RNA–Protein interactions for RNA: ENST00000515140.1

CENPC-207, Transcript of centromere protein C, humanhuman

TSL 1 (best)

Gene CENPC, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPC-207ENST00000515140 AEBP2Q6ZN18 517 aaPredicted RBP28.37■■■□□ 2.13
CENPC-207ENST00000515140 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
CENPC-207ENST00000515140 SENP3Q9H4L4 574 aaPredicted RBP24.35■■□□□ 1.49
CENPC-207ENST00000515140 PHF23Q9BUL5 403 aaPredicted RBP23.96■■□□□ 1.43
CENPC-207ENST00000515140 FOXD1Q16676 465 aa22.52■■□□□ 1.2
CENPC-207ENST00000515140 PLPPR3Q6T4P5 718 aa22.05■■□□□ 1.12
CENPC-207ENST00000515140 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
CENPC-207ENST00000515140 ADRA2BP18089 450 aa21.15■□□□□ 0.98
CENPC-207ENST00000515140 PIAS4Q8N2W9 510 aaPredicted RBP21.15■□□□□ 0.98
CENPC-207ENST00000515140 MSH5O43196 834 aa21.13■□□□□ 0.97
CENPC-207ENST00000515140 POTEDQ86YR6 584 aa19.98■□□□□ 0.79
CENPC-207ENST00000515140 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
CENPC-207ENST00000515140 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
CENPC-207ENST00000515140 MAPK8IP2Q13387 824 aaPredicted RBP19.3■□□□□ 0.68
CENPC-207ENST00000515140 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
CENPC-207ENST00000515140 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
CENPC-207ENST00000515140 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
CENPC-207ENST00000515140 HOXD11P31277 338 aaPredicted RBP18.73■□□□□ 0.59
CENPC-207ENST00000515140 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
CENPC-207ENST00000515140 DCAF8L1A6NGE4 600 aa18.4■□□□□ 0.54
CENPC-207ENST00000515140 NPM3O75607 178 aaKnown RBP18.34■□□□□ 0.53
CENPC-207ENST00000515140 KCNA4P22459 653 aa18.19■□□□□ 0.5
CENPC-207ENST00000515140 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
CENPC-207ENST00000515140 RNF39Q9H2S5 420 aa17.98■□□□□ 0.47
CENPC-207ENST00000515140 CACNB1Q02641 598 aaPredicted RBP17.85■□□□□ 0.45
CENPC-207ENST00000515140 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
CENPC-207ENST00000515140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.81■□□□□ 0.444e-9■□□□□ 8.9
CENPC-207ENST00000515140 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
CENPC-207ENST00000515140 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
CENPC-207ENST00000515140 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
CENPC-207ENST00000515140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
CENPC-207ENST00000515140 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
CENPC-207ENST00000515140 APLP2Q06481 763 aa17.22■□□□□ 0.35
CENPC-207ENST00000515140 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
CENPC-207ENST00000515140 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
CENPC-207ENST00000515140 CAPN15O75808 1086 aa17.05■□□□□ 0.32
CENPC-207ENST00000515140 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
CENPC-207ENST00000515140 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
CENPC-207ENST00000515140 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.31
CENPC-207ENST00000515140 DSG3P32926 999 aa16.9■□□□□ 0.3
CENPC-207ENST00000515140 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
CENPC-207ENST00000515140 ZBTB22O15209 634 aa16.68■□□□□ 0.26
CENPC-207ENST00000515140 ABCB7O75027 752 aa16.61■□□□□ 0.25
CENPC-207ENST00000515140 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
CENPC-207ENST00000515140 POLA2Q14181 598 aa16.45■□□□□ 0.22
CENPC-207ENST00000515140 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
CENPC-207ENST00000515140 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
CENPC-207ENST00000515140 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
CENPC-207ENST00000515140 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
CENPC-207ENST00000515140 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
CENPC-207ENST00000515140 FBLN2P98095 1184 aa15.99■□□□□ 0.15
CENPC-207ENST00000515140 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
CENPC-207ENST00000515140 AKT1S1Q96B36 256 aa15.91■□□□□ 0.14
CENPC-207ENST00000515140 SPDYE2BA6NHP3 402 aa15.8■□□□□ 0.12
CENPC-207ENST00000515140 SPDYE6P0CI01 402 aa15.8■□□□□ 0.12
CENPC-207ENST00000515140 SPDYE2Q495Y8 402 aa15.8■□□□□ 0.12
CENPC-207ENST00000515140 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
CENPC-207ENST00000515140 POTEHQ6S545 545 aa15.75■□□□□ 0.11
CENPC-207ENST00000515140 CHRDL2Q6WN34 429 aa15.67■□□□□ 0.1
CENPC-207ENST00000515140 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
CENPC-207ENST00000515140 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
CENPC-207ENST00000515140 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
CENPC-207ENST00000515140 PITPNM1O00562 1244 aa15.48■□□□□ 0.07
CENPC-207ENST00000515140 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
CENPC-207ENST00000515140 FXR2P51116 673 aaKnown RBP eCLIP15.33■□□□□ 0.04
CENPC-207ENST00000515140 PIP4P2Q8N4L2 257 aa15.33■□□□□ 0.04
CENPC-207ENST00000515140 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
CENPC-207ENST00000515140 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
CENPC-207ENST00000515140 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
CENPC-207ENST00000515140 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
CENPC-207ENST00000515140 STAG3Q9UJ98 1225 aa15.12■□□□□ 0.01
CENPC-207ENST00000515140 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
CENPC-207ENST00000515140 HAX1O00165 279 aa14.98□□□□□ -0.01
CENPC-207ENST00000515140 PROM2Q8N271 834 aa14.96□□□□□ -0.01
CENPC-207ENST00000515140 SP7Q8TDD2 431 aaPredicted RBP14.93□□□□□ -0.02
CENPC-207ENST00000515140 CHADLQ6NUI6 762 aa14.89□□□□□ -0.03
CENPC-207ENST00000515140 C19orf67A6NJJ6 358 aa14.83□□□□□ -0.04
CENPC-207ENST00000515140 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
CENPC-207ENST00000515140 CREBZFQ9NS37 354 aa14.77□□□□□ -0.05
CENPC-207ENST00000515140 FKBP8Q14318 412 aa14.71□□□□□ -0.05
CENPC-207ENST00000515140 EVX2Q03828 476 aa14.68□□□□□ -0.06
CENPC-207ENST00000515140 CD44P16070 742 aaKnown RBP14.65□□□□□ -0.06
CENPC-207ENST00000515140 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
CENPC-207ENST00000515140 CLCN6P51797 869 aa14.62□□□□□ -0.07
CENPC-207ENST00000515140 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
CENPC-207ENST00000515140 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
CENPC-207ENST00000515140 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
CENPC-207ENST00000515140 FBXO3Q9UK99 471 aa14.5□□□□□ -0.09
CENPC-207ENST00000515140 GABBR2O75899 941 aa14.49□□□□□ -0.09
CENPC-207ENST00000515140 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
CENPC-207ENST00000515140 MIER1Q8N108 512 aa14.47□□□□□ -0.09
CENPC-207ENST00000515140 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
CENPC-207ENST00000515140 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
CENPC-207ENST00000515140 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
CENPC-207ENST00000515140 PHF12Q96QT6 1004 aa14.23□□□□□ -0.13
CENPC-207ENST00000515140 DCBLD2Q96PD2 775 aa14.22□□□□□ -0.13
CENPC-207ENST00000515140 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
CENPC-207ENST00000515140 VASPP50552 380 aaPredicted RBP14.21□□□□□ -0.13
CENPC-207ENST00000515140 CCDC61Q9Y6R9 512 aa14.21□□□□□ -0.13
CENPC-207ENST00000515140 RASEFQ8IZ41 740 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms