RNA–Protein interactions for RNA: ENST00000518358.1

RAD54B-204, Transcript of RAD54 homolog B, humanhuman

TSL 3

Gene RAD54B, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54B-204ENST00000518358 AEBP2Q6ZN18 517 aaPredicted RBP26.32■■□□□ 1.8
RAD54B-204ENST00000518358 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.66
RAD54B-204ENST00000518358 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
RAD54B-204ENST00000518358 SENP3Q9H4L4 574 aaPredicted RBP22.28■■□□□ 1.16
RAD54B-204ENST00000518358 FOXD1Q16676 465 aa20.78■□□□□ 0.92
RAD54B-204ENST00000518358 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
RAD54B-204ENST00000518358 PPP6R1Q9UPN7 881 aa19.83■□□□□ 0.77
RAD54B-204ENST00000518358 ADRA2BP18089 450 aa19.75■□□□□ 0.75
RAD54B-204ENST00000518358 PIAS4Q8N2W9 510 aaPredicted RBP19.46■□□□□ 0.71
RAD54B-204ENST00000518358 MSH5O43196 834 aa19.43■□□□□ 0.7
RAD54B-204ENST00000518358 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
RAD54B-204ENST00000518358 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
RAD54B-204ENST00000518358 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
RAD54B-204ENST00000518358 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
RAD54B-204ENST00000518358 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
RAD54B-204ENST00000518358 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
RAD54B-204ENST00000518358 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
RAD54B-204ENST00000518358 KCNA4P22459 653 aa17.31■□□□□ 0.36
RAD54B-204ENST00000518358 HOXD11P31277 338 aaPredicted RBP17.31■□□□□ 0.36
RAD54B-204ENST00000518358 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
RAD54B-204ENST00000518358 NPM3O75607 178 aaKnown RBP17.23■□□□□ 0.35
RAD54B-204ENST00000518358 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
RAD54B-204ENST00000518358 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
RAD54B-204ENST00000518358 CACNB1Q02641 598 aaPredicted RBP16.67■□□□□ 0.26
RAD54B-204ENST00000518358 RNF39Q9H2S5 420 aa16.61■□□□□ 0.25
RAD54B-204ENST00000518358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.22
RAD54B-204ENST00000518358 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
RAD54B-204ENST00000518358 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
RAD54B-204ENST00000518358 C1QBPQ07021 282 aaKnown RBP16.33■□□□□ 0.2
RAD54B-204ENST00000518358 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
RAD54B-204ENST00000518358 ZBTB22O15209 634 aa15.96■□□□□ 0.15
RAD54B-204ENST00000518358 FOXD4L1Q9NU39 408 aa15.96■□□□□ 0.15
RAD54B-204ENST00000518358 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
RAD54B-204ENST00000518358 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
RAD54B-204ENST00000518358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
RAD54B-204ENST00000518358 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
RAD54B-204ENST00000518358 SAMD1Q6SPF0 538 aaPredicted RBP15.76■□□□□ 0.11
RAD54B-204ENST00000518358 CAPN15O75808 1086 aa15.71■□□□□ 0.11
RAD54B-204ENST00000518358 APLP2Q06481 763 aa15.67■□□□□ 0.1
RAD54B-204ENST00000518358 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
RAD54B-204ENST00000518358 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
RAD54B-204ENST00000518358 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
RAD54B-204ENST00000518358 DSG3P32926 999 aa15.58■□□□□ 0.08
RAD54B-204ENST00000518358 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
RAD54B-204ENST00000518358 ZNF219Q9P2Y4 722 aaPredicted RBP15.55■□□□□ 0.08
RAD54B-204ENST00000518358 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
RAD54B-204ENST00000518358 ABCB7O75027 752 aa15.42■□□□□ 0.06
RAD54B-204ENST00000518358 POLA2Q14181 598 aa15.3■□□□□ 0.04
RAD54B-204ENST00000518358 POTEHQ6S545 545 aa14.98□□□□□ -0.01
RAD54B-204ENST00000518358 ZBTB12Q9Y330 459 aaPredicted RBP14.96□□□□□ -0.01
RAD54B-204ENST00000518358 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
RAD54B-204ENST00000518358 FBLN2P98095 1184 aa14.8□□□□□ -0.04
RAD54B-204ENST00000518358 OSCARQ8IYS5 282 aa14.78□□□□□ -0.04
RAD54B-204ENST00000518358 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
RAD54B-204ENST00000518358 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.08
RAD54B-204ENST00000518358 SPDYE6P0CI01 402 aa14.58□□□□□ -0.08
RAD54B-204ENST00000518358 SPDYE2Q495Y8 402 aa14.58□□□□□ -0.08
RAD54B-204ENST00000518358 AKT1S1Q96B36 256 aa14.58□□□□□ -0.08
RAD54B-204ENST00000518358 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
RAD54B-204ENST00000518358 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
RAD54B-204ENST00000518358 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
RAD54B-204ENST00000518358 SSUH2Q9Y2M2 353 aa14.47□□□□□ -0.09
RAD54B-204ENST00000518358 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
RAD54B-204ENST00000518358 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
RAD54B-204ENST00000518358 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAD54B-204ENST00000518358 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
RAD54B-204ENST00000518358 CLEC11AQ9Y240 323 aa14.14□□□□□ -0.15
RAD54B-204ENST00000518358 PIP4P2Q8N4L2 257 aa14.13□□□□□ -0.15
RAD54B-204ENST00000518358 PROM2Q8N271 834 aa14.11□□□□□ -0.15
RAD54B-204ENST00000518358 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.15
RAD54B-204ENST00000518358 FKBP8Q14318 412 aa14.08□□□□□ -0.16
RAD54B-204ENST00000518358 SP7Q8TDD2 431 aaPredicted RBP14□□□□□ -0.17
RAD54B-204ENST00000518358 PRR29P0C7W0 189 aa13.99□□□□□ -0.17
RAD54B-204ENST00000518358 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
RAD54B-204ENST00000518358 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
RAD54B-204ENST00000518358 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
RAD54B-204ENST00000518358 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
RAD54B-204ENST00000518358 HAX1O00165 279 aa13.8□□□□□ -0.2
RAD54B-204ENST00000518358 EVX2Q03828 476 aa13.73□□□□□ -0.21
RAD54B-204ENST00000518358 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
RAD54B-204ENST00000518358 MNX1P50219 401 aaPredicted RBP13.66□□□□□ -0.22
RAD54B-204ENST00000518358 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
RAD54B-204ENST00000518358 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
RAD54B-204ENST00000518358 MIER1Q8N108 512 aa13.6□□□□□ -0.23
RAD54B-204ENST00000518358 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
RAD54B-204ENST00000518358 NPM1P06748 294 aaKnown RBP eCLIP13.49□□□□□ -0.25
RAD54B-204ENST00000518358 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
RAD54B-204ENST00000518358 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
RAD54B-204ENST00000518358 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
RAD54B-204ENST00000518358 GABBR2O75899 941 aa13.39□□□□□ -0.27
RAD54B-204ENST00000518358 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
RAD54B-204ENST00000518358 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
RAD54B-204ENST00000518358 NUBP1P53384 320 aa13.34□□□□□ -0.27
RAD54B-204ENST00000518358 RASEFQ8IZ41 740 aa13.33□□□□□ -0.28
RAD54B-204ENST00000518358 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
RAD54B-204ENST00000518358 ZNF579Q8NAF0 562 aaKnown RBP13.31□□□□□ -0.28
RAD54B-204ENST00000518358 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
RAD54B-204ENST00000518358 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
RAD54B-204ENST00000518358 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
RAD54B-204ENST00000518358 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms