RNA–Protein interactions for RNA: ENST00000515793.1

CDKL2-204, Transcript of cyclin dependent kinase like 2, humanhuman

TSL 2

Gene CDKL2, Length 467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2-204ENST00000515793 AEBP2Q6ZN18 517 aaPredicted RBP24.17■■□□□ 1.46
CDKL2-204ENST00000515793 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
CDKL2-204ENST00000515793 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
CDKL2-204ENST00000515793 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
CDKL2-204ENST00000515793 FOXD1Q16676 465 aa19.33■□□□□ 0.68
CDKL2-204ENST00000515793 MSH5O43196 834 aa18.29■□□□□ 0.52
CDKL2-204ENST00000515793 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
CDKL2-204ENST00000515793 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
CDKL2-204ENST00000515793 PIAS4Q8N2W9 510 aaPredicted RBP18.08■□□□□ 0.48
CDKL2-204ENST00000515793 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
CDKL2-204ENST00000515793 ADRA2BP18089 450 aa17.81■□□□□ 0.44
CDKL2-204ENST00000515793 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
CDKL2-204ENST00000515793 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
CDKL2-204ENST00000515793 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
CDKL2-204ENST00000515793 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
CDKL2-204ENST00000515793 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
CDKL2-204ENST00000515793 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
CDKL2-204ENST00000515793 HOXD11P31277 338 aaPredicted RBP15.69■□□□□ 0.1
CDKL2-204ENST00000515793 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
CDKL2-204ENST00000515793 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
CDKL2-204ENST00000515793 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
CDKL2-204ENST00000515793 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
CDKL2-204ENST00000515793 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
CDKL2-204ENST00000515793 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
CDKL2-204ENST00000515793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
CDKL2-204ENST00000515793 NPM3O75607 178 aaKnown RBP14.92□□□□□ -0.02
CDKL2-204ENST00000515793 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
CDKL2-204ENST00000515793 CAPN15O75808 1086 aa14.55□□□□□ -0.08
CDKL2-204ENST00000515793 KCNA4P22459 653 aa14.49□□□□□ -0.09
CDKL2-204ENST00000515793 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
CDKL2-204ENST00000515793 DSG3P32926 999 aa14.44□□□□□ -0.1
CDKL2-204ENST00000515793 APLP2Q06481 763 aa14.34□□□□□ -0.11
CDKL2-204ENST00000515793 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
CDKL2-204ENST00000515793 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
CDKL2-204ENST00000515793 POTEHQ6S545 545 aa14.24□□□□□ -0.13
CDKL2-204ENST00000515793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
CDKL2-204ENST00000515793 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
CDKL2-204ENST00000515793 ZNF219Q9P2Y4 722 aaPredicted RBP14.23□□□□□ -0.13
CDKL2-204ENST00000515793 ABCB7O75027 752 aa14.15□□□□□ -0.14
CDKL2-204ENST00000515793 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
CDKL2-204ENST00000515793 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
CDKL2-204ENST00000515793 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
CDKL2-204ENST00000515793 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
CDKL2-204ENST00000515793 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
CDKL2-204ENST00000515793 POLA2Q14181 598 aa13.77□□□□□ -0.21
CDKL2-204ENST00000515793 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
CDKL2-204ENST00000515793 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
CDKL2-204ENST00000515793 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
CDKL2-204ENST00000515793 ZBTB12Q9Y330 459 aaPredicted RBP13.55□□□□□ -0.24
CDKL2-204ENST00000515793 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
CDKL2-204ENST00000515793 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.25
CDKL2-204ENST00000515793 ZBTB22O15209 634 aa13.34□□□□□ -0.27
CDKL2-204ENST00000515793 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
CDKL2-204ENST00000515793 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
CDKL2-204ENST00000515793 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
CDKL2-204ENST00000515793 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
CDKL2-204ENST00000515793 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
CDKL2-204ENST00000515793 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
CDKL2-204ENST00000515793 HAX1O00165 279 aa13.12□□□□□ -0.31
CDKL2-204ENST00000515793 FBLN2P98095 1184 aa13.12□□□□□ -0.31
CDKL2-204ENST00000515793 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDKL2-204ENST00000515793 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
CDKL2-204ENST00000515793 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
CDKL2-204ENST00000515793 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
CDKL2-204ENST00000515793 CLEC11AQ9Y240 323 aa12.93□□□□□ -0.34
CDKL2-204ENST00000515793 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
CDKL2-204ENST00000515793 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
CDKL2-204ENST00000515793 PRKAR2AP13861 404 aaKnown RBP12.86□□□□□ -0.35
CDKL2-204ENST00000515793 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
CDKL2-204ENST00000515793 EVX2Q03828 476 aa12.8□□□□□ -0.36
CDKL2-204ENST00000515793 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
CDKL2-204ENST00000515793 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
CDKL2-204ENST00000515793 PRR29P0C7W0 189 aa12.67□□□□□ -0.38
CDKL2-204ENST00000515793 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDKL2-204ENST00000515793 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
CDKL2-204ENST00000515793 GABBR2O75899 941 aa12.58□□□□□ -0.4
CDKL2-204ENST00000515793 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
CDKL2-204ENST00000515793 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
CDKL2-204ENST00000515793 LHX8Q68G74 356 aa12.43□□□□□ -0.42
CDKL2-204ENST00000515793 CLCN6P51797 869 aa12.37□□□□□ -0.43
CDKL2-204ENST00000515793 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
CDKL2-204ENST00000515793 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.45
CDKL2-204ENST00000515793 FKBP8Q14318 412 aa12.24□□□□□ -0.45
CDKL2-204ENST00000515793 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
CDKL2-204ENST00000515793 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
CDKL2-204ENST00000515793 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
CDKL2-204ENST00000515793 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
CDKL2-204ENST00000515793 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
CDKL2-204ENST00000515793 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
CDKL2-204ENST00000515793 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDKL2-204ENST00000515793 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
CDKL2-204ENST00000515793 PHF12Q96QT6 1004 aa12□□□□□ -0.49
CDKL2-204ENST00000515793 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
CDKL2-204ENST00000515793 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
CDKL2-204ENST00000515793 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
CDKL2-204ENST00000515793 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
CDKL2-204ENST00000515793 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
CDKL2-204ENST00000515793 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
CDKL2-204ENST00000515793 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
CDKL2-204ENST00000515793 PELP1Q8IZL8 1130 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms