RNA–Protein interactions for RNA: ENST00000514520.5

CNGA1-208, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 2

Gene CNGA1, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-208ENST00000514520 AEBP2Q6ZN18 517 aaPredicted RBP24.33■■□□□ 1.49
CNGA1-208ENST00000514520 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
CNGA1-208ENST00000514520 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
CNGA1-208ENST00000514520 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
CNGA1-208ENST00000514520 FOXD1Q16676 465 aa19.23■□□□□ 0.67
CNGA1-208ENST00000514520 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
CNGA1-208ENST00000514520 PPP6R1Q9UPN7 881 aa18.16■□□□□ 0.5
CNGA1-208ENST00000514520 ADRA2BP18089 450 aa18.06■□□□□ 0.48
CNGA1-208ENST00000514520 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
CNGA1-208ENST00000514520 MSH5O43196 834 aa17.79■□□□□ 0.44
CNGA1-208ENST00000514520 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
CNGA1-208ENST00000514520 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
CNGA1-208ENST00000514520 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
CNGA1-208ENST00000514520 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
CNGA1-208ENST00000514520 SCAF1Q9H7N4 1312 aaKnown RBP16.22■□□□□ 0.19
CNGA1-208ENST00000514520 CNKSR2Q8WXI2 1034 aa15.82■□□□□ 0.12
CNGA1-208ENST00000514520 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
CNGA1-208ENST00000514520 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
CNGA1-208ENST00000514520 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
CNGA1-208ENST00000514520 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
CNGA1-208ENST00000514520 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
CNGA1-208ENST00000514520 KCNA4P22459 653 aa15.35■□□□□ 0.05
CNGA1-208ENST00000514520 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
CNGA1-208ENST00000514520 RNF39Q9H2S5 420 aa15.28■□□□□ 0.04
CNGA1-208ENST00000514520 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
CNGA1-208ENST00000514520 C1QBPQ07021 282 aaKnown RBP14.95□□□□□ -0.02
CNGA1-208ENST00000514520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
CNGA1-208ENST00000514520 SLC4A2P04920 1241 aa14.81□□□□□ -0.04
CNGA1-208ENST00000514520 U3KPZ7 1027 aaPredicted RBP14.81□□□□□ -0.04
CNGA1-208ENST00000514520 SPINK5Q9NQ38 1064 aaPredicted RBP14.57□□□□□ -0.08
CNGA1-208ENST00000514520 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
CNGA1-208ENST00000514520 CAPN15O75808 1086 aa14.38□□□□□ -0.11
CNGA1-208ENST00000514520 DSG3P32926 999 aa14.36□□□□□ -0.11
CNGA1-208ENST00000514520 ZBTB22O15209 634 aa14.23□□□□□ -0.13
CNGA1-208ENST00000514520 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
CNGA1-208ENST00000514520 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
CNGA1-208ENST00000514520 ABCB7O75027 752 aa14.17□□□□□ -0.14
CNGA1-208ENST00000514520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
CNGA1-208ENST00000514520 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
CNGA1-208ENST00000514520 SAMD1Q6SPF0 538 aaPredicted RBP14.16□□□□□ -0.14
CNGA1-208ENST00000514520 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
CNGA1-208ENST00000514520 APLP2Q06481 763 aa14.14□□□□□ -0.15
CNGA1-208ENST00000514520 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
CNGA1-208ENST00000514520 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
CNGA1-208ENST00000514520 POLA2Q14181 598 aa13.88□□□□□ -0.19
CNGA1-208ENST00000514520 POTEHQ6S545 545 aa13.65□□□□□ -0.22
CNGA1-208ENST00000514520 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
CNGA1-208ENST00000514520 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
CNGA1-208ENST00000514520 RBM42Q9BTD8 480 aaKnown RBP13.58□□□□□ -0.24
CNGA1-208ENST00000514520 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
CNGA1-208ENST00000514520 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
CNGA1-208ENST00000514520 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
CNGA1-208ENST00000514520 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
CNGA1-208ENST00000514520 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
CNGA1-208ENST00000514520 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
CNGA1-208ENST00000514520 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
CNGA1-208ENST00000514520 FBLN2P98095 1184 aa13.21□□□□□ -0.29
CNGA1-208ENST00000514520 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
CNGA1-208ENST00000514520 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
CNGA1-208ENST00000514520 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
CNGA1-208ENST00000514520 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
CNGA1-208ENST00000514520 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
CNGA1-208ENST00000514520 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
CNGA1-208ENST00000514520 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
CNGA1-208ENST00000514520 FXR2P51116 673 aaKnown RBP eCLIP12.99□□□□□ -0.33
CNGA1-208ENST00000514520 PABPN1Q86U42 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
CNGA1-208ENST00000514520 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
CNGA1-208ENST00000514520 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
CNGA1-208ENST00000514520 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
CNGA1-208ENST00000514520 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
CNGA1-208ENST00000514520 EVX2Q03828 476 aa12.76□□□□□ -0.37
CNGA1-208ENST00000514520 HAX1O00165 279 aa12.73□□□□□ -0.37
CNGA1-208ENST00000514520 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
CNGA1-208ENST00000514520 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
CNGA1-208ENST00000514520 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
CNGA1-208ENST00000514520 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
CNGA1-208ENST00000514520 PROM2Q8N271 834 aa12.52□□□□□ -0.41
CNGA1-208ENST00000514520 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
CNGA1-208ENST00000514520 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
CNGA1-208ENST00000514520 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
CNGA1-208ENST00000514520 MNX1P50219 401 aaPredicted RBP12.37□□□□□ -0.43
CNGA1-208ENST00000514520 CD44P16070 742 aaKnown RBP12.35□□□□□ -0.43
CNGA1-208ENST00000514520 GABBR2O75899 941 aa12.33□□□□□ -0.44
CNGA1-208ENST00000514520 FKBP8Q14318 412 aa12.24□□□□□ -0.45
CNGA1-208ENST00000514520 POTEIP0CG38 1075 aa12.2□□□□□ -0.46
CNGA1-208ENST00000514520 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
CNGA1-208ENST00000514520 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
CNGA1-208ENST00000514520 PHF12Q96QT6 1004 aa12.14□□□□□ -0.47
CNGA1-208ENST00000514520 CLCN6P51797 869 aa12.12□□□□□ -0.47
CNGA1-208ENST00000514520 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
CNGA1-208ENST00000514520 NPM1P06748 294 aaKnown RBP eCLIP12.05□□□□□ -0.48
CNGA1-208ENST00000514520 MIER1Q8N108 512 aa12.03□□□□□ -0.48
CNGA1-208ENST00000514520 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
CNGA1-208ENST00000514520 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
CNGA1-208ENST00000514520 LHX8Q68G74 356 aa11.99□□□□□ -0.49
CNGA1-208ENST00000514520 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
CNGA1-208ENST00000514520 CCDC61Q9Y6R9 512 aa11.98□□□□□ -0.49
CNGA1-208ENST00000514520 MS4A3Q96HJ5 214 aa11.96□□□□□ -0.49
CNGA1-208ENST00000514520 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
CNGA1-208ENST00000514520 PLCD3Q8N3E9 789 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms