RNA–Protein interactions for RNA: ENST00000515484.2

GPBP1-209, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-209ENST00000515484 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
GPBP1-209ENST00000515484 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
GPBP1-209ENST00000515484 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
GPBP1-209ENST00000515484 SENP3Q9H4L4 574 aaPredicted RBP22.83■■□□□ 1.25
GPBP1-209ENST00000515484 FOXD1Q16676 465 aa21.3■■□□□ 1
GPBP1-209ENST00000515484 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
GPBP1-209ENST00000515484 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
GPBP1-209ENST00000515484 ADRA2BP18089 450 aa20.18■□□□□ 0.82
GPBP1-209ENST00000515484 PIAS4Q8N2W9 510 aaPredicted RBP19.91■□□□□ 0.78
GPBP1-209ENST00000515484 MSH5O43196 834 aa19.68■□□□□ 0.74
GPBP1-209ENST00000515484 POTEDQ86YR6 584 aa18.54■□□□□ 0.56
GPBP1-209ENST00000515484 MAPK8IP2Q13387 824 aaPredicted RBP18.42■□□□□ 0.54
GPBP1-209ENST00000515484 PPP4R3CPQ6ZMV5 832 aa18.4■□□□□ 0.54
GPBP1-209ENST00000515484 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
GPBP1-209ENST00000515484 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
GPBP1-209ENST00000515484 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
GPBP1-209ENST00000515484 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
GPBP1-209ENST00000515484 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
GPBP1-209ENST00000515484 RNF216Q9NWF9 866 aaPredicted RBP17.7■□□□□ 0.42
GPBP1-209ENST00000515484 KCNA4P22459 653 aa17.66■□□□□ 0.42
GPBP1-209ENST00000515484 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
GPBP1-209ENST00000515484 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
GPBP1-209ENST00000515484 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
GPBP1-209ENST00000515484 RNF39Q9H2S5 420 aa16.92■□□□□ 0.3
GPBP1-209ENST00000515484 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
GPBP1-209ENST00000515484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.27
GPBP1-209ENST00000515484 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
GPBP1-209ENST00000515484 C1QBPQ07021 282 aaKnown RBP16.63■□□□□ 0.25
GPBP1-209ENST00000515484 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
GPBP1-209ENST00000515484 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
GPBP1-209ENST00000515484 ZBTB22O15209 634 aa16.33■□□□□ 0.2
GPBP1-209ENST00000515484 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
GPBP1-209ENST00000515484 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
GPBP1-209ENST00000515484 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
GPBP1-209ENST00000515484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
GPBP1-209ENST00000515484 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
GPBP1-209ENST00000515484 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
GPBP1-209ENST00000515484 CAPN15O75808 1086 aa16.02■□□□□ 0.16
GPBP1-209ENST00000515484 APLP2Q06481 763 aa15.99■□□□□ 0.15
GPBP1-209ENST00000515484 DSG3P32926 999 aa15.97■□□□□ 0.15
GPBP1-209ENST00000515484 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
GPBP1-209ENST00000515484 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
GPBP1-209ENST00000515484 ZNF219Q9P2Y4 722 aaPredicted RBP15.9■□□□□ 0.14
GPBP1-209ENST00000515484 TRHP20396 242 aaPredicted RBP15.88■□□□□ 0.13
GPBP1-209ENST00000515484 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
GPBP1-209ENST00000515484 ATXN8OSP0DMR3 200 aa15.77■□□□□ 0.12
GPBP1-209ENST00000515484 ABCB7O75027 752 aa15.74■□□□□ 0.11
GPBP1-209ENST00000515484 POLA2Q14181 598 aa15.61■□□□□ 0.09
GPBP1-209ENST00000515484 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
GPBP1-209ENST00000515484 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
GPBP1-209ENST00000515484 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
GPBP1-209ENST00000515484 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
GPBP1-209ENST00000515484 FBLN2P98095 1184 aa15.06■□□□□ 0
GPBP1-209ENST00000515484 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
GPBP1-209ENST00000515484 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
GPBP1-209ENST00000515484 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
GPBP1-209ENST00000515484 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
GPBP1-209ENST00000515484 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
GPBP1-209ENST00000515484 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
GPBP1-209ENST00000515484 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
GPBP1-209ENST00000515484 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
GPBP1-209ENST00000515484 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
GPBP1-209ENST00000515484 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
GPBP1-209ENST00000515484 POTEHQ6S545 545 aa14.57□□□□□ -0.08
GPBP1-209ENST00000515484 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
GPBP1-209ENST00000515484 SPDYE1Q8NFV5 336 aaPredicted RBP14.5□□□□□ -0.09
GPBP1-209ENST00000515484 PROM2Q8N271 834 aa14.49□□□□□ -0.09
GPBP1-209ENST00000515484 FXR2P51116 673 aaKnown RBP eCLIP14.46□□□□□ -0.09
GPBP1-209ENST00000515484 PIP4P2Q8N4L2 257 aa14.44□□□□□ -0.1
GPBP1-209ENST00000515484 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
GPBP1-209ENST00000515484 FKBP8Q14318 412 aa14.29□□□□□ -0.12
GPBP1-209ENST00000515484 PRR29P0C7W0 189 aa14.23□□□□□ -0.13
GPBP1-209ENST00000515484 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
GPBP1-209ENST00000515484 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
GPBP1-209ENST00000515484 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
GPBP1-209ENST00000515484 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
GPBP1-209ENST00000515484 MNX1P50219 401 aaPredicted RBP14.01□□□□□ -0.17
GPBP1-209ENST00000515484 FARP1Q9Y4F1 1045 aaPredicted RBP14.01□□□□□ -0.17
GPBP1-209ENST00000515484 EVX2Q03828 476 aa13.99□□□□□ -0.17
GPBP1-209ENST00000515484 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
GPBP1-209ENST00000515484 HAX1O00165 279 aa13.93□□□□□ -0.18
GPBP1-209ENST00000515484 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
GPBP1-209ENST00000515484 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
GPBP1-209ENST00000515484 MIER1Q8N108 512 aa13.78□□□□□ -0.2
GPBP1-209ENST00000515484 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
GPBP1-209ENST00000515484 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
GPBP1-209ENST00000515484 VASPP50552 380 aaPredicted RBP13.72□□□□□ -0.21
GPBP1-209ENST00000515484 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
GPBP1-209ENST00000515484 ZNF579Q8NAF0 562 aaKnown RBP13.67□□□□□ -0.22
GPBP1-209ENST00000515484 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
GPBP1-209ENST00000515484 NUBP1P53384 320 aa13.64□□□□□ -0.23
GPBP1-209ENST00000515484 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
GPBP1-209ENST00000515484 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
GPBP1-209ENST00000515484 GABBR2O75899 941 aa13.62□□□□□ -0.23
GPBP1-209ENST00000515484 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
GPBP1-209ENST00000515484 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
GPBP1-209ENST00000515484 CCDC61Q9Y6R9 512 aa13.56□□□□□ -0.24
GPBP1-209ENST00000515484 PHF12Q96QT6 1004 aa13.54□□□□□ -0.24
GPBP1-209ENST00000515484 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
GPBP1-209ENST00000515484 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms