RNA–Protein interactions for RNA: ENST00000518141.1

CPEB4-204, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 3

Gene CPEB4, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-204ENST00000518141 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
CPEB4-204ENST00000518141 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
CPEB4-204ENST00000518141 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
CPEB4-204ENST00000518141 PHF23Q9BUL5 403 aaPredicted RBP22.17■■□□□ 1.14
CPEB4-204ENST00000518141 FOXD1Q16676 465 aa20.77■□□□□ 0.92
CPEB4-204ENST00000518141 PLPPR3Q6T4P5 718 aa20.42■□□□□ 0.86
CPEB4-204ENST00000518141 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
CPEB4-204ENST00000518141 ADRA2BP18089 450 aa19.63■□□□□ 0.73
CPEB4-204ENST00000518141 PIAS4Q8N2W9 510 aaPredicted RBP19.5■□□□□ 0.71
CPEB4-204ENST00000518141 MSH5O43196 834 aa19.38■□□□□ 0.69
CPEB4-204ENST00000518141 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
CPEB4-204ENST00000518141 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
CPEB4-204ENST00000518141 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
CPEB4-204ENST00000518141 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
CPEB4-204ENST00000518141 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
CPEB4-204ENST00000518141 CNKSR2Q8WXI2 1034 aa17.53■□□□□ 0.4
CPEB4-204ENST00000518141 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
CPEB4-204ENST00000518141 HOXD11P31277 338 aaPredicted RBP17.31■□□□□ 0.36
CPEB4-204ENST00000518141 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
CPEB4-204ENST00000518141 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
CPEB4-204ENST00000518141 KCNA4P22459 653 aa17.03■□□□□ 0.32
CPEB4-204ENST00000518141 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
CPEB4-204ENST00000518141 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
CPEB4-204ENST00000518141 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
CPEB4-204ENST00000518141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.23
CPEB4-204ENST00000518141 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
CPEB4-204ENST00000518141 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
CPEB4-204ENST00000518141 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
CPEB4-204ENST00000518141 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
CPEB4-204ENST00000518141 U3KPZ7 1027 aaPredicted RBP16.13■□□□□ 0.17
CPEB4-204ENST00000518141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
CPEB4-204ENST00000518141 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
CPEB4-204ENST00000518141 APLP2Q06481 763 aa15.85■□□□□ 0.13
CPEB4-204ENST00000518141 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
CPEB4-204ENST00000518141 MYCNP04198 464 aaPredicted RBP15.82■□□□□ 0.12
CPEB4-204ENST00000518141 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
CPEB4-204ENST00000518141 SPINK5Q9NQ38 1064 aaPredicted RBP15.76■□□□□ 0.11
CPEB4-204ENST00000518141 CAPN15O75808 1086 aa15.75■□□□□ 0.11
CPEB4-204ENST00000518141 ZBTB22O15209 634 aa15.63■□□□□ 0.09
CPEB4-204ENST00000518141 ZNF219Q9P2Y4 722 aaPredicted RBP15.63■□□□□ 0.09
CPEB4-204ENST00000518141 DSG3P32926 999 aa15.59■□□□□ 0.09
CPEB4-204ENST00000518141 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
CPEB4-204ENST00000518141 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
CPEB4-204ENST00000518141 ABCB7O75027 752 aa15.37■□□□□ 0.05
CPEB4-204ENST00000518141 ATF5Q9Y2D1 282 aaPredicted RBP15.32■□□□□ 0.04
CPEB4-204ENST00000518141 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
CPEB4-204ENST00000518141 POLA2Q14181 598 aa15.26■□□□□ 0.03
CPEB4-204ENST00000518141 EHMT2Q96KQ7 1210 aa15.22■□□□□ 0.03
CPEB4-204ENST00000518141 ZBTB12Q9Y330 459 aaPredicted RBP15.07■□□□□ 0
CPEB4-204ENST00000518141 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
CPEB4-204ENST00000518141 FBLN2P98095 1184 aa14.82□□□□□ -0.04
CPEB4-204ENST00000518141 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
CPEB4-204ENST00000518141 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
CPEB4-204ENST00000518141 AKT1S1Q96B36 256 aa14.65□□□□□ -0.06
CPEB4-204ENST00000518141 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
CPEB4-204ENST00000518141 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
CPEB4-204ENST00000518141 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
CPEB4-204ENST00000518141 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
CPEB4-204ENST00000518141 ZNF692Q9BU19 519 aaPredicted RBP14.45□□□□□ -0.1
CPEB4-204ENST00000518141 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
CPEB4-204ENST00000518141 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
CPEB4-204ENST00000518141 POTEHQ6S545 545 aa14.37□□□□□ -0.11
CPEB4-204ENST00000518141 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
CPEB4-204ENST00000518141 SPDYE1Q8NFV5 336 aaPredicted RBP14.25□□□□□ -0.13
CPEB4-204ENST00000518141 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
CPEB4-204ENST00000518141 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
CPEB4-204ENST00000518141 CLEC11AQ9Y240 323 aa14.14□□□□□ -0.15
CPEB4-204ENST00000518141 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.15
CPEB4-204ENST00000518141 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
CPEB4-204ENST00000518141 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
CPEB4-204ENST00000518141 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
CPEB4-204ENST00000518141 PROM2Q8N271 834 aa13.95□□□□□ -0.18
CPEB4-204ENST00000518141 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
CPEB4-204ENST00000518141 FKBP8Q14318 412 aa13.82□□□□□ -0.2
CPEB4-204ENST00000518141 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
CPEB4-204ENST00000518141 HAX1O00165 279 aa13.78□□□□□ -0.2
CPEB4-204ENST00000518141 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
CPEB4-204ENST00000518141 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
CPEB4-204ENST00000518141 C19orf67A6NJJ6 358 aa13.66□□□□□ -0.22
CPEB4-204ENST00000518141 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
CPEB4-204ENST00000518141 EVX2Q03828 476 aa13.57□□□□□ -0.24
CPEB4-204ENST00000518141 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
CPEB4-204ENST00000518141 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
CPEB4-204ENST00000518141 FBXO3Q9UK99 471 aa13.54□□□□□ -0.24
CPEB4-204ENST00000518141 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
CPEB4-204ENST00000518141 CD44P16070 742 aaKnown RBP13.51□□□□□ -0.25
CPEB4-204ENST00000518141 MIER1Q8N108 512 aa13.51□□□□□ -0.25
CPEB4-204ENST00000518141 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
CPEB4-204ENST00000518141 CLCN6P51797 869 aa13.41□□□□□ -0.26
CPEB4-204ENST00000518141 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
CPEB4-204ENST00000518141 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
CPEB4-204ENST00000518141 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
CPEB4-204ENST00000518141 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
CPEB4-204ENST00000518141 GABBR2O75899 941 aa13.35□□□□□ -0.27
CPEB4-204ENST00000518141 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
CPEB4-204ENST00000518141 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
CPEB4-204ENST00000518141 NUBP1P53384 320 aa13.2□□□□□ -0.3
CPEB4-204ENST00000518141 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
CPEB4-204ENST00000518141 PHF12Q96QT6 1004 aa13.18□□□□□ -0.3
CPEB4-204ENST00000518141 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms