RNA–Protein interactions for RNA: ENST00000515550.1

N4BP2-204, Transcript of NEDD4 binding protein 2, humanhuman

TSL 3

Gene N4BP2, Length 724 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
N4BP2-204ENST00000515550 AEBP2Q6ZN18 517 aaPredicted RBP32.59■■■□□ 2.81
N4BP2-204ENST00000515550 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
N4BP2-204ENST00000515550 SENP3Q9H4L4 574 aaPredicted RBP28■■■□□ 2.07
N4BP2-204ENST00000515550 PHF23Q9BUL5 403 aaPredicted RBP27.51■■□□□ 1.99
N4BP2-204ENST00000515550 FOXD1Q16676 465 aa26.02■■□□□ 1.76
N4BP2-204ENST00000515550 MSH5O43196 834 aa24.59■■□□□ 1.53
N4BP2-204ENST00000515550 PLPPR3Q6T4P5 718 aa24.52■■□□□ 1.52
N4BP2-204ENST00000515550 POTEDQ86YR6 584 aa24.36■■□□□ 1.49
N4BP2-204ENST00000515550 PIAS4Q8N2W9 510 aaPredicted RBP24.3■■□□□ 1.48
N4BP2-204ENST00000515550 PPP6R1Q9UPN7 881 aa24.05■■□□□ 1.44
N4BP2-204ENST00000515550 ADRA2BP18089 450 aa23.98■■□□□ 1.43
N4BP2-204ENST00000515550 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
N4BP2-204ENST00000515550 DMRT2Q9Y5R5 561 aa22.12■■□□□ 1.13
N4BP2-204ENST00000515550 MAPK8IP2Q13387 824 aaPredicted RBP22.08■■□□□ 1.13
N4BP2-204ENST00000515550 PPP4R3CPQ6ZMV5 832 aa21.4■■□□□ 1.02
N4BP2-204ENST00000515550 DCAF8L1A6NGE4 600 aa21.22■□□□□ 0.99
N4BP2-204ENST00000515550 CACNB1Q02641 598 aaPredicted RBP21.22■□□□□ 0.99
N4BP2-204ENST00000515550 HOXD11P31277 338 aaPredicted RBP21.2■□□□□ 0.98
N4BP2-204ENST00000515550 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
N4BP2-204ENST00000515550 RNF216Q9NWF9 866 aaPredicted RBP20.99■□□□□ 0.95
N4BP2-204ENST00000515550 RNF39Q9H2S5 420 aa20.89■□□□□ 0.93
N4BP2-204ENST00000515550 C1QBPQ07021 282 aaKnown RBP20.63■□□□□ 0.89
N4BP2-204ENST00000515550 DNAJC5BQ9UF47 199 aa20.61■□□□□ 0.89
N4BP2-204ENST00000515550 NCBP3Q53F19 620 aaKnown RBP20.58■□□□□ 0.89
N4BP2-204ENST00000515550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.83
N4BP2-204ENST00000515550 NPM3O75607 178 aaKnown RBP20.18■□□□□ 0.82
N4BP2-204ENST00000515550 U3KPZ7 1027 aaPredicted RBP19.7■□□□□ 0.74
N4BP2-204ENST00000515550 CAPN15O75808 1086 aa19.52■□□□□ 0.72
N4BP2-204ENST00000515550 KCNA4P22459 653 aa19.5■□□□□ 0.71
N4BP2-204ENST00000515550 SPINK5Q9NQ38 1064 aaPredicted RBP19.47■□□□□ 0.71
N4BP2-204ENST00000515550 DSG3P32926 999 aa19.45■□□□□ 0.7
N4BP2-204ENST00000515550 APLP2Q06481 763 aa19.31■□□□□ 0.68
N4BP2-204ENST00000515550 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
N4BP2-204ENST00000515550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.2■□□□□ 0.66
N4BP2-204ENST00000515550 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
N4BP2-204ENST00000515550 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
N4BP2-204ENST00000515550 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
N4BP2-204ENST00000515550 POTEHQ6S545 545 aa19.07■□□□□ 0.64
N4BP2-204ENST00000515550 SAMD1Q6SPF0 538 aaPredicted RBP19.04■□□□□ 0.64
N4BP2-204ENST00000515550 ABCB7O75027 752 aa18.99■□□□□ 0.63
N4BP2-204ENST00000515550 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
N4BP2-204ENST00000515550 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
N4BP2-204ENST00000515550 POLA2Q14181 598 aa18.54■□□□□ 0.56
N4BP2-204ENST00000515550 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
N4BP2-204ENST00000515550 FOXD4L1Q9NU39 408 aa18.38■□□□□ 0.53
N4BP2-204ENST00000515550 CHRDL2Q6WN34 429 aa18.3■□□□□ 0.52
N4BP2-204ENST00000515550 ZBTB12Q9Y330 459 aaPredicted RBP18.28■□□□□ 0.52
N4BP2-204ENST00000515550 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
N4BP2-204ENST00000515550 AKT1S1Q96B36 256 aa18.14■□□□□ 0.49
N4BP2-204ENST00000515550 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
N4BP2-204ENST00000515550 REM2Q8IYK8 340 aaPredicted RBP17.92■□□□□ 0.46
N4BP2-204ENST00000515550 ZBTB22O15209 634 aa17.89■□□□□ 0.45
N4BP2-204ENST00000515550 ATXN8OSP0DMR3 200 aa17.88■□□□□ 0.45
N4BP2-204ENST00000515550 PIP4P2Q8N4L2 257 aa17.78■□□□□ 0.44
N4BP2-204ENST00000515550 SP7Q8TDD2 431 aaPredicted RBP17.76■□□□□ 0.43
N4BP2-204ENST00000515550 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
N4BP2-204ENST00000515550 FBLN2P98095 1184 aa17.67■□□□□ 0.42
N4BP2-204ENST00000515550 FXR2P51116 673 aaKnown RBP eCLIP17.64■□□□□ 0.413e-6■■□□□ 13.6
N4BP2-204ENST00000515550 SPDYE2BA6NHP3 402 aa17.63■□□□□ 0.41
N4BP2-204ENST00000515550 SPDYE6P0CI01 402 aa17.63■□□□□ 0.41
N4BP2-204ENST00000515550 SPDYE2Q495Y8 402 aa17.63■□□□□ 0.41
N4BP2-204ENST00000515550 HAX1O00165 279 aa17.55■□□□□ 0.4
N4BP2-204ENST00000515550 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
N4BP2-204ENST00000515550 MKRN4PQ13434 485 aaPredicted RBP17.36■□□□□ 0.37
N4BP2-204ENST00000515550 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
N4BP2-204ENST00000515550 CLEC11AQ9Y240 323 aa17.33■□□□□ 0.36
N4BP2-204ENST00000515550 SSUH2Q9Y2M2 353 aa17.32■□□□□ 0.36
N4BP2-204ENST00000515550 PRKAR2AP13861 404 aaKnown RBP17.28■□□□□ 0.36
N4BP2-204ENST00000515550 EVX2Q03828 476 aa17.2■□□□□ 0.34
N4BP2-204ENST00000515550 C19orf67A6NJJ6 358 aa17.09■□□□□ 0.33
N4BP2-204ENST00000515550 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
N4BP2-204ENST00000515550 PRR29P0C7W0 189 aa17.03■□□□□ 0.32
N4BP2-204ENST00000515550 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
N4BP2-204ENST00000515550 GABBR2O75899 941 aa16.89■□□□□ 0.29
N4BP2-204ENST00000515550 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
N4BP2-204ENST00000515550 FARP1Q9Y4F1 1045 aaPredicted RBP16.75■□□□□ 0.27
N4BP2-204ENST00000515550 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
N4BP2-204ENST00000515550 CLCN6P51797 869 aa16.68■□□□□ 0.26
N4BP2-204ENST00000515550 LHX8Q68G74 356 aa16.64■□□□□ 0.25
N4BP2-204ENST00000515550 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
N4BP2-204ENST00000515550 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
N4BP2-204ENST00000515550 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
N4BP2-204ENST00000515550 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
N4BP2-204ENST00000515550 POTEIP0CG38 1075 aa16.47■□□□□ 0.23
N4BP2-204ENST00000515550 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
N4BP2-204ENST00000515550 DCBLD2Q96PD2 775 aa16.44■□□□□ 0.22
N4BP2-204ENST00000515550 ZRANB1Q9UGI0 708 aa16.44■□□□□ 0.22
N4BP2-204ENST00000515550 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
N4BP2-204ENST00000515550 NPM1P06748 294 aaKnown RBP eCLIP16.28■□□□□ 0.2
N4BP2-204ENST00000515550 GALR2O43603 387 aaPredicted RBP16.22■□□□□ 0.19
N4BP2-204ENST00000515550 MNX1P50219 401 aaPredicted RBP16.15■□□□□ 0.18
N4BP2-204ENST00000515550 PHF12Q96QT6 1004 aa16.14■□□□□ 0.17
N4BP2-204ENST00000515550 PROM2Q8N271 834 aa16.03■□□□□ 0.16
N4BP2-204ENST00000515550 OTUD5Q96G74 571 aa15.95■□□□□ 0.14
N4BP2-204ENST00000515550 MS4A3Q96HJ5 214 aa15.94■□□□□ 0.14
N4BP2-204ENST00000515550 ASTLQ6HA08 431 aaPredicted RBP15.92■□□□□ 0.14
N4BP2-204ENST00000515550 POTEB2H3BUK9 544 aa15.91■□□□□ 0.14
N4BP2-204ENST00000515550 PELP1Q8IZL8 1130 aaKnown RBP15.9■□□□□ 0.14
N4BP2-204ENST00000515550 PLEKHG5O94827 1062 aa15.89■□□□□ 0.13
N4BP2-204ENST00000515550 SLC39A7Q92504 469 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms