RNA–Protein interactions for RNA: ENST00000517594.1

MSRA-204, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 4

Gene MSRA, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-204ENST00000517594 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
MSRA-204ENST00000517594 CHIC1Q5VXU3 224 aa26.76■■□□□ 1.87
MSRA-204ENST00000517594 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
MSRA-204ENST00000517594 PHF23Q9BUL5 403 aaPredicted RBP23.68■■□□□ 1.38
MSRA-204ENST00000517594 FOXD1Q16676 465 aa22.38■■□□□ 1.17
MSRA-204ENST00000517594 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
MSRA-204ENST00000517594 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
MSRA-204ENST00000517594 ADRA2BP18089 450 aa20.91■□□□□ 0.94
MSRA-204ENST00000517594 PIAS4Q8N2W9 510 aaPredicted RBP20.87■□□□□ 0.93
MSRA-204ENST00000517594 MSH5O43196 834 aa20.82■□□□□ 0.92
MSRA-204ENST00000517594 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
MSRA-204ENST00000517594 MAPK8IP2Q13387 824 aaPredicted RBP19.22■□□□□ 0.67
MSRA-204ENST00000517594 DMRT2Q9Y5R5 561 aa19.02■□□□□ 0.64
MSRA-204ENST00000517594 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
MSRA-204ENST00000517594 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
MSRA-204ENST00000517594 CNKSR2Q8WXI2 1034 aa18.36■□□□□ 0.53
MSRA-204ENST00000517594 HOXD11P31277 338 aaPredicted RBP18.34■□□□□ 0.53
MSRA-204ENST00000517594 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
MSRA-204ENST00000517594 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
MSRA-204ENST00000517594 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
MSRA-204ENST00000517594 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
MSRA-204ENST00000517594 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
MSRA-204ENST00000517594 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
MSRA-204ENST00000517594 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
MSRA-204ENST00000517594 KCNA4P22459 653 aa17.54■□□□□ 0.4
MSRA-204ENST00000517594 C1QBPQ07021 282 aaKnown RBP17.52■□□□□ 0.4
MSRA-204ENST00000517594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
MSRA-204ENST00000517594 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
MSRA-204ENST00000517594 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
MSRA-204ENST00000517594 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
MSRA-204ENST00000517594 CAPN15O75808 1086 aa16.79■□□□□ 0.28
MSRA-204ENST00000517594 DSG3P32926 999 aa16.73■□□□□ 0.27
MSRA-204ENST00000517594 TRHP20396 242 aaPredicted RBP16.55■□□□□ 0.24
MSRA-204ENST00000517594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.53■□□□□ 0.24
MSRA-204ENST00000517594 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
MSRA-204ENST00000517594 SLC4A1APQ9BWU0 796 aaKnown RBP16.51■□□□□ 0.23
MSRA-204ENST00000517594 APLP2Q06481 763 aa16.5■□□□□ 0.23
MSRA-204ENST00000517594 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
MSRA-204ENST00000517594 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
MSRA-204ENST00000517594 ABCB7O75027 752 aa16.46■□□□□ 0.23
MSRA-204ENST00000517594 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
MSRA-204ENST00000517594 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
MSRA-204ENST00000517594 ZBTB22O15209 634 aa16.18■□□□□ 0.18
MSRA-204ENST00000517594 ATF5Q9Y2D1 282 aaPredicted RBP16.16■□□□□ 0.18
MSRA-204ENST00000517594 POLA2Q14181 598 aa16.12■□□□□ 0.17
MSRA-204ENST00000517594 POTEHQ6S545 545 aa15.92■□□□□ 0.14
MSRA-204ENST00000517594 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
MSRA-204ENST00000517594 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
MSRA-204ENST00000517594 ZBTB12Q9Y330 459 aaPredicted RBP15.7■□□□□ 0.1
MSRA-204ENST00000517594 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
MSRA-204ENST00000517594 CHRDL2Q6WN34 429 aa15.56■□□□□ 0.08
MSRA-204ENST00000517594 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
MSRA-204ENST00000517594 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
MSRA-204ENST00000517594 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
MSRA-204ENST00000517594 MKRN4PQ13434 485 aaPredicted RBP15.4■□□□□ 0.06
MSRA-204ENST00000517594 FBLN2P98095 1184 aa15.36■□□□□ 0.05
MSRA-204ENST00000517594 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
MSRA-204ENST00000517594 SPDYE2BA6NHP3 402 aa15.28■□□□□ 0.04
MSRA-204ENST00000517594 SPDYE6P0CI01 402 aa15.28■□□□□ 0.04
MSRA-204ENST00000517594 SPDYE2Q495Y8 402 aa15.28■□□□□ 0.04
MSRA-204ENST00000517594 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
MSRA-204ENST00000517594 PIP4P2Q8N4L2 257 aa15.23■□□□□ 0.03
MSRA-204ENST00000517594 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
MSRA-204ENST00000517594 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
MSRA-204ENST00000517594 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
MSRA-204ENST00000517594 SPDYE1Q8NFV5 336 aaPredicted RBP14.99□□□□□ -0.01
MSRA-204ENST00000517594 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
MSRA-204ENST00000517594 SP7Q8TDD2 431 aaPredicted RBP14.94□□□□□ -0.02
MSRA-204ENST00000517594 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
MSRA-204ENST00000517594 HAX1O00165 279 aa14.89□□□□□ -0.03
MSRA-204ENST00000517594 PRKAR2AP13861 404 aaKnown RBP14.87□□□□□ -0.03
MSRA-204ENST00000517594 EVX2Q03828 476 aa14.83□□□□□ -0.04
MSRA-204ENST00000517594 CHADLQ6NUI6 762 aa14.77□□□□□ -0.05
MSRA-204ENST00000517594 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
MSRA-204ENST00000517594 C19orf67A6NJJ6 358 aa14.65□□□□□ -0.06
MSRA-204ENST00000517594 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
MSRA-204ENST00000517594 FARP1Q9Y4F1 1045 aaPredicted RBP14.5□□□□□ -0.09
MSRA-204ENST00000517594 CREBZFQ9NS37 354 aa14.45□□□□□ -0.1
MSRA-204ENST00000517594 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
MSRA-204ENST00000517594 GABBR2O75899 941 aa14.42□□□□□ -0.1
MSRA-204ENST00000517594 CD44P16070 742 aaKnown RBP14.4□□□□□ -0.1
MSRA-204ENST00000517594 PROM2Q8N271 834 aa14.31□□□□□ -0.12
MSRA-204ENST00000517594 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
MSRA-204ENST00000517594 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
MSRA-204ENST00000517594 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
MSRA-204ENST00000517594 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
MSRA-204ENST00000517594 CLCN6P51797 869 aa14.08□□□□□ -0.16
MSRA-204ENST00000517594 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
MSRA-204ENST00000517594 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
MSRA-204ENST00000517594 GALR2O43603 387 aaPredicted RBP14.05□□□□□ -0.16
MSRA-204ENST00000517594 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
MSRA-204ENST00000517594 LHX8Q68G74 356 aa14.01□□□□□ -0.17
MSRA-204ENST00000517594 DCBLD2Q96PD2 775 aa13.98□□□□□ -0.17
MSRA-204ENST00000517594 FKBP8Q14318 412 aa13.96□□□□□ -0.17
MSRA-204ENST00000517594 MIER1Q8N108 512 aa13.91□□□□□ -0.18
MSRA-204ENST00000517594 TSPYL2Q9H2G4 693 aaPredicted RBP13.9□□□□□ -0.18
MSRA-204ENST00000517594 MS4A3Q96HJ5 214 aa13.86□□□□□ -0.19
MSRA-204ENST00000517594 CCDC61Q9Y6R9 512 aa13.85□□□□□ -0.19
MSRA-204ENST00000517594 RASEFQ8IZ41 740 aa13.82□□□□□ -0.2
MSRA-204ENST00000517594 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms