RNA–Protein interactions for RNA: ENST00000518110.1

SREK1-204, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 763 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-204ENST00000518110 AEBP2Q6ZN18 517 aaPredicted RBP27.52■■■□□ 2
SREK1-204ENST00000518110 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
SREK1-204ENST00000518110 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
SREK1-204ENST00000518110 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
SREK1-204ENST00000518110 FOXD1Q16676 465 aa21.86■■□□□ 1.09
SREK1-204ENST00000518110 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
SREK1-204ENST00000518110 POTEDQ86YR6 584 aa20.68■□□□□ 0.9
SREK1-204ENST00000518110 PPP6R1Q9UPN7 881 aa20.49■□□□□ 0.87
SREK1-204ENST00000518110 MSH5O43196 834 aa20.42■□□□□ 0.86
SREK1-204ENST00000518110 PIAS4Q8N2W9 510 aaPredicted RBP20.42■□□□□ 0.86
SREK1-204ENST00000518110 ADRA2BP18089 450 aa20.41■□□□□ 0.86
SREK1-204ENST00000518110 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
SREK1-204ENST00000518110 SCAF1Q9H7N4 1312 aaKnown RBP18.69■□□□□ 0.58
SREK1-204ENST00000518110 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
SREK1-204ENST00000518110 PPP4R3CPQ6ZMV5 832 aa18.54■□□□□ 0.56
SREK1-204ENST00000518110 KCNA4P22459 653 aa18.15■□□□□ 0.5
SREK1-204ENST00000518110 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
SREK1-204ENST00000518110 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
SREK1-204ENST00000518110 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
SREK1-204ENST00000518110 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
SREK1-204ENST00000518110 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
SREK1-204ENST00000518110 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
SREK1-204ENST00000518110 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
SREK1-204ENST00000518110 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
SREK1-204ENST00000518110 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
SREK1-204ENST00000518110 SLC4A1APQ9BWU0 796 aaKnown RBP17.23■□□□□ 0.35
SREK1-204ENST00000518110 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
SREK1-204ENST00000518110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.325e-14■■□□□ 14.2
SREK1-204ENST00000518110 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
SREK1-204ENST00000518110 ZBTB22O15209 634 aa16.76■□□□□ 0.27
SREK1-204ENST00000518110 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
SREK1-204ENST00000518110 EHMT2Q96KQ7 1210 aa16.71■□□□□ 0.27
SREK1-204ENST00000518110 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
SREK1-204ENST00000518110 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
SREK1-204ENST00000518110 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
SREK1-204ENST00000518110 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
SREK1-204ENST00000518110 CAPN15O75808 1086 aa16.43■□□□□ 0.22
SREK1-204ENST00000518110 DSG3P32926 999 aa16.36■□□□□ 0.21
SREK1-204ENST00000518110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
SREK1-204ENST00000518110 APLP2Q06481 763 aa16.3■□□□□ 0.2
SREK1-204ENST00000518110 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
SREK1-204ENST00000518110 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
SREK1-204ENST00000518110 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
SREK1-204ENST00000518110 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
SREK1-204ENST00000518110 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
SREK1-204ENST00000518110 ABCB7O75027 752 aa16.05■□□□□ 0.16
SREK1-204ENST00000518110 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
SREK1-204ENST00000518110 POTEHQ6S545 545 aa15.87■□□□□ 0.13
SREK1-204ENST00000518110 POLA2Q14181 598 aa15.78■□□□□ 0.12
SREK1-204ENST00000518110 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
SREK1-204ENST00000518110 ZBTB12Q9Y330 459 aaPredicted RBP15.48■□□□□ 0.07
SREK1-204ENST00000518110 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
SREK1-204ENST00000518110 OSCARQ8IYS5 282 aa15.27■□□□□ 0.04
SREK1-204ENST00000518110 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
SREK1-204ENST00000518110 FBLN2P98095 1184 aa15.25■□□□□ 0.03
SREK1-204ENST00000518110 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
SREK1-204ENST00000518110 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
SREK1-204ENST00000518110 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
SREK1-204ENST00000518110 SPDYE6P0CI01 402 aa15.02■□□□□ -0
SREK1-204ENST00000518110 SPDYE2Q495Y8 402 aa15.02■□□□□ -0
SREK1-204ENST00000518110 FKBP8Q14318 412 aa14.96□□□□□ -0.01
SREK1-204ENST00000518110 SPDYE4A6NLX3 237 aa14.94□□□□□ -0.02
SREK1-204ENST00000518110 PITPNM1O00562 1244 aa14.94□□□□□ -0.02
SREK1-204ENST00000518110 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
SREK1-204ENST00000518110 PIP4P2Q8N4L2 257 aa14.88□□□□□ -0.03
SREK1-204ENST00000518110 PROM2Q8N271 834 aa14.86□□□□□ -0.03
SREK1-204ENST00000518110 ZNF692Q9BU19 519 aaPredicted RBP14.84□□□□□ -0.03
SREK1-204ENST00000518110 FXR2P51116 673 aaKnown RBP eCLIP14.83□□□□□ -0.04
SREK1-204ENST00000518110 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
SREK1-204ENST00000518110 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
SREK1-204ENST00000518110 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
SREK1-204ENST00000518110 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
SREK1-204ENST00000518110 HAX1O00165 279 aa14.57□□□□□ -0.08
SREK1-204ENST00000518110 PRKAR2AP13861 404 aaKnown RBP14.55□□□□□ -0.08
SREK1-204ENST00000518110 PRR29P0C7W0 189 aa14.46□□□□□ -0.09
SREK1-204ENST00000518110 EVX2Q03828 476 aa14.42□□□□□ -0.1
SREK1-204ENST00000518110 STAG3Q9UJ98 1225 aa14.42□□□□□ -0.1
SREK1-204ENST00000518110 FBXO3Q9UK99 471 aa14.41□□□□□ -0.1
SREK1-204ENST00000518110 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
SREK1-204ENST00000518110 C19orf67A6NJJ6 358 aa14.34□□□□□ -0.11
SREK1-204ENST00000518110 VASPP50552 380 aaPredicted RBP14.27□□□□□ -0.13
SREK1-204ENST00000518110 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
SREK1-204ENST00000518110 CREBZFQ9NS37 354 aa14.17□□□□□ -0.14
SREK1-204ENST00000518110 GABBR2O75899 941 aa14.1□□□□□ -0.15
SREK1-204ENST00000518110 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
SREK1-204ENST00000518110 MNX1P50219 401 aaPredicted RBP14.09□□□□□ -0.15
SREK1-204ENST00000518110 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
SREK1-204ENST00000518110 MIER1Q8N108 512 aa14.08□□□□□ -0.16
SREK1-204ENST00000518110 PLCD3Q8N3E9 789 aa14.07□□□□□ -0.16
SREK1-204ENST00000518110 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
SREK1-204ENST00000518110 ZBTB47Q9UFB7 747 aaPredicted RBP13.96□□□□□ -0.17
SREK1-204ENST00000518110 CLCN6P51797 869 aa13.93□□□□□ -0.18
SREK1-204ENST00000518110 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
SREK1-204ENST00000518110 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
SREK1-204ENST00000518110 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
SREK1-204ENST00000518110 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
SREK1-204ENST00000518110 NUBP1P53384 320 aa13.86□□□□□ -0.19
SREK1-204ENST00000518110 SPOCK2Q92563 424 aa13.86□□□□□ -0.19
SREK1-204ENST00000518110 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
SREK1-204ENST00000518110 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms