RNA–Protein interactions for RNA: ENST00000514203.1

EPB41L4A-209, Transcript of erythrocyte membrane protein band 4.1 like 4A, humanhuman

TSL 5

Gene EPB41L4A, Length 235 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L4A-209ENST00000514203 AEBP2Q6ZN18 517 aaPredicted RBP29.16■■■□□ 2.26
EPB41L4A-209ENST00000514203 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
EPB41L4A-209ENST00000514203 SENP3Q9H4L4 574 aaPredicted RBP24.85■■□□□ 1.57
EPB41L4A-209ENST00000514203 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
EPB41L4A-209ENST00000514203 FOXD1Q16676 465 aa23.07■■□□□ 1.28
EPB41L4A-209ENST00000514203 PLPPR3Q6T4P5 718 aa22.78■■□□□ 1.24
EPB41L4A-209ENST00000514203 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
EPB41L4A-209ENST00000514203 ADRA2BP18089 450 aa21.91■■□□□ 1.1
EPB41L4A-209ENST00000514203 PIAS4Q8N2W9 510 aaPredicted RBP21.7■■□□□ 1.06
EPB41L4A-209ENST00000514203 MSH5O43196 834 aa21.44■■□□□ 1.02
EPB41L4A-209ENST00000514203 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
EPB41L4A-209ENST00000514203 POTEDQ86YR6 584 aa20.04■□□□□ 0.8
EPB41L4A-209ENST00000514203 PPP4R3CPQ6ZMV5 832 aa20.02■□□□□ 0.8
EPB41L4A-209ENST00000514203 MAPK8IP2Q13387 824 aaPredicted RBP19.97■□□□□ 0.79
EPB41L4A-209ENST00000514203 DMRT2Q9Y5R5 561 aa19.76■□□□□ 0.75
EPB41L4A-209ENST00000514203 CNKSR2Q8WXI2 1034 aa19.54■□□□□ 0.72
EPB41L4A-209ENST00000514203 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
EPB41L4A-209ENST00000514203 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
EPB41L4A-209ENST00000514203 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
EPB41L4A-209ENST00000514203 KCNA4P22459 653 aa19.18■□□□□ 0.66
EPB41L4A-209ENST00000514203 NPM3O75607 178 aaKnown RBP19.1■□□□□ 0.65
EPB41L4A-209ENST00000514203 DCAF8L1A6NGE4 600 aa18.96■□□□□ 0.63
EPB41L4A-209ENST00000514203 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
EPB41L4A-209ENST00000514203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.53
EPB41L4A-209ENST00000514203 RNF39Q9H2S5 420 aa18.31■□□□□ 0.52
EPB41L4A-209ENST00000514203 SLC4A1APQ9BWU0 796 aaKnown RBP18.23■□□□□ 0.51
EPB41L4A-209ENST00000514203 SLC4A2P04920 1241 aa18.11■□□□□ 0.49
EPB41L4A-209ENST00000514203 C1QBPQ07021 282 aaKnown RBP18.1■□□□□ 0.49
EPB41L4A-209ENST00000514203 CACNB1Q02641 598 aaPredicted RBP18.09■□□□□ 0.49
EPB41L4A-209ENST00000514203 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
EPB41L4A-209ENST00000514203 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
EPB41L4A-209ENST00000514203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
EPB41L4A-209ENST00000514203 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
EPB41L4A-209ENST00000514203 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
EPB41L4A-209ENST00000514203 SAMD1Q6SPF0 538 aaPredicted RBP17.62■□□□□ 0.41
EPB41L4A-209ENST00000514203 APLP2Q06481 763 aa17.61■□□□□ 0.41
EPB41L4A-209ENST00000514203 ZBTB22O15209 634 aa17.6■□□□□ 0.41
EPB41L4A-209ENST00000514203 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
EPB41L4A-209ENST00000514203 CAPN15O75808 1086 aa17.56■□□□□ 0.4
EPB41L4A-209ENST00000514203 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
EPB41L4A-209ENST00000514203 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
EPB41L4A-209ENST00000514203 DSG3P32926 999 aa17.32■□□□□ 0.36
EPB41L4A-209ENST00000514203 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
EPB41L4A-209ENST00000514203 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
EPB41L4A-209ENST00000514203 ATF5Q9Y2D1 282 aaPredicted RBP17.19■□□□□ 0.34
EPB41L4A-209ENST00000514203 ATXN8OSP0DMR3 200 aa17.18■□□□□ 0.34
EPB41L4A-209ENST00000514203 ABCB7O75027 752 aa17.17■□□□□ 0.34
EPB41L4A-209ENST00000514203 POLA2Q14181 598 aa17.04■□□□□ 0.32
EPB41L4A-209ENST00000514203 ZBTB12Q9Y330 459 aaPredicted RBP16.75■□□□□ 0.27
EPB41L4A-209ENST00000514203 FBLN2P98095 1184 aa16.56■□□□□ 0.24
EPB41L4A-209ENST00000514203 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
EPB41L4A-209ENST00000514203 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
EPB41L4A-209ENST00000514203 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
EPB41L4A-209ENST00000514203 SPDYE2BA6NHP3 402 aa16.27■□□□□ 0.2
EPB41L4A-209ENST00000514203 SPDYE6P0CI01 402 aa16.27■□□□□ 0.2
EPB41L4A-209ENST00000514203 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
EPB41L4A-209ENST00000514203 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
EPB41L4A-209ENST00000514203 ZNF692Q9BU19 519 aaPredicted RBP16.16■□□□□ 0.18
EPB41L4A-209ENST00000514203 REM2Q8IYK8 340 aaPredicted RBP16.09■□□□□ 0.17
EPB41L4A-209ENST00000514203 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
EPB41L4A-209ENST00000514203 CHRDL2Q6WN34 429 aa15.96■□□□□ 0.15
EPB41L4A-209ENST00000514203 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
EPB41L4A-209ENST00000514203 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
EPB41L4A-209ENST00000514203 PITPNM1O00562 1244 aa15.9■□□□□ 0.14
EPB41L4A-209ENST00000514203 SPDYE1Q8NFV5 336 aaPredicted RBP15.87■□□□□ 0.13
EPB41L4A-209ENST00000514203 POTEHQ6S545 545 aa15.83■□□□□ 0.12
EPB41L4A-209ENST00000514203 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
EPB41L4A-209ENST00000514203 FXR2P51116 673 aaKnown RBP eCLIP15.68■□□□□ 0.1
EPB41L4A-209ENST00000514203 PIP4P2Q8N4L2 257 aa15.68■□□□□ 0.1
EPB41L4A-209ENST00000514203 FKBP8Q14318 412 aa15.66■□□□□ 0.1
EPB41L4A-209ENST00000514203 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
EPB41L4A-209ENST00000514203 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
EPB41L4A-209ENST00000514203 PROM2Q8N271 834 aa15.6■□□□□ 0.09
EPB41L4A-209ENST00000514203 PRKAR2AP13861 404 aaKnown RBP15.51■□□□□ 0.07
EPB41L4A-209ENST00000514203 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
EPB41L4A-209ENST00000514203 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
EPB41L4A-209ENST00000514203 HAX1O00165 279 aa15.3■□□□□ 0.04
EPB41L4A-209ENST00000514203 FARP1Q9Y4F1 1045 aaPredicted RBP15.27■□□□□ 0.04
EPB41L4A-209ENST00000514203 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
EPB41L4A-209ENST00000514203 MIER1Q8N108 512 aa15.18■□□□□ 0.02
EPB41L4A-209ENST00000514203 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
EPB41L4A-209ENST00000514203 C19orf67A6NJJ6 358 aa15.14■□□□□ 0.01
EPB41L4A-209ENST00000514203 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
EPB41L4A-209ENST00000514203 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
EPB41L4A-209ENST00000514203 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
EPB41L4A-209ENST00000514203 EVX2Q03828 476 aa15.09■□□□□ 0.01
EPB41L4A-209ENST00000514203 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
EPB41L4A-209ENST00000514203 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
EPB41L4A-209ENST00000514203 ZBTB47Q9UFB7 747 aaPredicted RBP15□□□□□ -0.01
EPB41L4A-209ENST00000514203 VASPP50552 380 aaPredicted RBP14.99□□□□□ -0.01
EPB41L4A-209ENST00000514203 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
EPB41L4A-209ENST00000514203 ZRANB1Q9UGI0 708 aa14.93□□□□□ -0.02
EPB41L4A-209ENST00000514203 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
EPB41L4A-209ENST00000514203 ZNF579Q8NAF0 562 aaKnown RBP14.84□□□□□ -0.03
EPB41L4A-209ENST00000514203 TSPYL2Q9H2G4 693 aaPredicted RBP14.83□□□□□ -0.04
EPB41L4A-209ENST00000514203 GABBR2O75899 941 aa14.81□□□□□ -0.04
EPB41L4A-209ENST00000514203 CLCN6P51797 869 aa14.8□□□□□ -0.04
EPB41L4A-209ENST00000514203 NUBP1P53384 320 aa14.79□□□□□ -0.04
EPB41L4A-209ENST00000514203 RASEFQ8IZ41 740 aa14.79□□□□□ -0.04
EPB41L4A-209ENST00000514203 IFNLR1Q8IU57 520 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms