RNA–Protein interactions for RNA: ENST00000515125.5

GFM2-210, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 3

Gene GFM2, Length 1,125 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-210ENST00000515125 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
GFM2-210ENST00000515125 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
GFM2-210ENST00000515125 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
GFM2-210ENST00000515125 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
GFM2-210ENST00000515125 FOXD1Q16676 465 aa18.84■□□□□ 0.61
GFM2-210ENST00000515125 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
GFM2-210ENST00000515125 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
GFM2-210ENST00000515125 ADRA2BP18089 450 aa17.64■□□□□ 0.41
GFM2-210ENST00000515125 PIAS4Q8N2W9 510 aaPredicted RBP17.49■□□□□ 0.39
GFM2-210ENST00000515125 MSH5O43196 834 aa17.39■□□□□ 0.37
GFM2-210ENST00000515125 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
GFM2-210ENST00000515125 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
GFM2-210ENST00000515125 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
GFM2-210ENST00000515125 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
GFM2-210ENST00000515125 PPP4R3CPQ6ZMV5 832 aa15.81■□□□□ 0.12
GFM2-210ENST00000515125 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
GFM2-210ENST00000515125 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
GFM2-210ENST00000515125 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
GFM2-210ENST00000515125 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
GFM2-210ENST00000515125 NPM3O75607 178 aaKnown RBP15.05■□□□□ -0
GFM2-210ENST00000515125 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
GFM2-210ENST00000515125 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
GFM2-210ENST00000515125 CACNB1Q02641 598 aaPredicted RBP14.9□□□□□ -0.02
GFM2-210ENST00000515125 KCNA4P22459 653 aa14.86□□□□□ -0.03
GFM2-210ENST00000515125 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
GFM2-210ENST00000515125 C1QBPQ07021 282 aaKnown RBP14.66□□□□□ -0.06
GFM2-210ENST00000515125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.59□□□□□ -0.07
GFM2-210ENST00000515125 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
GFM2-210ENST00000515125 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
GFM2-210ENST00000515125 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
GFM2-210ENST00000515125 DSG3P32926 999 aa14.07□□□□□ -0.16
GFM2-210ENST00000515125 CAPN15O75808 1086 aa14.04□□□□□ -0.16
GFM2-210ENST00000515125 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
GFM2-210ENST00000515125 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
GFM2-210ENST00000515125 ABCB7O75027 752 aa13.82□□□□□ -0.2
GFM2-210ENST00000515125 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
GFM2-210ENST00000515125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
GFM2-210ENST00000515125 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
GFM2-210ENST00000515125 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
GFM2-210ENST00000515125 ZBTB22O15209 634 aa13.77□□□□□ -0.21
GFM2-210ENST00000515125 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
GFM2-210ENST00000515125 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
GFM2-210ENST00000515125 APLP2Q06481 763 aa13.7□□□□□ -0.22
GFM2-210ENST00000515125 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
GFM2-210ENST00000515125 POLA2Q14181 598 aa13.56□□□□□ -0.24
GFM2-210ENST00000515125 POTEHQ6S545 545 aa13.29□□□□□ -0.28
GFM2-210ENST00000515125 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
GFM2-210ENST00000515125 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
GFM2-210ENST00000515125 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
GFM2-210ENST00000515125 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
GFM2-210ENST00000515125 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
GFM2-210ENST00000515125 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
GFM2-210ENST00000515125 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
GFM2-210ENST00000515125 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
GFM2-210ENST00000515125 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
GFM2-210ENST00000515125 EHMT2Q96KQ7 1210 aa12.9□□□□□ -0.34
GFM2-210ENST00000515125 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
GFM2-210ENST00000515125 FBLN2P98095 1184 aa12.83□□□□□ -0.36
GFM2-210ENST00000515125 SPDYE2BA6NHP3 402 aa12.8□□□□□ -0.36
GFM2-210ENST00000515125 SPDYE6P0CI01 402 aa12.8□□□□□ -0.36
GFM2-210ENST00000515125 SPDYE2Q495Y8 402 aa12.8□□□□□ -0.36
GFM2-210ENST00000515125 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
GFM2-210ENST00000515125 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
GFM2-210ENST00000515125 FXR2P51116 673 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■□□□ 14.1
GFM2-210ENST00000515125 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
GFM2-210ENST00000515125 EVX2Q03828 476 aa12.54□□□□□ -0.4
GFM2-210ENST00000515125 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
GFM2-210ENST00000515125 CLEC11AQ9Y240 323 aa12.54□□□□□ -0.4
GFM2-210ENST00000515125 SPDYE1Q8NFV5 336 aaPredicted RBP12.53□□□□□ -0.4
GFM2-210ENST00000515125 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
GFM2-210ENST00000515125 PRKAR2AP13861 404 aaKnown RBP12.46□□□□□ -0.41
GFM2-210ENST00000515125 HAX1O00165 279 aa12.43□□□□□ -0.42
GFM2-210ENST00000515125 CHADLQ6NUI6 762 aa12.42□□□□□ -0.42
GFM2-210ENST00000515125 PRR29P0C7W0 189 aa12.32□□□□□ -0.44
GFM2-210ENST00000515125 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
GFM2-210ENST00000515125 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
GFM2-210ENST00000515125 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
GFM2-210ENST00000515125 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
GFM2-210ENST00000515125 PROM2Q8N271 834 aa12.14□□□□□ -0.47
GFM2-210ENST00000515125 GABBR2O75899 941 aa12.11□□□□□ -0.47
GFM2-210ENST00000515125 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
GFM2-210ENST00000515125 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
GFM2-210ENST00000515125 MNX1P50219 401 aaPredicted RBP12.05□□□□□ -0.48
GFM2-210ENST00000515125 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
GFM2-210ENST00000515125 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
GFM2-210ENST00000515125 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
GFM2-210ENST00000515125 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
GFM2-210ENST00000515125 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
GFM2-210ENST00000515125 FKBP8Q14318 412 aa11.79□□□□□ -0.52
GFM2-210ENST00000515125 NPM1P06748 294 aaKnown RBP eCLIP11.74□□□□□ -0.53
GFM2-210ENST00000515125 CLCN6P51797 869 aa11.72□□□□□ -0.53
GFM2-210ENST00000515125 LHX8Q68G74 356 aa11.7□□□□□ -0.54
GFM2-210ENST00000515125 MIER1Q8N108 512 aa11.68□□□□□ -0.54
GFM2-210ENST00000515125 CCDC61Q9Y6R9 512 aa11.68□□□□□ -0.54
GFM2-210ENST00000515125 RASEFQ8IZ41 740 aa11.67□□□□□ -0.54
GFM2-210ENST00000515125 TSPYL2Q9H2G4 693 aaPredicted RBP11.67□□□□□ -0.54
GFM2-210ENST00000515125 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
GFM2-210ENST00000515125 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
GFM2-210ENST00000515125 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
GFM2-210ENST00000515125 PAK3O75914 559 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms