RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-204ENST00000517801 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
FAM49B-204ENST00000517801 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
FAM49B-204ENST00000517801 PHF23Q9BUL5 403 aaPredicted RBP22.28■■□□□ 1.16
FAM49B-204ENST00000517801 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
FAM49B-204ENST00000517801 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
FAM49B-204ENST00000517801 FOXD1Q16676 465 aa20.19■□□□□ 0.82
FAM49B-204ENST00000517801 ADRA2BP18089 450 aa19.58■□□□□ 0.72
FAM49B-204ENST00000517801 PPP6R1Q9UPN7 881 aa19.58■□□□□ 0.72
FAM49B-204ENST00000517801 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
FAM49B-204ENST00000517801 MSH5O43196 834 aa18.56■□□□□ 0.56
FAM49B-204ENST00000517801 PPP4R3CPQ6ZMV5 832 aa18.24■□□□□ 0.51
FAM49B-204ENST00000517801 KCNA4P22459 653 aa18.03■□□□□ 0.48
FAM49B-204ENST00000517801 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
FAM49B-204ENST00000517801 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
FAM49B-204ENST00000517801 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
FAM49B-204ENST00000517801 CNKSR2Q8WXI2 1034 aa17.68■□□□□ 0.42
FAM49B-204ENST00000517801 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
FAM49B-204ENST00000517801 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
FAM49B-204ENST00000517801 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
FAM49B-204ENST00000517801 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
FAM49B-204ENST00000517801 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
FAM49B-204ENST00000517801 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
FAM49B-204ENST00000517801 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
FAM49B-204ENST00000517801 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
FAM49B-204ENST00000517801 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
FAM49B-204ENST00000517801 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
FAM49B-204ENST00000517801 ZBTB22O15209 634 aa16.58■□□□□ 0.24
FAM49B-204ENST00000517801 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
FAM49B-204ENST00000517801 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
FAM49B-204ENST00000517801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.36■□□□□ 0.21
FAM49B-204ENST00000517801 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
FAM49B-204ENST00000517801 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
FAM49B-204ENST00000517801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
FAM49B-204ENST00000517801 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
FAM49B-204ENST00000517801 ATXN8OSP0DMR3 200 aa15.96■□□□□ 0.15
FAM49B-204ENST00000517801 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
FAM49B-204ENST00000517801 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
FAM49B-204ENST00000517801 APLP2Q06481 763 aa15.79■□□□□ 0.12
FAM49B-204ENST00000517801 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
FAM49B-204ENST00000517801 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
FAM49B-204ENST00000517801 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
FAM49B-204ENST00000517801 CAPN15O75808 1086 aa15.53■□□□□ 0.08
FAM49B-204ENST00000517801 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.08
FAM49B-204ENST00000517801 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
FAM49B-204ENST00000517801 CACNB1Q02641 598 aaPredicted RBP15.36■□□□□ 0.05
FAM49B-204ENST00000517801 POLA2Q14181 598 aa15.29■□□□□ 0.04
FAM49B-204ENST00000517801 ABCB7O75027 752 aa15.25■□□□□ 0.03
FAM49B-204ENST00000517801 DSG3P32926 999 aa15.21■□□□□ 0.03
FAM49B-204ENST00000517801 FBLN2P98095 1184 aa15.11■□□□□ 0.01
FAM49B-204ENST00000517801 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
FAM49B-204ENST00000517801 MKRN4PQ13434 485 aaPredicted RBP15.08■□□□□ 0
FAM49B-204ENST00000517801 FKBP8Q14318 412 aa15.07■□□□□ 0
FAM49B-204ENST00000517801 SPDYE4A6NLX3 237 aa14.86□□□□□ -0.03
FAM49B-204ENST00000517801 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
FAM49B-204ENST00000517801 SPDYE2BA6NHP3 402 aa14.69□□□□□ -0.06
FAM49B-204ENST00000517801 SPDYE6P0CI01 402 aa14.69□□□□□ -0.06
FAM49B-204ENST00000517801 SPDYE2Q495Y8 402 aa14.69□□□□□ -0.06
FAM49B-204ENST00000517801 ZNF692Q9BU19 519 aaPredicted RBP14.65□□□□□ -0.06
FAM49B-204ENST00000517801 PROM2Q8N271 834 aa14.64□□□□□ -0.07
FAM49B-204ENST00000517801 SSUH2Q9Y2M2 353 aa14.59□□□□□ -0.07
FAM49B-204ENST00000517801 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
FAM49B-204ENST00000517801 FBXO3Q9UK99 471 aa14.5□□□□□ -0.09
FAM49B-204ENST00000517801 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
FAM49B-204ENST00000517801 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
FAM49B-204ENST00000517801 STAG3Q9UJ98 1225 aa14.29□□□□□ -0.12
FAM49B-204ENST00000517801 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
FAM49B-204ENST00000517801 REM2Q8IYK8 340 aaPredicted RBP14.22□□□□□ -0.13
FAM49B-204ENST00000517801 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
FAM49B-204ENST00000517801 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
FAM49B-204ENST00000517801 CLEC11AQ9Y240 323 aa14.13□□□□□ -0.15
FAM49B-204ENST00000517801 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
FAM49B-204ENST00000517801 IFNLR1Q8IU57 520 aaPredicted RBP14.08□□□□□ -0.16
FAM49B-204ENST00000517801 PITPNM1O00562 1244 aa14.06□□□□□ -0.16
FAM49B-204ENST00000517801 MIER1Q8N108 512 aa14.06□□□□□ -0.16
FAM49B-204ENST00000517801 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
FAM49B-204ENST00000517801 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
FAM49B-204ENST00000517801 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
FAM49B-204ENST00000517801 KLHL34Q8N239 644 aa14□□□□□ -0.17
FAM49B-204ENST00000517801 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
FAM49B-204ENST00000517801 SPOCK2Q92563 424 aa13.91□□□□□ -0.18
FAM49B-204ENST00000517801 CREBZFQ9NS37 354 aa13.89□□□□□ -0.19
FAM49B-204ENST00000517801 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
FAM49B-204ENST00000517801 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
FAM49B-204ENST00000517801 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
FAM49B-204ENST00000517801 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
FAM49B-204ENST00000517801 PRKAR2AP13861 404 aaKnown RBP13.72□□□□□ -0.21
FAM49B-204ENST00000517801 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
FAM49B-204ENST00000517801 PKD2Q13563 968 aa13.69□□□□□ -0.22
FAM49B-204ENST00000517801 NUBP1P53384 320 aa13.68□□□□□ -0.22
FAM49B-204ENST00000517801 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
FAM49B-204ENST00000517801 CIZ1Q9ULV3 898 aaPredicted RBP13.65□□□□□ -0.22
FAM49B-204ENST00000517801 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
FAM49B-204ENST00000517801 GSE1Q14687 1217 aa13.61□□□□□ -0.23
FAM49B-204ENST00000517801 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
FAM49B-204ENST00000517801 FAM212AQ96EL1 285 aa13.59□□□□□ -0.23
FAM49B-204ENST00000517801 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
FAM49B-204ENST00000517801 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
FAM49B-204ENST00000517801 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
FAM49B-204ENST00000517801 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
FAM49B-204ENST00000517801 TSPYL2Q9H2G4 693 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms