RNA–Protein interactions for RNA: ENST00000514262.5

ITGA1-207, Transcript of integrin subunit alpha 1, humanhuman

TSL 5

Gene ITGA1, Length 556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-207ENST00000514262 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
ITGA1-207ENST00000514262 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
ITGA1-207ENST00000514262 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.09
ITGA1-207ENST00000514262 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
ITGA1-207ENST00000514262 FOXD1Q16676 465 aa20.35■□□□□ 0.85
ITGA1-207ENST00000514262 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
ITGA1-207ENST00000514262 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
ITGA1-207ENST00000514262 ADRA2BP18089 450 aa19.26■□□□□ 0.67
ITGA1-207ENST00000514262 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
ITGA1-207ENST00000514262 MSH5O43196 834 aa18.92■□□□□ 0.62
ITGA1-207ENST00000514262 POTEDQ86YR6 584 aa17.8■□□□□ 0.44
ITGA1-207ENST00000514262 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
ITGA1-207ENST00000514262 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.4
ITGA1-207ENST00000514262 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
ITGA1-207ENST00000514262 DMRT2Q9Y5R5 561 aa17.42■□□□□ 0.38
ITGA1-207ENST00000514262 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
ITGA1-207ENST00000514262 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
ITGA1-207ENST00000514262 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
ITGA1-207ENST00000514262 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
ITGA1-207ENST00000514262 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
ITGA1-207ENST00000514262 KCNA4P22459 653 aa16.76■□□□□ 0.27
ITGA1-207ENST00000514262 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
ITGA1-207ENST00000514262 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
ITGA1-207ENST00000514262 RNF39Q9H2S5 420 aa16.17■□□□□ 0.18
ITGA1-207ENST00000514262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
ITGA1-207ENST00000514262 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
ITGA1-207ENST00000514262 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
ITGA1-207ENST00000514262 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
ITGA1-207ENST00000514262 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
ITGA1-207ENST00000514262 U3KPZ7 1027 aaPredicted RBP15.82■□□□□ 0.12
ITGA1-207ENST00000514262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
ITGA1-207ENST00000514262 HNRNPUL2Q1KMD3 747 aaKnown RBP15.53■□□□□ 0.08
ITGA1-207ENST00000514262 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
ITGA1-207ENST00000514262 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
ITGA1-207ENST00000514262 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
ITGA1-207ENST00000514262 APLP2Q06481 763 aa15.45■□□□□ 0.06
ITGA1-207ENST00000514262 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
ITGA1-207ENST00000514262 CAPN15O75808 1086 aa15.43■□□□□ 0.06
ITGA1-207ENST00000514262 ZBTB22O15209 634 aa15.41■□□□□ 0.06
ITGA1-207ENST00000514262 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
ITGA1-207ENST00000514262 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
ITGA1-207ENST00000514262 DSG3P32926 999 aa15.27■□□□□ 0.04
ITGA1-207ENST00000514262 ABCB7O75027 752 aa15.09■□□□□ 0.01
ITGA1-207ENST00000514262 ATF5Q9Y2D1 282 aaPredicted RBP15.09■□□□□ 0.01
ITGA1-207ENST00000514262 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
ITGA1-207ENST00000514262 ATXN8OSP0DMR3 200 aa15.05■□□□□ -0
ITGA1-207ENST00000514262 EHMT2Q96KQ7 1210 aa15.03■□□□□ -0
ITGA1-207ENST00000514262 POLA2Q14181 598 aa14.97□□□□□ -0.01
ITGA1-207ENST00000514262 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.05
ITGA1-207ENST00000514262 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
ITGA1-207ENST00000514262 FBLN2P98095 1184 aa14.5□□□□□ -0.09
ITGA1-207ENST00000514262 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
ITGA1-207ENST00000514262 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
ITGA1-207ENST00000514262 AKT1S1Q96B36 256 aa14.31□□□□□ -0.12
ITGA1-207ENST00000514262 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
ITGA1-207ENST00000514262 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
ITGA1-207ENST00000514262 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
ITGA1-207ENST00000514262 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
ITGA1-207ENST00000514262 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
ITGA1-207ENST00000514262 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
ITGA1-207ENST00000514262 CHRDL2Q6WN34 429 aa14.08□□□□□ -0.16
ITGA1-207ENST00000514262 POTEHQ6S545 545 aa14.03□□□□□ -0.16
ITGA1-207ENST00000514262 PITPNM1O00562 1244 aa14□□□□□ -0.17
ITGA1-207ENST00000514262 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
ITGA1-207ENST00000514262 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
ITGA1-207ENST00000514262 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
ITGA1-207ENST00000514262 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
ITGA1-207ENST00000514262 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.2
ITGA1-207ENST00000514262 PIP4P2Q8N4L2 257 aa13.82□□□□□ -0.2
ITGA1-207ENST00000514262 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
ITGA1-207ENST00000514262 PROM2Q8N271 834 aa13.68□□□□□ -0.22
ITGA1-207ENST00000514262 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
ITGA1-207ENST00000514262 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
ITGA1-207ENST00000514262 FKBP8Q14318 412 aa13.62□□□□□ -0.23
ITGA1-207ENST00000514262 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
ITGA1-207ENST00000514262 HAX1O00165 279 aa13.48□□□□□ -0.25
ITGA1-207ENST00000514262 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
ITGA1-207ENST00000514262 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
ITGA1-207ENST00000514262 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
ITGA1-207ENST00000514262 EVX2Q03828 476 aa13.33□□□□□ -0.28
ITGA1-207ENST00000514262 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
ITGA1-207ENST00000514262 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
ITGA1-207ENST00000514262 MIER1Q8N108 512 aa13.27□□□□□ -0.29
ITGA1-207ENST00000514262 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
ITGA1-207ENST00000514262 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
ITGA1-207ENST00000514262 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
ITGA1-207ENST00000514262 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
ITGA1-207ENST00000514262 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
ITGA1-207ENST00000514262 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
ITGA1-207ENST00000514262 ZBTB47Q9UFB7 747 aaPredicted RBP13.1□□□□□ -0.31
ITGA1-207ENST00000514262 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
ITGA1-207ENST00000514262 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
ITGA1-207ENST00000514262 GABBR2O75899 941 aa13.06□□□□□ -0.32
ITGA1-207ENST00000514262 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
ITGA1-207ENST00000514262 CLCN6P51797 869 aa13.05□□□□□ -0.32
ITGA1-207ENST00000514262 TSPYL2Q9H2G4 693 aaPredicted RBP12.99□□□□□ -0.33
ITGA1-207ENST00000514262 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
ITGA1-207ENST00000514262 NUBP1P53384 320 aa12.96□□□□□ -0.33
ITGA1-207ENST00000514262 PHF12Q96QT6 1004 aa12.94□□□□□ -0.34
ITGA1-207ENST00000514262 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms