RNA–Protein interactions for RNA: ENST00000515036.1

TNIP3-206, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS ALT2 TSL 2

Gene TNIP3, Length 712 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-206ENST00000515036 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
TNIP3-206ENST00000515036 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
TNIP3-206ENST00000515036 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
TNIP3-206ENST00000515036 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
TNIP3-206ENST00000515036 FOXD1Q16676 465 aa17.36■□□□□ 0.37
TNIP3-206ENST00000515036 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
TNIP3-206ENST00000515036 ADRA2BP18089 450 aa16.38■□□□□ 0.21
TNIP3-206ENST00000515036 PPP6R1Q9UPN7 881 aa16.37■□□□□ 0.21
TNIP3-206ENST00000515036 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
TNIP3-206ENST00000515036 MSH5O43196 834 aa16.18■□□□□ 0.18
TNIP3-206ENST00000515036 POTEDQ86YR6 584 aa15.5■□□□□ 0.07
TNIP3-206ENST00000515036 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
TNIP3-206ENST00000515036 MAPK8IP2Q13387 824 aaPredicted RBP14.99□□□□□ -0.01
TNIP3-206ENST00000515036 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
TNIP3-206ENST00000515036 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
TNIP3-206ENST00000515036 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
TNIP3-206ENST00000515036 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
TNIP3-206ENST00000515036 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
TNIP3-206ENST00000515036 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
TNIP3-206ENST00000515036 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
TNIP3-206ENST00000515036 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
TNIP3-206ENST00000515036 KCNA4P22459 653 aa13.98□□□□□ -0.17
TNIP3-206ENST00000515036 CACNB1Q02641 598 aaPredicted RBP13.86□□□□□ -0.19
TNIP3-206ENST00000515036 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
TNIP3-206ENST00000515036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
TNIP3-206ENST00000515036 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
TNIP3-206ENST00000515036 C1QBPQ07021 282 aaKnown RBP13.62□□□□□ -0.23
TNIP3-206ENST00000515036 U3KPZ7 1027 aaPredicted RBP13.4□□□□□ -0.26
TNIP3-206ENST00000515036 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
TNIP3-206ENST00000515036 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
TNIP3-206ENST00000515036 CAPN15O75808 1086 aa13.22□□□□□ -0.29
TNIP3-206ENST00000515036 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
TNIP3-206ENST00000515036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
TNIP3-206ENST00000515036 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
TNIP3-206ENST00000515036 APLP2Q06481 763 aa13.09□□□□□ -0.31
TNIP3-206ENST00000515036 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
TNIP3-206ENST00000515036 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
TNIP3-206ENST00000515036 MYCNP04198 464 aaPredicted RBP13.01□□□□□ -0.33
TNIP3-206ENST00000515036 DSG3P32926 999 aa13□□□□□ -0.33
TNIP3-206ENST00000515036 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
TNIP3-206ENST00000515036 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
TNIP3-206ENST00000515036 ABCB7O75027 752 aa12.93□□□□□ -0.34
TNIP3-206ENST00000515036 ZBTB22O15209 634 aa12.81□□□□□ -0.36
TNIP3-206ENST00000515036 POLA2Q14181 598 aa12.71□□□□□ -0.37
TNIP3-206ENST00000515036 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
TNIP3-206ENST00000515036 ATXN8OSP0DMR3 200 aa12.51□□□□□ -0.41
TNIP3-206ENST00000515036 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.41
TNIP3-206ENST00000515036 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
TNIP3-206ENST00000515036 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
TNIP3-206ENST00000515036 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
TNIP3-206ENST00000515036 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
TNIP3-206ENST00000515036 FBLN2P98095 1184 aa12.25□□□□□ -0.45
TNIP3-206ENST00000515036 POTEHQ6S545 545 aa12.2□□□□□ -0.46
TNIP3-206ENST00000515036 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
TNIP3-206ENST00000515036 MKRN4PQ13434 485 aaPredicted RBP12.1□□□□□ -0.47
TNIP3-206ENST00000515036 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
TNIP3-206ENST00000515036 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
TNIP3-206ENST00000515036 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
TNIP3-206ENST00000515036 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
TNIP3-206ENST00000515036 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
TNIP3-206ENST00000515036 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
TNIP3-206ENST00000515036 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
TNIP3-206ENST00000515036 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
TNIP3-206ENST00000515036 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
TNIP3-206ENST00000515036 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
TNIP3-206ENST00000515036 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
TNIP3-206ENST00000515036 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
TNIP3-206ENST00000515036 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.53
TNIP3-206ENST00000515036 SPDYE4A6NLX3 237 aa11.68□□□□□ -0.54
TNIP3-206ENST00000515036 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
TNIP3-206ENST00000515036 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
TNIP3-206ENST00000515036 HAX1O00165 279 aa11.65□□□□□ -0.54
TNIP3-206ENST00000515036 CHADLQ6NUI6 762 aa11.6□□□□□ -0.55
TNIP3-206ENST00000515036 SP7Q8TDD2 431 aaPredicted RBP11.51□□□□□ -0.57
TNIP3-206ENST00000515036 STAG3Q9UJ98 1225 aa11.51□□□□□ -0.57
TNIP3-206ENST00000515036 EVX2Q03828 476 aa11.44□□□□□ -0.58
TNIP3-206ENST00000515036 FARP1Q9Y4F1 1045 aaPredicted RBP11.4□□□□□ -0.58
TNIP3-206ENST00000515036 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
TNIP3-206ENST00000515036 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
TNIP3-206ENST00000515036 FKBP8Q14318 412 aa11.32□□□□□ -0.6
TNIP3-206ENST00000515036 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
TNIP3-206ENST00000515036 PROM2Q8N271 834 aa11.29□□□□□ -0.6
TNIP3-206ENST00000515036 GABBR2O75899 941 aa11.21□□□□□ -0.61
TNIP3-206ENST00000515036 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
TNIP3-206ENST00000515036 ZRANB1Q9UGI0 708 aa11.2□□□□□ -0.62
TNIP3-206ENST00000515036 MIER1Q8N108 512 aa11.18□□□□□ -0.62
TNIP3-206ENST00000515036 PLEKHG5O94827 1062 aa11.17□□□□□ -0.62
TNIP3-206ENST00000515036 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
TNIP3-206ENST00000515036 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
TNIP3-206ENST00000515036 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
TNIP3-206ENST00000515036 ZNF579Q8NAF0 562 aaKnown RBP11.07□□□□□ -0.64
TNIP3-206ENST00000515036 TSPYL2Q9H2G4 693 aaPredicted RBP11.05□□□□□ -0.64
TNIP3-206ENST00000515036 PHF12Q96QT6 1004 aa11.04□□□□□ -0.64
TNIP3-206ENST00000515036 CLCN6P51797 869 aa11.03□□□□□ -0.64
TNIP3-206ENST00000515036 DCBLD2Q96PD2 775 aa11.01□□□□□ -0.65
TNIP3-206ENST00000515036 FBXO3Q9UK99 471 aa11.01□□□□□ -0.65
TNIP3-206ENST00000515036 GALR2O43603 387 aaPredicted RBP10.97□□□□□ -0.65
TNIP3-206ENST00000515036 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
TNIP3-206ENST00000515036 POTEIP0CG38 1075 aa10.93□□□□□ -0.66
TNIP3-206ENST00000515036 RASEFQ8IZ41 740 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms