RNA–Protein interactions for RNA: ENST00000517684.2

RNF139-202, Transcript of ring finger protein 139, humanhuman

TSL 3

Gene RNF139, Length 467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-202ENST00000517684 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
RNF139-202ENST00000517684 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
RNF139-202ENST00000517684 SENP3Q9H4L4 574 aaPredicted RBP21.33■■□□□ 1.01
RNF139-202ENST00000517684 PHF23Q9BUL5 403 aaPredicted RBP21.3■■□□□ 1
RNF139-202ENST00000517684 FOXD1Q16676 465 aa19.82■□□□□ 0.76
RNF139-202ENST00000517684 PLPPR3Q6T4P5 718 aa19.61■□□□□ 0.73
RNF139-202ENST00000517684 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
RNF139-202ENST00000517684 ADRA2BP18089 450 aa18.88■□□□□ 0.61
RNF139-202ENST00000517684 PIAS4Q8N2W9 510 aaPredicted RBP18.65■□□□□ 0.58
RNF139-202ENST00000517684 MSH5O43196 834 aa18.42■□□□□ 0.54
RNF139-202ENST00000517684 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
RNF139-202ENST00000517684 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
RNF139-202ENST00000517684 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
RNF139-202ENST00000517684 MAPK8IP2Q13387 824 aaPredicted RBP17.2■□□□□ 0.34
RNF139-202ENST00000517684 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
RNF139-202ENST00000517684 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
RNF139-202ENST00000517684 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
RNF139-202ENST00000517684 KCNA4P22459 653 aa16.58■□□□□ 0.24
RNF139-202ENST00000517684 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
RNF139-202ENST00000517684 HOXD11P31277 338 aaPredicted RBP16.52■□□□□ 0.24
RNF139-202ENST00000517684 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
RNF139-202ENST00000517684 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
RNF139-202ENST00000517684 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
RNF139-202ENST00000517684 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
RNF139-202ENST00000517684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
RNF139-202ENST00000517684 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
RNF139-202ENST00000517684 RNF39Q9H2S5 420 aa15.75■□□□□ 0.11
RNF139-202ENST00000517684 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
RNF139-202ENST00000517684 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
RNF139-202ENST00000517684 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
RNF139-202ENST00000517684 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
RNF139-202ENST00000517684 ZBTB22O15209 634 aa15.23■□□□□ 0.03
RNF139-202ENST00000517684 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
RNF139-202ENST00000517684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.22■□□□□ 0.03
RNF139-202ENST00000517684 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
RNF139-202ENST00000517684 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
RNF139-202ENST00000517684 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
RNF139-202ENST00000517684 APLP2Q06481 763 aa15.12■□□□□ 0.01
RNF139-202ENST00000517684 CAPN15O75808 1086 aa15.11■□□□□ 0.01
RNF139-202ENST00000517684 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
RNF139-202ENST00000517684 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
RNF139-202ENST00000517684 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
RNF139-202ENST00000517684 ZNF219Q9P2Y4 722 aaPredicted RBP14.95□□□□□ -0.02
RNF139-202ENST00000517684 DSG3P32926 999 aa14.88□□□□□ -0.03
RNF139-202ENST00000517684 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
RNF139-202ENST00000517684 ABCB7O75027 752 aa14.8□□□□□ -0.04
RNF139-202ENST00000517684 ATXN8OSP0DMR3 200 aa14.8□□□□□ -0.04
RNF139-202ENST00000517684 POLA2Q14181 598 aa14.68□□□□□ -0.06
RNF139-202ENST00000517684 ZBTB12Q9Y330 459 aaPredicted RBP14.4□□□□□ -0.1
RNF139-202ENST00000517684 FBLN2P98095 1184 aa14.26□□□□□ -0.13
RNF139-202ENST00000517684 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
RNF139-202ENST00000517684 POTEHQ6S545 545 aa14.18□□□□□ -0.14
RNF139-202ENST00000517684 MKRN4PQ13434 485 aaPredicted RBP14.17□□□□□ -0.14
RNF139-202ENST00000517684 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
RNF139-202ENST00000517684 SPDYE2BA6NHP3 402 aa13.99□□□□□ -0.17
RNF139-202ENST00000517684 SPDYE6P0CI01 402 aa13.99□□□□□ -0.17
RNF139-202ENST00000517684 SPDYE2Q495Y8 402 aa13.99□□□□□ -0.17
RNF139-202ENST00000517684 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
RNF139-202ENST00000517684 ZNF692Q9BU19 519 aaPredicted RBP13.93□□□□□ -0.18
RNF139-202ENST00000517684 REM2Q8IYK8 340 aaPredicted RBP13.84□□□□□ -0.19
RNF139-202ENST00000517684 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
RNF139-202ENST00000517684 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
RNF139-202ENST00000517684 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
RNF139-202ENST00000517684 PABPN1Q86U42 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
RNF139-202ENST00000517684 PITPNM1O00562 1244 aa13.67□□□□□ -0.22
RNF139-202ENST00000517684 SPDYE1Q8NFV5 336 aaPredicted RBP13.64□□□□□ -0.23
RNF139-202ENST00000517684 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
RNF139-202ENST00000517684 FKBP8Q14318 412 aa13.56□□□□□ -0.24
RNF139-202ENST00000517684 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
RNF139-202ENST00000517684 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
RNF139-202ENST00000517684 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
RNF139-202ENST00000517684 PROM2Q8N271 834 aa13.45□□□□□ -0.26
RNF139-202ENST00000517684 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
RNF139-202ENST00000517684 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
RNF139-202ENST00000517684 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
RNF139-202ENST00000517684 SP7Q8TDD2 431 aaPredicted RBP13.27□□□□□ -0.29
RNF139-202ENST00000517684 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
RNF139-202ENST00000517684 HAX1O00165 279 aa13.18□□□□□ -0.3
RNF139-202ENST00000517684 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
RNF139-202ENST00000517684 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
RNF139-202ENST00000517684 MIER1Q8N108 512 aa13.12□□□□□ -0.31
RNF139-202ENST00000517684 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
RNF139-202ENST00000517684 EVX2Q03828 476 aa13.07□□□□□ -0.32
RNF139-202ENST00000517684 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
RNF139-202ENST00000517684 MNX1P50219 401 aaPredicted RBP13.02□□□□□ -0.33
RNF139-202ENST00000517684 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
RNF139-202ENST00000517684 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
RNF139-202ENST00000517684 VASPP50552 380 aaPredicted RBP12.96□□□□□ -0.33
RNF139-202ENST00000517684 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
RNF139-202ENST00000517684 ZBTB47Q9UFB7 747 aaPredicted RBP12.92□□□□□ -0.34
RNF139-202ENST00000517684 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
RNF139-202ENST00000517684 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
RNF139-202ENST00000517684 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
RNF139-202ENST00000517684 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
RNF139-202ENST00000517684 IFNLR1Q8IU57 520 aaPredicted RBP12.77□□□□□ -0.37
RNF139-202ENST00000517684 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
RNF139-202ENST00000517684 NUBP1P53384 320 aa12.76□□□□□ -0.37
RNF139-202ENST00000517684 GABBR2O75899 941 aa12.74□□□□□ -0.37
RNF139-202ENST00000517684 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
RNF139-202ENST00000517684 PHF12Q96QT6 1004 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms