RNA–Protein interactions for RNA: ENST00000515693.1

CCSER1-213, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 5

Gene CCSER1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-213ENST00000515693 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
CCSER1-213ENST00000515693 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
CCSER1-213ENST00000515693 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
CCSER1-213ENST00000515693 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
CCSER1-213ENST00000515693 FOXD1Q16676 465 aa19.29■□□□□ 0.68
CCSER1-213ENST00000515693 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
CCSER1-213ENST00000515693 POTEDQ86YR6 584 aa18■□□□□ 0.47
CCSER1-213ENST00000515693 MSH5O43196 834 aa17.99■□□□□ 0.47
CCSER1-213ENST00000515693 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
CCSER1-213ENST00000515693 PIAS4Q8N2W9 510 aaPredicted RBP17.89■□□□□ 0.45
CCSER1-213ENST00000515693 ADRA2BP18089 450 aa17.82■□□□□ 0.44
CCSER1-213ENST00000515693 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
CCSER1-213ENST00000515693 DMRT2Q9Y5R5 561 aa16.31■□□□□ 0.2
CCSER1-213ENST00000515693 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
CCSER1-213ENST00000515693 PPP4R3CPQ6ZMV5 832 aa15.81■□□□□ 0.12
CCSER1-213ENST00000515693 HOXD11P31277 338 aaPredicted RBP15.65■□□□□ 0.1
CCSER1-213ENST00000515693 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
CCSER1-213ENST00000515693 CACNB1Q02641 598 aaPredicted RBP15.58■□□□□ 0.08
CCSER1-213ENST00000515693 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
CCSER1-213ENST00000515693 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
CCSER1-213ENST00000515693 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
CCSER1-213ENST00000515693 C1QBPQ07021 282 aaKnown RBP15.12■□□□□ 0.01
CCSER1-213ENST00000515693 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
CCSER1-213ENST00000515693 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
CCSER1-213ENST00000515693 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
CCSER1-213ENST00000515693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.03
CCSER1-213ENST00000515693 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
CCSER1-213ENST00000515693 KCNA4P22459 653 aa14.51□□□□□ -0.09
CCSER1-213ENST00000515693 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
CCSER1-213ENST00000515693 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
CCSER1-213ENST00000515693 DSG3P32926 999 aa14.37□□□□□ -0.11
CCSER1-213ENST00000515693 CAPN15O75808 1086 aa14.34□□□□□ -0.11
CCSER1-213ENST00000515693 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
CCSER1-213ENST00000515693 ABCB7O75027 752 aa14.05□□□□□ -0.16
CCSER1-213ENST00000515693 POTEHQ6S545 545 aa14.03□□□□□ -0.16
CCSER1-213ENST00000515693 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
CCSER1-213ENST00000515693 APLP2Q06481 763 aa13.96□□□□□ -0.17
CCSER1-213ENST00000515693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
CCSER1-213ENST00000515693 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
CCSER1-213ENST00000515693 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
CCSER1-213ENST00000515693 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
CCSER1-213ENST00000515693 POLA2Q14181 598 aa13.7□□□□□ -0.22
CCSER1-213ENST00000515693 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
CCSER1-213ENST00000515693 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
CCSER1-213ENST00000515693 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
CCSER1-213ENST00000515693 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
CCSER1-213ENST00000515693 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.25
CCSER1-213ENST00000515693 ZBTB22O15209 634 aa13.4□□□□□ -0.26
CCSER1-213ENST00000515693 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
CCSER1-213ENST00000515693 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
CCSER1-213ENST00000515693 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
CCSER1-213ENST00000515693 REM2Q8IYK8 340 aaPredicted RBP13.23□□□□□ -0.29
CCSER1-213ENST00000515693 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
CCSER1-213ENST00000515693 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
CCSER1-213ENST00000515693 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
CCSER1-213ENST00000515693 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
CCSER1-213ENST00000515693 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCSER1-213ENST00000515693 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
CCSER1-213ENST00000515693 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
CCSER1-213ENST00000515693 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
CCSER1-213ENST00000515693 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
CCSER1-213ENST00000515693 HAX1O00165 279 aa12.89□□□□□ -0.35
CCSER1-213ENST00000515693 FBLN2P98095 1184 aa12.89□□□□□ -0.35
CCSER1-213ENST00000515693 EVX2Q03828 476 aa12.87□□□□□ -0.35
CCSER1-213ENST00000515693 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
CCSER1-213ENST00000515693 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
CCSER1-213ENST00000515693 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
CCSER1-213ENST00000515693 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
CCSER1-213ENST00000515693 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
CCSER1-213ENST00000515693 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
CCSER1-213ENST00000515693 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
CCSER1-213ENST00000515693 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCSER1-213ENST00000515693 CSRNP3Q8WYN3 585 aa12.57□□□□□ -0.4
CCSER1-213ENST00000515693 GABBR2O75899 941 aa12.48□□□□□ -0.41
CCSER1-213ENST00000515693 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
CCSER1-213ENST00000515693 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
CCSER1-213ENST00000515693 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
CCSER1-213ENST00000515693 POTEIP0CG38 1075 aa12.28□□□□□ -0.44
CCSER1-213ENST00000515693 LHX8Q68G74 356 aa12.24□□□□□ -0.45
CCSER1-213ENST00000515693 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
CCSER1-213ENST00000515693 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
CCSER1-213ENST00000515693 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
CCSER1-213ENST00000515693 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
CCSER1-213ENST00000515693 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
CCSER1-213ENST00000515693 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
CCSER1-213ENST00000515693 CLCN6P51797 869 aa12.08□□□□□ -0.48
CCSER1-213ENST00000515693 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
CCSER1-213ENST00000515693 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.49
CCSER1-213ENST00000515693 DCBLD2Q96PD2 775 aa12.01□□□□□ -0.49
CCSER1-213ENST00000515693 PHF12Q96QT6 1004 aa11.95□□□□□ -0.5
CCSER1-213ENST00000515693 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
CCSER1-213ENST00000515693 PROM2Q8N271 834 aa11.89□□□□□ -0.51
CCSER1-213ENST00000515693 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCSER1-213ENST00000515693 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
CCSER1-213ENST00000515693 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
CCSER1-213ENST00000515693 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
CCSER1-213ENST00000515693 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.53
CCSER1-213ENST00000515693 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
CCSER1-213ENST00000515693 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
CCSER1-213ENST00000515693 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms