RNA–Protein interactions for RNA: ENST00000518261.1

XKR4-202, Transcript of XK related 4, humanhuman

TSL 2

Gene XKR4, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XKR4-202ENST00000518261 AEBP2Q6ZN18 517 aaPredicted RBP31.77■■■□□ 2.68
XKR4-202ENST00000518261 CHIC1Q5VXU3 224 aa30.54■■■□□ 2.48
XKR4-202ENST00000518261 PHF23Q9BUL5 403 aaPredicted RBP26.92■■□□□ 1.9
XKR4-202ENST00000518261 SENP3Q9H4L4 574 aaPredicted RBP26.85■■□□□ 1.89
XKR4-202ENST00000518261 FOXD1Q16676 465 aa25.08■■□□□ 1.61
XKR4-202ENST00000518261 PLPPR3Q6T4P5 718 aa24.58■■□□□ 1.53
XKR4-202ENST00000518261 PPP6R1Q9UPN7 881 aa23.91■■□□□ 1.42
XKR4-202ENST00000518261 ADRA2BP18089 450 aa23.82■■□□□ 1.4
XKR4-202ENST00000518261 PIAS4Q8N2W9 510 aaPredicted RBP23.49■■□□□ 1.35
XKR4-202ENST00000518261 MSH5O43196 834 aa23.15■■□□□ 1.3
XKR4-202ENST00000518261 POTEDQ86YR6 584 aa21.88■■□□□ 1.09
XKR4-202ENST00000518261 MAPK8IP2Q13387 824 aaPredicted RBP21.77■■□□□ 1.08
XKR4-202ENST00000518261 PPP4R3CPQ6ZMV5 832 aa21.66■■□□□ 1.06
XKR4-202ENST00000518261 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
XKR4-202ENST00000518261 DMRT2Q9Y5R5 561 aa21.41■■□□□ 1.02
XKR4-202ENST00000518261 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
XKR4-202ENST00000518261 NCBP3Q53F19 620 aaKnown RBP20.87■□□□□ 0.93
XKR4-202ENST00000518261 HOXD11P31277 338 aaPredicted RBP20.83■□□□□ 0.93
XKR4-202ENST00000518261 RNF216Q9NWF9 866 aaPredicted RBP20.78■□□□□ 0.92
XKR4-202ENST00000518261 KCNA4P22459 653 aa20.76■□□□□ 0.91
XKR4-202ENST00000518261 NPM3O75607 178 aaKnown RBP20.69■□□□□ 0.9
XKR4-202ENST00000518261 DCAF8L1A6NGE4 600 aa20.5■□□□□ 0.87
XKR4-202ENST00000518261 DNAJC5BQ9UF47 199 aa20.08■□□□□ 0.81
XKR4-202ENST00000518261 RNF39Q9H2S5 420 aa19.88■□□□□ 0.77
XKR4-202ENST00000518261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.81■□□□□ 0.76
XKR4-202ENST00000518261 SLC4A2P04920 1241 aa19.68■□□□□ 0.74
XKR4-202ENST00000518261 SLC4A1APQ9BWU0 796 aaKnown RBP19.63■□□□□ 0.73
XKR4-202ENST00000518261 CACNB1Q02641 598 aaPredicted RBP19.62■□□□□ 0.73
XKR4-202ENST00000518261 C1QBPQ07021 282 aaKnown RBP19.56■□□□□ 0.72
XKR4-202ENST00000518261 U3KPZ7 1027 aaPredicted RBP19.51■□□□□ 0.71
XKR4-202ENST00000518261 ZBTB22O15209 634 aa19.13■□□□□ 0.65
XKR4-202ENST00000518261 FOXD4L1Q9NU39 408 aa19.13■□□□□ 0.65
XKR4-202ENST00000518261 SPINK5Q9NQ38 1064 aaPredicted RBP19.12■□□□□ 0.65
XKR4-202ENST00000518261 MYCNP04198 464 aaPredicted RBP19.04■□□□□ 0.64
XKR4-202ENST00000518261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
XKR4-202ENST00000518261 CAPN15O75808 1086 aa18.98■□□□□ 0.63
XKR4-202ENST00000518261 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
XKR4-202ENST00000518261 SAMD1Q6SPF0 538 aaPredicted RBP18.93■□□□□ 0.62
XKR4-202ENST00000518261 APLP2Q06481 763 aa18.83■□□□□ 0.6
XKR4-202ENST00000518261 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
XKR4-202ENST00000518261 DSG3P32926 999 aa18.81■□□□□ 0.6
XKR4-202ENST00000518261 ZNF219Q9P2Y4 722 aaPredicted RBP18.72■□□□□ 0.59
XKR4-202ENST00000518261 ATF5Q9Y2D1 282 aaPredicted RBP18.72■□□□□ 0.59
XKR4-202ENST00000518261 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
XKR4-202ENST00000518261 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
XKR4-202ENST00000518261 ABCB7O75027 752 aa18.63■□□□□ 0.57
XKR4-202ENST00000518261 ATXN8OSP0DMR3 200 aa18.47■□□□□ 0.55
XKR4-202ENST00000518261 POLA2Q14181 598 aa18.44■□□□□ 0.54
XKR4-202ENST00000518261 ZBTB12Q9Y330 459 aaPredicted RBP17.95■□□□□ 0.46
XKR4-202ENST00000518261 MKRN4PQ13434 485 aaPredicted RBP17.85■□□□□ 0.45
XKR4-202ENST00000518261 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
XKR4-202ENST00000518261 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
XKR4-202ENST00000518261 FBLN2P98095 1184 aa17.77■□□□□ 0.44
XKR4-202ENST00000518261 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
XKR4-202ENST00000518261 SPDYE2BA6NHP3 402 aa17.51■□□□□ 0.39
XKR4-202ENST00000518261 SPDYE6P0CI01 402 aa17.51■□□□□ 0.39
XKR4-202ENST00000518261 SPDYE2Q495Y8 402 aa17.51■□□□□ 0.39
XKR4-202ENST00000518261 REM2Q8IYK8 340 aaPredicted RBP17.44■□□□□ 0.38
XKR4-202ENST00000518261 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
XKR4-202ENST00000518261 SSUH2Q9Y2M2 353 aa17.38■□□□□ 0.37
XKR4-202ENST00000518261 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
XKR4-202ENST00000518261 PITPNM1O00562 1244 aa17.24■□□□□ 0.35
XKR4-202ENST00000518261 POTEHQ6S545 545 aa17.21■□□□□ 0.35
XKR4-202ENST00000518261 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
XKR4-202ENST00000518261 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
XKR4-202ENST00000518261 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
XKR4-202ENST00000518261 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.32
XKR4-202ENST00000518261 PIP4P2Q8N4L2 257 aa17.03■□□□□ 0.32
XKR4-202ENST00000518261 FXR2P51116 673 aaKnown RBP eCLIP17.01■□□□□ 0.31
XKR4-202ENST00000518261 PROM2Q8N271 834 aa16.87■□□□□ 0.29
XKR4-202ENST00000518261 PRR29P0C7W0 189 aa16.86■□□□□ 0.29
XKR4-202ENST00000518261 FKBP8Q14318 412 aa16.85■□□□□ 0.29
XKR4-202ENST00000518261 PRKAR2AP13861 404 aaKnown RBP16.79■□□□□ 0.28
XKR4-202ENST00000518261 CHADLQ6NUI6 762 aa16.77■□□□□ 0.28
XKR4-202ENST00000518261 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
XKR4-202ENST00000518261 CREBZFQ9NS37 354 aa16.61■□□□□ 0.25
XKR4-202ENST00000518261 HAX1O00165 279 aa16.56■□□□□ 0.24
XKR4-202ENST00000518261 EVX2Q03828 476 aa16.52■□□□□ 0.24
XKR4-202ENST00000518261 FARP1Q9Y4F1 1045 aaPredicted RBP16.51■□□□□ 0.23
XKR4-202ENST00000518261 C19orf67A6NJJ6 358 aa16.43■□□□□ 0.22
XKR4-202ENST00000518261 MNX1P50219 401 aaPredicted RBP16.41■□□□□ 0.22
XKR4-202ENST00000518261 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
XKR4-202ENST00000518261 MIER1Q8N108 512 aa16.34■□□□□ 0.21
XKR4-202ENST00000518261 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
XKR4-202ENST00000518261 FBXO3Q9UK99 471 aa16.26■□□□□ 0.19
XKR4-202ENST00000518261 PLCD3Q8N3E9 789 aa16.23■□□□□ 0.19
XKR4-202ENST00000518261 NPM1P06748 294 aaKnown RBP eCLIP16.21■□□□□ 0.19
XKR4-202ENST00000518261 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
XKR4-202ENST00000518261 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
XKR4-202ENST00000518261 VASPP50552 380 aaPredicted RBP16.11■□□□□ 0.17
XKR4-202ENST00000518261 GABBR2O75899 941 aa16.09■□□□□ 0.17
XKR4-202ENST00000518261 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
XKR4-202ENST00000518261 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
XKR4-202ENST00000518261 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
XKR4-202ENST00000518261 NUBP1P53384 320 aa16.01■□□□□ 0.15
XKR4-202ENST00000518261 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
XKR4-202ENST00000518261 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
XKR4-202ENST00000518261 PHF12Q96QT6 1004 aa15.98■□□□□ 0.15
XKR4-202ENST00000518261 IFNLR1Q8IU57 520 aaPredicted RBP15.95■□□□□ 0.14
XKR4-202ENST00000518261 CCDC61Q9Y6R9 512 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms