RNA–Protein interactions for RNA: ENST00000517710.5

RMDN1-204, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 3

Gene RMDN1, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-204ENST00000517710 AEBP2Q6ZN18 517 aaPredicted RBP28.12■■■□□ 2.09
RMDN1-204ENST00000517710 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
RMDN1-204ENST00000517710 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.45
RMDN1-204ENST00000517710 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
RMDN1-204ENST00000517710 FOXD1Q16676 465 aa22.38■■□□□ 1.17
RMDN1-204ENST00000517710 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
RMDN1-204ENST00000517710 MSH5O43196 834 aa21.04■□□□□ 0.96
RMDN1-204ENST00000517710 PIAS4Q8N2W9 510 aaPredicted RBP20.92■□□□□ 0.94
RMDN1-204ENST00000517710 PPP6R1Q9UPN7 881 aa20.89■□□□□ 0.93
RMDN1-204ENST00000517710 ADRA2BP18089 450 aa20.8■□□□□ 0.92
RMDN1-204ENST00000517710 POTEDQ86YR6 584 aa20.5■□□□□ 0.87
RMDN1-204ENST00000517710 SCAF1Q9H7N4 1312 aaKnown RBP19.15■□□□□ 0.66
RMDN1-204ENST00000517710 MAPK8IP2Q13387 824 aaPredicted RBP19.12■□□□□ 0.65
RMDN1-204ENST00000517710 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.64
RMDN1-204ENST00000517710 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
RMDN1-204ENST00000517710 KCNA4P22459 653 aa18.58■□□□□ 0.56
RMDN1-204ENST00000517710 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.56
RMDN1-204ENST00000517710 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
RMDN1-204ENST00000517710 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
RMDN1-204ENST00000517710 NPM3O75607 178 aaKnown RBP18.24■□□□□ 0.51
RMDN1-204ENST00000517710 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
RMDN1-204ENST00000517710 DCAF8L1A6NGE4 600 aa18.23■□□□□ 0.51
RMDN1-204ENST00000517710 CACNB1Q02641 598 aaPredicted RBP18.01■□□□□ 0.47
RMDN1-204ENST00000517710 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
RMDN1-204ENST00000517710 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
RMDN1-204ENST00000517710 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
RMDN1-204ENST00000517710 C1QBPQ07021 282 aaKnown RBP17.7■□□□□ 0.42
RMDN1-204ENST00000517710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.48■□□□□ 0.39
RMDN1-204ENST00000517710 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
RMDN1-204ENST00000517710 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
RMDN1-204ENST00000517710 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
RMDN1-204ENST00000517710 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
RMDN1-204ENST00000517710 ZBTB22O15209 634 aa17.08■□□□□ 0.32
RMDN1-204ENST00000517710 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
RMDN1-204ENST00000517710 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
RMDN1-204ENST00000517710 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
RMDN1-204ENST00000517710 CAPN15O75808 1086 aa16.82■□□□□ 0.28
RMDN1-204ENST00000517710 DSG3P32926 999 aa16.75■□□□□ 0.27
RMDN1-204ENST00000517710 APLP2Q06481 763 aa16.73■□□□□ 0.27
RMDN1-204ENST00000517710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
RMDN1-204ENST00000517710 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
RMDN1-204ENST00000517710 SAMD1Q6SPF0 538 aaPredicted RBP16.64■□□□□ 0.25
RMDN1-204ENST00000517710 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
RMDN1-204ENST00000517710 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
RMDN1-204ENST00000517710 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
RMDN1-204ENST00000517710 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
RMDN1-204ENST00000517710 ABCB7O75027 752 aa16.39■□□□□ 0.21
RMDN1-204ENST00000517710 POLA2Q14181 598 aa16.09■□□□□ 0.17
RMDN1-204ENST00000517710 POTEHQ6S545 545 aa16.08■□□□□ 0.16
RMDN1-204ENST00000517710 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
RMDN1-204ENST00000517710 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
RMDN1-204ENST00000517710 FBLN2P98095 1184 aa15.73■□□□□ 0.11
RMDN1-204ENST00000517710 MKRN4PQ13434 485 aaPredicted RBP15.68■□□□□ 0.1
RMDN1-204ENST00000517710 CHRDL2Q6WN34 429 aa15.66■□□□□ 0.1
RMDN1-204ENST00000517710 AKT1S1Q96B36 256 aa15.66■□□□□ 0.1
RMDN1-204ENST00000517710 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
RMDN1-204ENST00000517710 REM2Q8IYK8 340 aaPredicted RBP15.46■□□□□ 0.07
RMDN1-204ENST00000517710 FKBP8Q14318 412 aa15.4■□□□□ 0.06
RMDN1-204ENST00000517710 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
RMDN1-204ENST00000517710 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
RMDN1-204ENST00000517710 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
RMDN1-204ENST00000517710 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
RMDN1-204ENST00000517710 ZNF692Q9BU19 519 aaPredicted RBP15.3■□□□□ 0.04
RMDN1-204ENST00000517710 PITPNM1O00562 1244 aa15.28■□□□□ 0.04
RMDN1-204ENST00000517710 PIP4P2Q8N4L2 257 aa15.26■□□□□ 0.03
RMDN1-204ENST00000517710 SSUH2Q9Y2M2 353 aa15.21■□□□□ 0.03
RMDN1-204ENST00000517710 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
RMDN1-204ENST00000517710 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
RMDN1-204ENST00000517710 SPDYE1Q8NFV5 336 aaPredicted RBP15.08■□□□□ 0
RMDN1-204ENST00000517710 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
RMDN1-204ENST00000517710 PROM2Q8N271 834 aa15.06■□□□□ 0
RMDN1-204ENST00000517710 HAX1O00165 279 aa14.98□□□□□ -0.01
RMDN1-204ENST00000517710 CLEC11AQ9Y240 323 aa14.98□□□□□ -0.01
RMDN1-204ENST00000517710 PRKAR2AP13861 404 aaKnown RBP14.89□□□□□ -0.03
RMDN1-204ENST00000517710 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
RMDN1-204ENST00000517710 FBXO3Q9UK99 471 aa14.83□□□□□ -0.04
RMDN1-204ENST00000517710 EVX2Q03828 476 aa14.78□□□□□ -0.04
RMDN1-204ENST00000517710 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
RMDN1-204ENST00000517710 C19orf67A6NJJ6 358 aa14.7□□□□□ -0.06
RMDN1-204ENST00000517710 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
RMDN1-204ENST00000517710 VASPP50552 380 aaPredicted RBP14.63□□□□□ -0.07
RMDN1-204ENST00000517710 MIER1Q8N108 512 aa14.58□□□□□ -0.08
RMDN1-204ENST00000517710 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
RMDN1-204ENST00000517710 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
RMDN1-204ENST00000517710 PLEKHG5O94827 1062 aa14.51□□□□□ -0.09
RMDN1-204ENST00000517710 CREBZFQ9NS37 354 aa14.5□□□□□ -0.09
RMDN1-204ENST00000517710 GABBR2O75899 941 aa14.47□□□□□ -0.09
RMDN1-204ENST00000517710 CD44P16070 742 aaKnown RBP14.43□□□□□ -0.1
RMDN1-204ENST00000517710 IFNLR1Q8IU57 520 aaPredicted RBP14.43□□□□□ -0.1
RMDN1-204ENST00000517710 KLHL34Q8N239 644 aa14.41□□□□□ -0.1
RMDN1-204ENST00000517710 ZBTB47Q9UFB7 747 aaPredicted RBP14.38□□□□□ -0.11
RMDN1-204ENST00000517710 CLCN6P51797 869 aa14.37□□□□□ -0.11
RMDN1-204ENST00000517710 MNX1P50219 401 aaPredicted RBP14.34□□□□□ -0.11
RMDN1-204ENST00000517710 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
RMDN1-204ENST00000517710 SPOCK2Q92563 424 aa14.26□□□□□ -0.13
RMDN1-204ENST00000517710 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
RMDN1-204ENST00000517710 ZRANB1Q9UGI0 708 aa14.21□□□□□ -0.13
RMDN1-204ENST00000517710 NUBP1P53384 320 aa14.17□□□□□ -0.14
RMDN1-204ENST00000517710 PAK3O75914 559 aaPredicted RBP14.15□□□□□ -0.14
RMDN1-204ENST00000517710 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms