RNA–Protein interactions for RNA: ENST00000514806.5

SLC38A9-221, Transcript of solute carrier family 38 member 9, humanhuman

TSL 2

Gene SLC38A9, Length 760 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-221ENST00000514806 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
SLC38A9-221ENST00000514806 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
SLC38A9-221ENST00000514806 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
SLC38A9-221ENST00000514806 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
SLC38A9-221ENST00000514806 FOXD1Q16676 465 aa16.92■□□□□ 0.3
SLC38A9-221ENST00000514806 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
SLC38A9-221ENST00000514806 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
SLC38A9-221ENST00000514806 ADRA2BP18089 450 aa15.99■□□□□ 0.15
SLC38A9-221ENST00000514806 PIAS4Q8N2W9 510 aaPredicted RBP15.91■□□□□ 0.14
SLC38A9-221ENST00000514806 MSH5O43196 834 aa15.76■□□□□ 0.11
SLC38A9-221ENST00000514806 POTEDQ86YR6 584 aa14.93□□□□□ -0.02
SLC38A9-221ENST00000514806 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
SLC38A9-221ENST00000514806 MAPK8IP2Q13387 824 aaPredicted RBP14.6□□□□□ -0.07
SLC38A9-221ENST00000514806 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
SLC38A9-221ENST00000514806 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
SLC38A9-221ENST00000514806 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
SLC38A9-221ENST00000514806 NCBP3Q53F19 620 aaKnown RBP14.08□□□□□ -0.16
SLC38A9-221ENST00000514806 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
SLC38A9-221ENST00000514806 RNF216Q9NWF9 866 aaPredicted RBP14□□□□□ -0.17
SLC38A9-221ENST00000514806 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
SLC38A9-221ENST00000514806 NPM3O75607 178 aaKnown RBP13.85□□□□□ -0.19
SLC38A9-221ENST00000514806 KCNA4P22459 653 aa13.81□□□□□ -0.2
SLC38A9-221ENST00000514806 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
SLC38A9-221ENST00000514806 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
SLC38A9-221ENST00000514806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
SLC38A9-221ENST00000514806 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
SLC38A9-221ENST00000514806 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
SLC38A9-221ENST00000514806 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
SLC38A9-221ENST00000514806 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
SLC38A9-221ENST00000514806 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
SLC38A9-221ENST00000514806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
SLC38A9-221ENST00000514806 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
SLC38A9-221ENST00000514806 CAPN15O75808 1086 aa12.86□□□□□ -0.35
SLC38A9-221ENST00000514806 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
SLC38A9-221ENST00000514806 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
SLC38A9-221ENST00000514806 APLP2Q06481 763 aa12.82□□□□□ -0.36
SLC38A9-221ENST00000514806 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
SLC38A9-221ENST00000514806 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
SLC38A9-221ENST00000514806 TRHP20396 242 aaPredicted RBP12.71□□□□□ -0.37
SLC38A9-221ENST00000514806 ZBTB22O15209 634 aa12.69□□□□□ -0.38
SLC38A9-221ENST00000514806 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
SLC38A9-221ENST00000514806 DSG3P32926 999 aa12.68□□□□□ -0.38
SLC38A9-221ENST00000514806 ABCB7O75027 752 aa12.59□□□□□ -0.39
SLC38A9-221ENST00000514806 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
SLC38A9-221ENST00000514806 POLA2Q14181 598 aa12.41□□□□□ -0.42
SLC38A9-221ENST00000514806 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
SLC38A9-221ENST00000514806 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
SLC38A9-221ENST00000514806 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
SLC38A9-221ENST00000514806 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
SLC38A9-221ENST00000514806 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
SLC38A9-221ENST00000514806 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
SLC38A9-221ENST00000514806 FBLN2P98095 1184 aa12.02□□□□□ -0.49
SLC38A9-221ENST00000514806 MKRN4PQ13434 485 aaPredicted RBP11.91□□□□□ -0.5
SLC38A9-221ENST00000514806 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
SLC38A9-221ENST00000514806 SPDYE2BA6NHP3 402 aa11.83□□□□□ -0.52
SLC38A9-221ENST00000514806 SPDYE6P0CI01 402 aa11.83□□□□□ -0.52
SLC38A9-221ENST00000514806 SPDYE2Q495Y8 402 aa11.83□□□□□ -0.52
SLC38A9-221ENST00000514806 REM2Q8IYK8 340 aaPredicted RBP11.77□□□□□ -0.53
SLC38A9-221ENST00000514806 POTEHQ6S545 545 aa11.76□□□□□ -0.53
SLC38A9-221ENST00000514806 CHRDL2Q6WN34 429 aa11.74□□□□□ -0.53
SLC38A9-221ENST00000514806 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
SLC38A9-221ENST00000514806 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
SLC38A9-221ENST00000514806 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
SLC38A9-221ENST00000514806 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
SLC38A9-221ENST00000514806 SPDYE1Q8NFV5 336 aaPredicted RBP11.57□□□□□ -0.56
SLC38A9-221ENST00000514806 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
SLC38A9-221ENST00000514806 SPDYE4A6NLX3 237 aa11.51□□□□□ -0.57
SLC38A9-221ENST00000514806 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
SLC38A9-221ENST00000514806 FXR2P51116 673 aaKnown RBP eCLIP11.48□□□□□ -0.57
SLC38A9-221ENST00000514806 PRR29P0C7W0 189 aa11.39□□□□□ -0.59
SLC38A9-221ENST00000514806 PRKAR2AP13861 404 aaKnown RBP11.36□□□□□ -0.59
SLC38A9-221ENST00000514806 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
SLC38A9-221ENST00000514806 CHADLQ6NUI6 762 aa11.29□□□□□ -0.6
SLC38A9-221ENST00000514806 HAX1O00165 279 aa11.27□□□□□ -0.61
SLC38A9-221ENST00000514806 PROM2Q8N271 834 aa11.23□□□□□ -0.61
SLC38A9-221ENST00000514806 FKBP8Q14318 412 aa11.22□□□□□ -0.61
SLC38A9-221ENST00000514806 SP7Q8TDD2 431 aaPredicted RBP11.15□□□□□ -0.62
SLC38A9-221ENST00000514806 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
SLC38A9-221ENST00000514806 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
SLC38A9-221ENST00000514806 C19orf67A6NJJ6 358 aa11.1□□□□□ -0.63
SLC38A9-221ENST00000514806 EVX2Q03828 476 aa11.09□□□□□ -0.63
SLC38A9-221ENST00000514806 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
SLC38A9-221ENST00000514806 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
SLC38A9-221ENST00000514806 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
SLC38A9-221ENST00000514806 MIER1Q8N108 512 aa10.96□□□□□ -0.65
SLC38A9-221ENST00000514806 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
SLC38A9-221ENST00000514806 PLCD3Q8N3E9 789 aa10.93□□□□□ -0.66
SLC38A9-221ENST00000514806 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
SLC38A9-221ENST00000514806 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
SLC38A9-221ENST00000514806 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
SLC38A9-221ENST00000514806 GABBR2O75899 941 aa10.88□□□□□ -0.67
SLC38A9-221ENST00000514806 ZNF579Q8NAF0 562 aaKnown RBP10.85□□□□□ -0.67
SLC38A9-221ENST00000514806 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
SLC38A9-221ENST00000514806 CLCN6P51797 869 aa10.79□□□□□ -0.68
SLC38A9-221ENST00000514806 TSPYL2Q9H2G4 693 aaPredicted RBP10.79□□□□□ -0.68
SLC38A9-221ENST00000514806 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
SLC38A9-221ENST00000514806 VASPP50552 380 aaPredicted RBP10.77□□□□□ -0.69
SLC38A9-221ENST00000514806 RASEFQ8IZ41 740 aa10.74□□□□□ -0.69
SLC38A9-221ENST00000514806 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
SLC38A9-221ENST00000514806 CCDC61Q9Y6R9 512 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms