RNA–Protein interactions for RNA: ENST00000515080.1

HHIP-208, Transcript of hedgehog interacting protein, humanhuman

TSL 3

Gene HHIP, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHIP-208ENST00000515080 AEBP2Q6ZN18 517 aaPredicted RBP34.16■■■■□ 3.06
HHIP-208ENST00000515080 CHIC1Q5VXU3 224 aa32.13■■■□□ 2.73
HHIP-208ENST00000515080 SENP3Q9H4L4 574 aaPredicted RBP29.06■■■□□ 2.24
HHIP-208ENST00000515080 PHF23Q9BUL5 403 aaPredicted RBP28.68■■■□□ 2.18
HHIP-208ENST00000515080 FOXD1Q16676 465 aa27.19■■□□□ 1.94
HHIP-208ENST00000515080 PLPPR3Q6T4P5 718 aa25.51■■□□□ 1.67
HHIP-208ENST00000515080 MSH5O43196 834 aa25.45■■□□□ 1.66
HHIP-208ENST00000515080 POTEDQ86YR6 584 aa25.33■■□□□ 1.65
HHIP-208ENST00000515080 PIAS4Q8N2W9 510 aaPredicted RBP25.29■■□□□ 1.64
HHIP-208ENST00000515080 PPP6R1Q9UPN7 881 aa25.27■■□□□ 1.64
HHIP-208ENST00000515080 ADRA2BP18089 450 aa25.14■■□□□ 1.62
HHIP-208ENST00000515080 MAPK8IP2Q13387 824 aaPredicted RBP23.18■■□□□ 1.3
HHIP-208ENST00000515080 DMRT2Q9Y5R5 561 aa23.04■■□□□ 1.28
HHIP-208ENST00000515080 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
HHIP-208ENST00000515080 PPP4R3CPQ6ZMV5 832 aa22.36■■□□□ 1.17
HHIP-208ENST00000515080 HOXD11P31277 338 aaPredicted RBP22.11■■□□□ 1.13
HHIP-208ENST00000515080 DCAF8L1A6NGE4 600 aa22.04■■□□□ 1.12
HHIP-208ENST00000515080 CACNB1Q02641 598 aaPredicted RBP21.99■■□□□ 1.11
HHIP-208ENST00000515080 CNKSR2Q8WXI2 1034 aa21.97■■□□□ 1.11
HHIP-208ENST00000515080 RNF216Q9NWF9 866 aaPredicted RBP21.85■■□□□ 1.09
HHIP-208ENST00000515080 RNF39Q9H2S5 420 aa21.76■■□□□ 1.07
HHIP-208ENST00000515080 C1QBPQ07021 282 aaKnown RBP21.37■■□□□ 1.01
HHIP-208ENST00000515080 NCBP3Q53F19 620 aaKnown RBP21.35■■□□□ 1.01
HHIP-208ENST00000515080 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
HHIP-208ENST00000515080 NPM3O75607 178 aaKnown RBP21.15■□□□□ 0.98
HHIP-208ENST00000515080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21■□□□□ 0.95
HHIP-208ENST00000515080 U3KPZ7 1027 aaPredicted RBP20.61■□□□□ 0.89
HHIP-208ENST00000515080 KCNA4P22459 653 aa20.54■□□□□ 0.88
HHIP-208ENST00000515080 SPINK5Q9NQ38 1064 aaPredicted RBP20.39■□□□□ 0.85
HHIP-208ENST00000515080 SLC4A2P04920 1241 aa20.3■□□□□ 0.84
HHIP-208ENST00000515080 CAPN15O75808 1086 aa20.29■□□□□ 0.84
HHIP-208ENST00000515080 DSG3P32926 999 aa20.29■□□□□ 0.84
HHIP-208ENST00000515080 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
HHIP-208ENST00000515080 ABCB7O75027 752 aa19.85■□□□□ 0.77
HHIP-208ENST00000515080 APLP2Q06481 763 aa19.85■□□□□ 0.77
HHIP-208ENST00000515080 ZNF219Q9P2Y4 722 aaPredicted RBP19.84■□□□□ 0.77
HHIP-208ENST00000515080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
HHIP-208ENST00000515080 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
HHIP-208ENST00000515080 POTEHQ6S545 545 aa19.77■□□□□ 0.76
HHIP-208ENST00000515080 SAMD1Q6SPF0 538 aaPredicted RBP19.72■□□□□ 0.75
HHIP-208ENST00000515080 MYCNP04198 464 aaPredicted RBP19.51■□□□□ 0.71
HHIP-208ENST00000515080 POLA2Q14181 598 aa19.35■□□□□ 0.69
HHIP-208ENST00000515080 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
HHIP-208ENST00000515080 RBM42Q9BTD8 480 aaKnown RBP19.27■□□□□ 0.68
HHIP-208ENST00000515080 FOXD4L1Q9NU39 408 aa19.19■□□□□ 0.66
HHIP-208ENST00000515080 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
HHIP-208ENST00000515080 CHRDL2Q6WN34 429 aa19.01■□□□□ 0.63
HHIP-208ENST00000515080 ZBTB22O15209 634 aa18.94■□□□□ 0.62
HHIP-208ENST00000515080 ZBTB12Q9Y330 459 aaPredicted RBP18.87■□□□□ 0.61
HHIP-208ENST00000515080 AKT1S1Q96B36 256 aa18.81■□□□□ 0.6
HHIP-208ENST00000515080 OSCARQ8IYS5 282 aa18.77■□□□□ 0.6
HHIP-208ENST00000515080 REM2Q8IYK8 340 aaPredicted RBP18.68■□□□□ 0.58
HHIP-208ENST00000515080 ATXN8OSP0DMR3 200 aa18.6■□□□□ 0.57
HHIP-208ENST00000515080 PIP4P2Q8N4L2 257 aa18.54■□□□□ 0.56
HHIP-208ENST00000515080 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
HHIP-208ENST00000515080 SP7Q8TDD2 431 aaPredicted RBP18.42■□□□□ 0.54
HHIP-208ENST00000515080 FXR2P51116 673 aaKnown RBP eCLIP18.38■□□□□ 0.53
HHIP-208ENST00000515080 SPDYE2BA6NHP3 402 aa18.31■□□□□ 0.52
HHIP-208ENST00000515080 SPDYE6P0CI01 402 aa18.31■□□□□ 0.52
HHIP-208ENST00000515080 SPDYE2Q495Y8 402 aa18.31■□□□□ 0.52
HHIP-208ENST00000515080 FBLN2P98095 1184 aa18.3■□□□□ 0.52
HHIP-208ENST00000515080 MKRN4PQ13434 485 aaPredicted RBP18.28■□□□□ 0.52
HHIP-208ENST00000515080 HAX1O00165 279 aa18.2■□□□□ 0.5
HHIP-208ENST00000515080 SSUH2Q9Y2M2 353 aa18.09■□□□□ 0.49
HHIP-208ENST00000515080 EVX2Q03828 476 aa18.08■□□□□ 0.48
HHIP-208ENST00000515080 ZNF692Q9BU19 519 aaPredicted RBP18.04■□□□□ 0.48
HHIP-208ENST00000515080 SPDYE1Q8NFV5 336 aaPredicted RBP18.03■□□□□ 0.48
HHIP-208ENST00000515080 CLEC11AQ9Y240 323 aa18.01■□□□□ 0.47
HHIP-208ENST00000515080 PRKAR2AP13861 404 aaKnown RBP17.98■□□□□ 0.47
HHIP-208ENST00000515080 C19orf67A6NJJ6 358 aa17.8■□□□□ 0.44
HHIP-208ENST00000515080 PABPN1Q86U42 306 aaKnown RBP eCLIP17.8■□□□□ 0.44
HHIP-208ENST00000515080 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
HHIP-208ENST00000515080 CHADLQ6NUI6 762 aa17.76■□□□□ 0.43
HHIP-208ENST00000515080 PRR29P0C7W0 189 aa17.67■□□□□ 0.42
HHIP-208ENST00000515080 GABBR2O75899 941 aa17.59■□□□□ 0.41
HHIP-208ENST00000515080 FARP1Q9Y4F1 1045 aaPredicted RBP17.45■□□□□ 0.38
HHIP-208ENST00000515080 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
HHIP-208ENST00000515080 CD44P16070 742 aaKnown RBP17.39■□□□□ 0.37
HHIP-208ENST00000515080 POTEIP0CG38 1075 aa17.27■□□□□ 0.36
HHIP-208ENST00000515080 LHX8Q68G74 356 aa17.26■□□□□ 0.35
HHIP-208ENST00000515080 CREBZFQ9NS37 354 aa17.26■□□□□ 0.35
HHIP-208ENST00000515080 SPDYE4A6NLX3 237 aa17.21■□□□□ 0.35
HHIP-208ENST00000515080 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
HHIP-208ENST00000515080 CLCN6P51797 869 aa17.13■□□□□ 0.33
HHIP-208ENST00000515080 ZNF579Q8NAF0 562 aaKnown RBP17.13■□□□□ 0.33
HHIP-208ENST00000515080 ZRANB1Q9UGI0 708 aa17.1■□□□□ 0.33
HHIP-208ENST00000515080 DCBLD2Q96PD2 775 aa17■□□□□ 0.31
HHIP-208ENST00000515080 GALR2O43603 387 aaPredicted RBP16.97■□□□□ 0.31
HHIP-208ENST00000515080 MNX1P50219 401 aaPredicted RBP16.97■□□□□ 0.31
HHIP-208ENST00000515080 PHF12Q96QT6 1004 aa16.89■□□□□ 0.29
HHIP-208ENST00000515080 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
HHIP-208ENST00000515080 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
HHIP-208ENST00000515080 PROM2Q8N271 834 aa16.83■□□□□ 0.28
HHIP-208ENST00000515080 POTEB2H3BUK9 544 aa16.71■□□□□ 0.27
HHIP-208ENST00000515080 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
HHIP-208ENST00000515080 OTUD5Q96G74 571 aa16.66■□□□□ 0.26
HHIP-208ENST00000515080 MS4A3Q96HJ5 214 aa16.65■□□□□ 0.26
HHIP-208ENST00000515080 ASTLQ6HA08 431 aaPredicted RBP16.59■□□□□ 0.25
HHIP-208ENST00000515080 TSPYL2Q9H2G4 693 aaPredicted RBP16.57■□□□□ 0.24
HHIP-208ENST00000515080 CCDC61Q9Y6R9 512 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms