RNA–Protein interactions for RNA: ENST00000517467.1

CLSPN-205, Transcript of claspin, humanhuman

TSL 3

Gene CLSPN, Length 553 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-205ENST00000517467 AEBP2Q6ZN18 517 aaPredicted RBP28.28■■■□□ 2.12
CLSPN-205ENST00000517467 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
CLSPN-205ENST00000517467 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
CLSPN-205ENST00000517467 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
CLSPN-205ENST00000517467 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
CLSPN-205ENST00000517467 FOXD1Q16676 465 aa22.24■■□□□ 1.15
CLSPN-205ENST00000517467 PPP6R1Q9UPN7 881 aa21.45■■□□□ 1.02
CLSPN-205ENST00000517467 ADRA2BP18089 450 aa21.39■■□□□ 1.01
CLSPN-205ENST00000517467 PIAS4Q8N2W9 510 aaPredicted RBP20.93■□□□□ 0.94
CLSPN-205ENST00000517467 MSH5O43196 834 aa20.47■□□□□ 0.87
CLSPN-205ENST00000517467 PPP4R3CPQ6ZMV5 832 aa19.76■□□□□ 0.75
CLSPN-205ENST00000517467 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
CLSPN-205ENST00000517467 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
CLSPN-205ENST00000517467 KCNA4P22459 653 aa19.33■□□□□ 0.68
CLSPN-205ENST00000517467 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
CLSPN-205ENST00000517467 CNKSR2Q8WXI2 1034 aa19.21■□□□□ 0.67
CLSPN-205ENST00000517467 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
CLSPN-205ENST00000517467 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
CLSPN-205ENST00000517467 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
CLSPN-205ENST00000517467 HOXD11P31277 338 aaPredicted RBP18.78■□□□□ 0.6
CLSPN-205ENST00000517467 POTEDQ86YR6 584 aa18.61■□□□□ 0.57
CLSPN-205ENST00000517467 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.56
CLSPN-205ENST00000517467 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
CLSPN-205ENST00000517467 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
CLSPN-205ENST00000517467 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
CLSPN-205ENST00000517467 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
CLSPN-205ENST00000517467 ZBTB22O15209 634 aa17.82■□□□□ 0.44
CLSPN-205ENST00000517467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLSPN-205ENST00000517467 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
CLSPN-205ENST00000517467 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
CLSPN-205ENST00000517467 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
CLSPN-205ENST00000517467 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
CLSPN-205ENST00000517467 MYCNP04198 464 aaPredicted RBP17.51■□□□□ 0.39
CLSPN-205ENST00000517467 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
CLSPN-205ENST00000517467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
CLSPN-205ENST00000517467 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.36
CLSPN-205ENST00000517467 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
CLSPN-205ENST00000517467 ATXN8OSP0DMR3 200 aa17.19■□□□□ 0.34
CLSPN-205ENST00000517467 APLP2Q06481 763 aa17.12■□□□□ 0.33
CLSPN-205ENST00000517467 ATF5Q9Y2D1 282 aaPredicted RBP17.08■□□□□ 0.32
CLSPN-205ENST00000517467 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
CLSPN-205ENST00000517467 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
CLSPN-205ENST00000517467 CAPN15O75808 1086 aa16.95■□□□□ 0.3
CLSPN-205ENST00000517467 ZNF219Q9P2Y4 722 aaPredicted RBP16.9■□□□□ 0.3
CLSPN-205ENST00000517467 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
CLSPN-205ENST00000517467 DSG3P32926 999 aa16.72■□□□□ 0.27
CLSPN-205ENST00000517467 POLA2Q14181 598 aa16.65■□□□□ 0.26
CLSPN-205ENST00000517467 ABCB7O75027 752 aa16.63■□□□□ 0.25
CLSPN-205ENST00000517467 ZBTB12Q9Y330 459 aaPredicted RBP16.36■□□□□ 0.21
CLSPN-205ENST00000517467 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
CLSPN-205ENST00000517467 FBLN2P98095 1184 aa16.29■□□□□ 0.2
CLSPN-205ENST00000517467 OSCARQ8IYS5 282 aa16.06■□□□□ 0.16
CLSPN-205ENST00000517467 FKBP8Q14318 412 aa15.97■□□□□ 0.15
CLSPN-205ENST00000517467 SPDYE2BA6NHP3 402 aa15.95■□□□□ 0.14
CLSPN-205ENST00000517467 SPDYE6P0CI01 402 aa15.95■□□□□ 0.14
CLSPN-205ENST00000517467 SPDYE2Q495Y8 402 aa15.95■□□□□ 0.14
CLSPN-205ENST00000517467 SPDYE4A6NLX3 237 aa15.94■□□□□ 0.14
CLSPN-205ENST00000517467 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
CLSPN-205ENST00000517467 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
CLSPN-205ENST00000517467 SSUH2Q9Y2M2 353 aa15.85■□□□□ 0.13
CLSPN-205ENST00000517467 PROM2Q8N271 834 aa15.77■□□□□ 0.12
CLSPN-205ENST00000517467 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
CLSPN-205ENST00000517467 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
CLSPN-205ENST00000517467 REM2Q8IYK8 340 aaPredicted RBP15.59■□□□□ 0.09
CLSPN-205ENST00000517467 SPDYE1Q8NFV5 336 aaPredicted RBP15.45■□□□□ 0.06
CLSPN-205ENST00000517467 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
CLSPN-205ENST00000517467 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
CLSPN-205ENST00000517467 FBXO3Q9UK99 471 aa15.4■□□□□ 0.06
CLSPN-205ENST00000517467 CLEC11AQ9Y240 323 aa15.34■□□□□ 0.05
CLSPN-205ENST00000517467 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
CLSPN-205ENST00000517467 CHRDL2Q6WN34 429 aa15.23■□□□□ 0.03
CLSPN-205ENST00000517467 VASPP50552 380 aaPredicted RBP15.2■□□□□ 0.02
CLSPN-205ENST00000517467 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLSPN-205ENST00000517467 MIER1Q8N108 512 aa15.1■□□□□ 0.01
CLSPN-205ENST00000517467 CREBZFQ9NS37 354 aa15.1■□□□□ 0.01
CLSPN-205ENST00000517467 PLCD3Q8N3E9 789 aa15.06■□□□□ 0
CLSPN-205ENST00000517467 PIP4P2Q8N4L2 257 aa15.06■□□□□ 0
CLSPN-205ENST00000517467 IFNLR1Q8IU57 520 aaPredicted RBP15.03■□□□□ -0
CLSPN-205ENST00000517467 CHADLQ6NUI6 762 aa15□□□□□ -0.01
CLSPN-205ENST00000517467 PRKAR2AP13861 404 aaKnown RBP14.99□□□□□ -0.01
CLSPN-205ENST00000517467 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
CLSPN-205ENST00000517467 MNX1P50219 401 aaPredicted RBP14.98□□□□□ -0.01
CLSPN-205ENST00000517467 ZBTB47Q9UFB7 747 aaPredicted RBP14.91□□□□□ -0.02
CLSPN-205ENST00000517467 KLHL34Q8N239 644 aa14.89□□□□□ -0.03
CLSPN-205ENST00000517467 FARP1Q9Y4F1 1045 aaPredicted RBP14.88□□□□□ -0.03
CLSPN-205ENST00000517467 SPOCK2Q92563 424 aa14.81□□□□□ -0.04
CLSPN-205ENST00000517467 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
CLSPN-205ENST00000517467 NUBP1P53384 320 aa14.77□□□□□ -0.05
CLSPN-205ENST00000517467 POTEHQ6S545 545 aa14.73□□□□□ -0.05
CLSPN-205ENST00000517467 RASEFQ8IZ41 740 aa14.68□□□□□ -0.06
CLSPN-205ENST00000517467 C19orf67A6NJJ6 358 aa14.62□□□□□ -0.07
CLSPN-205ENST00000517467 AMER1Q5JTC6 1135 aaPredicted RBP14.6□□□□□ -0.07
CLSPN-205ENST00000517467 FAM212AQ96EL1 285 aa14.58□□□□□ -0.08
CLSPN-205ENST00000517467 GSE1Q14687 1217 aa14.57□□□□□ -0.08
CLSPN-205ENST00000517467 RTN4Q9NQC3 1192 aaKnown RBP14.57□□□□□ -0.08
CLSPN-205ENST00000517467 DCAF8Q5TAQ9 597 aa14.56□□□□□ -0.08
CLSPN-205ENST00000517467 CD44P16070 742 aaKnown RBP14.55□□□□□ -0.08
CLSPN-205ENST00000517467 PKD2Q13563 968 aa14.54□□□□□ -0.08
CLSPN-205ENST00000517467 TSPYL2Q9H2G4 693 aaPredicted RBP14.54□□□□□ -0.08
CLSPN-205ENST00000517467 HAX1O00165 279 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms