CA13-204ENST00000518392 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
CA13-204ENST00000518392 ADRA2BP18089 450 aa23.66■■□□□ 1.38
CA13-204ENST00000518392 PIAS4Q8N2W9 510 aaPredicted RBP23.32■■□□□ 1.32
CA13-204ENST00000518392 MSH5O43196 834 aa22.92■■□□□ 1.26
CA13-204ENST00000518392 PPP4R3CPQ6ZMV5 832 aa21.59■■□□□ 1.05
CA13-204ENST00000518392 MAPK8IP2Q13387 824 aaPredicted RBP21.57■■□□□ 1.04
CA13-204ENST00000518392 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
CA13-204ENST00000518392 POTEDQ86YR6 584 aa21.47■■□□□ 1.03
CA13-204ENST00000518392 DMRT2Q9Y5R5 561 aa21.24■□□□□ 0.99
CA13-204ENST00000518392 CNKSR2Q8WXI2 1034 aa21.01■□□□□ 0.95
CA13-204ENST00000518392 NCBP3Q53F19 620 aaKnown RBP20.85■□□□□ 0.93
CA13-204ENST00000518392 KCNA4P22459 653 aa20.8■□□□□ 0.92
CA13-204ENST00000518392 HOXD11P31277 338 aaPredicted RBP20.68■□□□□ 0.9
CA13-204ENST00000518392 RNF216Q9NWF9 866 aaPredicted RBP20.66■□□□□ 0.9
CA13-204ENST00000518392 NPM3O75607 178 aaKnown RBP20.65■□□□□ 0.9
CA13-204ENST00000518392 DCAF8L1A6NGE4 600 aa20.36■□□□□ 0.85
CA13-204ENST00000518392 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
CA13-204ENST00000518392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.74
CA13-204ENST00000518392 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
CA13-204ENST00000518392 RNF39Q9H2S5 420 aa19.66■□□□□ 0.74
CA13-204ENST00000518392 SLC4A2P04920 1241 aa19.6■□□□□ 0.73
CA13-204ENST00000518392 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
CA13-204ENST00000518392 CACNB1Q02641 598 aaPredicted RBP19.36■□□□□ 0.69
CA13-204ENST00000518392 C1QBPQ07021 282 aaKnown RBP19.35■□□□□ 0.69
CA13-204ENST00000518392 ZBTB22O15209 634 aa19.18■□□□□ 0.66
CA13-204ENST00000518392 FOXD4L1Q9NU39 408 aa19.17■□□□□ 0.66
CA13-204ENST00000518392 MYCNP04198 464 aaPredicted RBP19.04■□□□□ 0.64
CA13-204ENST00000518392 SPINK5Q9NQ38 1064 aaPredicted RBP18.98■□□□□ 0.63
CA13-204ENST00000518392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.91■□□□□ 0.62
CA13-204ENST00000518392 HNRNPUL2Q1KMD3 747 aaKnown RBP18.91■□□□□ 0.62
CA13-204ENST00000518392 SAMD1Q6SPF0 538 aaPredicted RBP18.87■□□□□ 0.61
CA13-204ENST00000518392 CAPN15O75808 1086 aa18.86■□□□□ 0.61
CA13-204ENST00000518392 EHMT2Q96KQ7 1210 aa18.86■□□□□ 0.61
CA13-204ENST00000518392 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
CA13-204ENST00000518392 APLP2Q06481 763 aa18.77■□□□□ 0.6
CA13-204ENST00000518392 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
CA13-204ENST00000518392 ATF5Q9Y2D1 282 aaPredicted RBP18.66■□□□□ 0.58
CA13-204ENST00000518392 ZNF219Q9P2Y4 722 aaPredicted RBP18.63■□□□□ 0.57
CA13-204ENST00000518392 DSG3P32926 999 aa18.62■□□□□ 0.57
CA13-204ENST00000518392 ABCB7O75027 752 aa18.53■□□□□ 0.56
CA13-204ENST00000518392 ATXN8OSP0DMR3 200 aa18.46■□□□□ 0.55
CA13-204ENST00000518392 POLA2Q14181 598 aa18.33■□□□□ 0.52
CA13-204ENST00000518392 ZBTB12Q9Y330 459 aaPredicted RBP17.9■□□□□ 0.46
CA13-204ENST00000518392 MKRN4PQ13434 485 aaPredicted RBP17.81■□□□□ 0.44
CA13-204ENST00000518392 OSCARQ8IYS5 282 aa17.76■□□□□ 0.43
CA13-204ENST00000518392 FBLN2P98095 1184 aa17.75■□□□□ 0.43
CA13-204ENST00000518392 RBM42Q9BTD8 480 aaKnown RBP17.67■□□□□ 0.42
CA13-204ENST00000518392 SPDYE2BA6NHP3 402 aa17.45■□□□□ 0.38
CA13-204ENST00000518392 SPDYE6P0CI01 402 aa17.45■□□□□ 0.38
CA13-204ENST00000518392 SPDYE2Q495Y8 402 aa17.45■□□□□ 0.38
CA13-204ENST00000518392 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
CA13-204ENST00000518392 ZNF692Q9BU19 519 aaPredicted RBP17.36■□□□□ 0.37
CA13-204ENST00000518392 SSUH2Q9Y2M2 353 aa17.32■□□□□ 0.36
CA13-204ENST00000518392 REM2Q8IYK8 340 aaPredicted RBP17.29■□□□□ 0.36
CA13-204ENST00000518392 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
CA13-204ENST00000518392 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
CA13-204ENST00000518392 PITPNM1O00562 1244 aa17.13■□□□□ 0.33
CA13-204ENST00000518392 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
CA13-204ENST00000518392 SPDYE1Q8NFV5 336 aaPredicted RBP17■□□□□ 0.31
CA13-204ENST00000518392 CLEC11AQ9Y240 323 aa16.99■□□□□ 0.31
CA13-204ENST00000518392 FKBP8Q14318 412 aa16.98■□□□□ 0.31
CA13-204ENST00000518392 POTEHQ6S545 545 aa16.92■□□□□ 0.3
CA13-204ENST00000518392 PROM2Q8N271 834 aa16.89■□□□□ 0.29
CA13-204ENST00000518392 PIP4P2Q8N4L2 257 aa16.87■□□□□ 0.29
CA13-204ENST00000518392 FXR2P51116 673 aaKnown RBP eCLIP16.83■□□□□ 0.28
CA13-204ENST00000518392 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
CA13-204ENST00000518392 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
CA13-204ENST00000518392 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
CA13-204ENST00000518392 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
CA13-204ENST00000518392 CREBZFQ9NS37 354 aa16.54■□□□□ 0.24
CA13-204ENST00000518392 FARP1Q9Y4F1 1045 aaPredicted RBP16.41■□□□□ 0.22
CA13-204ENST00000518392 HAX1O00165 279 aa16.37■□□□□ 0.21
CA13-204ENST00000518392 MNX1P50219 401 aaPredicted RBP16.34■□□□□ 0.21
CA13-204ENST00000518392 FBXO3Q9UK99 471 aa16.34■□□□□ 0.21
CA13-204ENST00000518392 MIER1Q8N108 512 aa16.33■□□□□ 0.2
CA13-204ENST00000518392 EVX2Q03828 476 aa16.3■□□□□ 0.2
CA13-204ENST00000518392 C19orf67A6NJJ6 358 aa16.28■□□□□ 0.2
CA13-204ENST00000518392 PLCD3Q8N3E9 789 aa16.27■□□□□ 0.2
CA13-204ENST00000518392 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
CA13-204ENST00000518392 PLEKHG5O94827 1062 aa16.18■□□□□ 0.18
CA13-204ENST00000518392 CD44P16070 742 aaKnown RBP16.17■□□□□ 0.18
CA13-204ENST00000518392 NPM1P06748 294 aaKnown RBP eCLIP16.15■□□□□ 0.18
CA13-204ENST00000518392 SP7Q8TDD2 431 aaPredicted RBP16.12■□□□□ 0.17
CA13-204ENST00000518392 ZRANB1Q9UGI0 708 aa16.04■□□□□ 0.16
CA13-204ENST00000518392 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
CA13-204ENST00000518392 RASEFQ8IZ41 740 aa16.01■□□□□ 0.15
CA13-204ENST00000518392 IFNLR1Q8IU57 520 aaPredicted RBP16■□□□□ 0.15
CA13-204ENST00000518392 NUBP1P53384 320 aa15.98■□□□□ 0.15
CA13-204ENST00000518392 KLHL34Q8N239 644 aa15.98■□□□□ 0.15
CA13-204ENST00000518392 TSPYL2Q9H2G4 693 aaPredicted RBP15.98■□□□□ 0.15
CA13-204ENST00000518392 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
CA13-204ENST00000518392 ZNF579Q8NAF0 562 aaKnown RBP15.94■□□□□ 0.14
CA13-204ENST00000518392 PHF12Q96QT6 1004 aa15.91■□□□□ 0.14
CA13-204ENST00000518392 GABBR2O75899 941 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms