RNA–Protein interactions for RNA: ENST00000514352.5

CCSER1-212, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 2

Gene CCSER1, Length 493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-212ENST00000514352 AEBP2Q6ZN18 517 aaPredicted RBP23.56■■□□□ 1.36
CCSER1-212ENST00000514352 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
CCSER1-212ENST00000514352 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
CCSER1-212ENST00000514352 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
CCSER1-212ENST00000514352 FOXD1Q16676 465 aa18.88■□□□□ 0.61
CCSER1-212ENST00000514352 POTEDQ86YR6 584 aa18■□□□□ 0.47
CCSER1-212ENST00000514352 MSH5O43196 834 aa17.94■□□□□ 0.46
CCSER1-212ENST00000514352 PIAS4Q8N2W9 510 aaPredicted RBP17.6■□□□□ 0.41
CCSER1-212ENST00000514352 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
CCSER1-212ENST00000514352 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
CCSER1-212ENST00000514352 ADRA2BP18089 450 aa17.28■□□□□ 0.36
CCSER1-212ENST00000514352 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.16
CCSER1-212ENST00000514352 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
CCSER1-212ENST00000514352 MAPK8IP2Q13387 824 aaPredicted RBP15.96■□□□□ 0.15
CCSER1-212ENST00000514352 CACNB1Q02641 598 aaPredicted RBP15.58■□□□□ 0.08
CCSER1-212ENST00000514352 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
CCSER1-212ENST00000514352 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
CCSER1-212ENST00000514352 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
CCSER1-212ENST00000514352 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
CCSER1-212ENST00000514352 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
CCSER1-212ENST00000514352 RNF216Q9NWF9 866 aaPredicted RBP15.11■□□□□ 0.01
CCSER1-212ENST00000514352 C1QBPQ07021 282 aaKnown RBP15.04■□□□□ -0
CCSER1-212ENST00000514352 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
CCSER1-212ENST00000514352 NCBP3Q53F19 620 aaKnown RBP14.73□□□□□ -0.05
CCSER1-212ENST00000514352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCSER1-212ENST00000514352 NPM3O75607 178 aaKnown RBP14.37□□□□□ -0.11
CCSER1-212ENST00000514352 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
CCSER1-212ENST00000514352 CAPN15O75808 1086 aa14.13□□□□□ -0.15
CCSER1-212ENST00000514352 DSG3P32926 999 aa14.1□□□□□ -0.15
CCSER1-212ENST00000514352 POTEHQ6S545 545 aa14.08□□□□□ -0.16
CCSER1-212ENST00000514352 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
CCSER1-212ENST00000514352 APLP2Q06481 763 aa13.95□□□□□ -0.18
CCSER1-212ENST00000514352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
CCSER1-212ENST00000514352 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
CCSER1-212ENST00000514352 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
CCSER1-212ENST00000514352 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
CCSER1-212ENST00000514352 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
CCSER1-212ENST00000514352 KCNA4P22459 653 aa13.74□□□□□ -0.21
CCSER1-212ENST00000514352 ABCB7O75027 752 aa13.69□□□□□ -0.22
CCSER1-212ENST00000514352 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
CCSER1-212ENST00000514352 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
CCSER1-212ENST00000514352 POLA2Q14181 598 aa13.37□□□□□ -0.27
CCSER1-212ENST00000514352 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
CCSER1-212ENST00000514352 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
CCSER1-212ENST00000514352 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
CCSER1-212ENST00000514352 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
CCSER1-212ENST00000514352 SP7Q8TDD2 431 aaPredicted RBP13.04□□□□□ -0.32
CCSER1-212ENST00000514352 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
CCSER1-212ENST00000514352 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
CCSER1-212ENST00000514352 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
CCSER1-212ENST00000514352 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
CCSER1-212ENST00000514352 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
CCSER1-212ENST00000514352 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
CCSER1-212ENST00000514352 HAX1O00165 279 aa12.85□□□□□ -0.35
CCSER1-212ENST00000514352 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.36
CCSER1-212ENST00000514352 PITPNM1O00562 1244 aa12.8□□□□□ -0.36
CCSER1-212ENST00000514352 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
CCSER1-212ENST00000514352 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
CCSER1-212ENST00000514352 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
CCSER1-212ENST00000514352 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
CCSER1-212ENST00000514352 FBLN2P98095 1184 aa12.66□□□□□ -0.38
CCSER1-212ENST00000514352 ZBTB22O15209 634 aa12.55□□□□□ -0.4
CCSER1-212ENST00000514352 SPDYE1Q8NFV5 336 aaPredicted RBP12.55□□□□□ -0.4
CCSER1-212ENST00000514352 EVX2Q03828 476 aa12.52□□□□□ -0.41
CCSER1-212ENST00000514352 CLEC11AQ9Y240 323 aa12.52□□□□□ -0.41
CCSER1-212ENST00000514352 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
CCSER1-212ENST00000514352 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
CCSER1-212ENST00000514352 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
CCSER1-212ENST00000514352 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
CCSER1-212ENST00000514352 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
CCSER1-212ENST00000514352 GABBR2O75899 941 aa12.31□□□□□ -0.44
CCSER1-212ENST00000514352 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
CCSER1-212ENST00000514352 LHX8Q68G74 356 aa12.24□□□□□ -0.45
CCSER1-212ENST00000514352 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
CCSER1-212ENST00000514352 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCSER1-212ENST00000514352 CLCN6P51797 869 aa12.18□□□□□ -0.46
CCSER1-212ENST00000514352 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
CCSER1-212ENST00000514352 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
CCSER1-212ENST00000514352 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
CCSER1-212ENST00000514352 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
CCSER1-212ENST00000514352 STAG3Q9UJ98 1225 aa11.93□□□□□ -0.5
CCSER1-212ENST00000514352 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
CCSER1-212ENST00000514352 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
CCSER1-212ENST00000514352 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
CCSER1-212ENST00000514352 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
CCSER1-212ENST00000514352 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
CCSER1-212ENST00000514352 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
CCSER1-212ENST00000514352 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
CCSER1-212ENST00000514352 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCSER1-212ENST00000514352 SPDYE4A6NLX3 237 aa11.69□□□□□ -0.54
CCSER1-212ENST00000514352 OTUD5Q96G74 571 aa11.64□□□□□ -0.55
CCSER1-212ENST00000514352 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
CCSER1-212ENST00000514352 POTEB2H3BUK9 544 aa11.56□□□□□ -0.56
CCSER1-212ENST00000514352 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
CCSER1-212ENST00000514352 POTEMA6NI47 508 aa11.52□□□□□ -0.57
CCSER1-212ENST00000514352 C7P10643 843 aa11.52□□□□□ -0.57
CCSER1-212ENST00000514352 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
CCSER1-212ENST00000514352 ASTLQ6HA08 431 aaPredicted RBP11.5□□□□□ -0.57
CCSER1-212ENST00000514352 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
CCSER1-212ENST00000514352 PELP1Q8IZL8 1130 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms