RNA–Protein interactions for RNA: ENST00000517821.1

RMDN1-205, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 2

Gene RMDN1, Length 407 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-205ENST00000517821 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
RMDN1-205ENST00000517821 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
RMDN1-205ENST00000517821 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
RMDN1-205ENST00000517821 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
RMDN1-205ENST00000517821 FOXD1Q16676 465 aa19.25■□□□□ 0.67
RMDN1-205ENST00000517821 PLPPR3Q6T4P5 718 aa18.86■□□□□ 0.61
RMDN1-205ENST00000517821 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
RMDN1-205ENST00000517821 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
RMDN1-205ENST00000517821 ADRA2BP18089 450 aa18.23■□□□□ 0.51
RMDN1-205ENST00000517821 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
RMDN1-205ENST00000517821 MSH5O43196 834 aa17.88■□□□□ 0.45
RMDN1-205ENST00000517821 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
RMDN1-205ENST00000517821 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
RMDN1-205ENST00000517821 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
RMDN1-205ENST00000517821 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
RMDN1-205ENST00000517821 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
RMDN1-205ENST00000517821 NCBP3Q53F19 620 aaKnown RBP16.05■□□□□ 0.16
RMDN1-205ENST00000517821 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
RMDN1-205ENST00000517821 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
RMDN1-205ENST00000517821 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
RMDN1-205ENST00000517821 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
RMDN1-205ENST00000517821 KCNA4P22459 653 aa15.8■□□□□ 0.12
RMDN1-205ENST00000517821 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
RMDN1-205ENST00000517821 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
RMDN1-205ENST00000517821 RNF39Q9H2S5 420 aa15.28■□□□□ 0.04
RMDN1-205ENST00000517821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
RMDN1-205ENST00000517821 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
RMDN1-205ENST00000517821 SLC4A2P04920 1241 aa15□□□□□ -0.01
RMDN1-205ENST00000517821 SLC4A1APQ9BWU0 796 aaKnown RBP14.99□□□□□ -0.01
RMDN1-205ENST00000517821 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
RMDN1-205ENST00000517821 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
RMDN1-205ENST00000517821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
RMDN1-205ENST00000517821 HNRNPUL2Q1KMD3 747 aaKnown RBP14.64□□□□□ -0.07
RMDN1-205ENST00000517821 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
RMDN1-205ENST00000517821 CAPN15O75808 1086 aa14.63□□□□□ -0.07
RMDN1-205ENST00000517821 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
RMDN1-205ENST00000517821 APLP2Q06481 763 aa14.58□□□□□ -0.08
RMDN1-205ENST00000517821 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
RMDN1-205ENST00000517821 ZBTB22O15209 634 aa14.52□□□□□ -0.09
RMDN1-205ENST00000517821 TRHP20396 242 aaPredicted RBP14.48□□□□□ -0.09
RMDN1-205ENST00000517821 DSG3P32926 999 aa14.43□□□□□ -0.1
RMDN1-205ENST00000517821 ZNF219Q9P2Y4 722 aaPredicted RBP14.43□□□□□ -0.1
RMDN1-205ENST00000517821 ABCB7O75027 752 aa14.32□□□□□ -0.12
RMDN1-205ENST00000517821 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
RMDN1-205ENST00000517821 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
RMDN1-205ENST00000517821 CSRNP3Q8WYN3 585 aa14.16□□□□□ -0.14
RMDN1-205ENST00000517821 POLA2Q14181 598 aa14.15□□□□□ -0.14
RMDN1-205ENST00000517821 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
RMDN1-205ENST00000517821 POTEHQ6S545 545 aa14.12□□□□□ -0.15
RMDN1-205ENST00000517821 ZBTB12Q9Y330 459 aaPredicted RBP13.87□□□□□ -0.19
RMDN1-205ENST00000517821 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
RMDN1-205ENST00000517821 FBLN2P98095 1184 aa13.69□□□□□ -0.22
RMDN1-205ENST00000517821 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
RMDN1-205ENST00000517821 MKRN4PQ13434 485 aaPredicted RBP13.61□□□□□ -0.23
RMDN1-205ENST00000517821 AKT1S1Q96B36 256 aa13.52□□□□□ -0.25
RMDN1-205ENST00000517821 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
RMDN1-205ENST00000517821 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
RMDN1-205ENST00000517821 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
RMDN1-205ENST00000517821 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
RMDN1-205ENST00000517821 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
RMDN1-205ENST00000517821 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
RMDN1-205ENST00000517821 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
RMDN1-205ENST00000517821 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
RMDN1-205ENST00000517821 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
RMDN1-205ENST00000517821 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
RMDN1-205ENST00000517821 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
RMDN1-205ENST00000517821 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
RMDN1-205ENST00000517821 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
RMDN1-205ENST00000517821 FXR2P51116 673 aaKnown RBP eCLIP13.05□□□□□ -0.32
RMDN1-205ENST00000517821 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
RMDN1-205ENST00000517821 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
RMDN1-205ENST00000517821 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
RMDN1-205ENST00000517821 CHADLQ6NUI6 762 aa12.86□□□□□ -0.35
RMDN1-205ENST00000517821 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
RMDN1-205ENST00000517821 FKBP8Q14318 412 aa12.84□□□□□ -0.35
RMDN1-205ENST00000517821 PROM2Q8N271 834 aa12.84□□□□□ -0.35
RMDN1-205ENST00000517821 HAX1O00165 279 aa12.79□□□□□ -0.36
RMDN1-205ENST00000517821 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
RMDN1-205ENST00000517821 FARP1Q9Y4F1 1045 aaPredicted RBP12.69□□□□□ -0.38
RMDN1-205ENST00000517821 EVX2Q03828 476 aa12.64□□□□□ -0.39
RMDN1-205ENST00000517821 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
RMDN1-205ENST00000517821 CD44P16070 742 aaKnown RBP12.53□□□□□ -0.4
RMDN1-205ENST00000517821 MIER1Q8N108 512 aa12.53□□□□□ -0.4
RMDN1-205ENST00000517821 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
RMDN1-205ENST00000517821 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
RMDN1-205ENST00000517821 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
RMDN1-205ENST00000517821 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
RMDN1-205ENST00000517821 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
RMDN1-205ENST00000517821 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
RMDN1-205ENST00000517821 PAK3O75914 559 aaPredicted RBP12.39□□□□□ -0.43
RMDN1-205ENST00000517821 GABBR2O75899 941 aa12.37□□□□□ -0.43
RMDN1-205ENST00000517821 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
RMDN1-205ENST00000517821 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
RMDN1-205ENST00000517821 VASPP50552 380 aaPredicted RBP12.31□□□□□ -0.44
RMDN1-205ENST00000517821 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
RMDN1-205ENST00000517821 CLCN6P51797 869 aa12.27□□□□□ -0.45
RMDN1-205ENST00000517821 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
RMDN1-205ENST00000517821 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
RMDN1-205ENST00000517821 NUBP1P53384 320 aa12.21□□□□□ -0.45
RMDN1-205ENST00000517821 KLHL34Q8N239 644 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms