RNA–Protein interactions for RNA: ENST00000514149.1

KLHL3-213, Transcript of kelch like family member 3, humanhuman

TSL 4

Gene KLHL3, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-213ENST00000514149 AEBP2Q6ZN18 517 aaPredicted RBP31.88■■■□□ 2.69
KLHL3-213ENST00000514149 CHIC1Q5VXU3 224 aa29.98■■■□□ 2.39
KLHL3-213ENST00000514149 SENP3Q9H4L4 574 aaPredicted RBP27.13■■□□□ 1.93
KLHL3-213ENST00000514149 PHF23Q9BUL5 403 aaPredicted RBP26.78■■□□□ 1.88
KLHL3-213ENST00000514149 FOXD1Q16676 465 aa25.38■■□□□ 1.65
KLHL3-213ENST00000514149 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
KLHL3-213ENST00000514149 MSH5O43196 834 aa23.77■■□□□ 1.4
KLHL3-213ENST00000514149 POTEDQ86YR6 584 aa23.7■■□□□ 1.38
KLHL3-213ENST00000514149 PIAS4Q8N2W9 510 aaPredicted RBP23.62■■□□□ 1.37
KLHL3-213ENST00000514149 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
KLHL3-213ENST00000514149 ADRA2BP18089 450 aa23.46■■□□□ 1.35
KLHL3-213ENST00000514149 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
KLHL3-213ENST00000514149 DMRT2Q9Y5R5 561 aa21.51■■□□□ 1.03
KLHL3-213ENST00000514149 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1.01
KLHL3-213ENST00000514149 PPP4R3CPQ6ZMV5 832 aa20.85■□□□□ 0.93
KLHL3-213ENST00000514149 HOXD11P31277 338 aaPredicted RBP20.62■□□□□ 0.89
KLHL3-213ENST00000514149 DCAF8L1A6NGE4 600 aa20.59■□□□□ 0.89
KLHL3-213ENST00000514149 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
KLHL3-213ENST00000514149 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
KLHL3-213ENST00000514149 RNF216Q9NWF9 866 aaPredicted RBP20.38■□□□□ 0.85
KLHL3-213ENST00000514149 RNF39Q9H2S5 420 aa20.31■□□□□ 0.84
KLHL3-213ENST00000514149 C1QBPQ07021 282 aaKnown RBP19.95■□□□□ 0.78
KLHL3-213ENST00000514149 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
KLHL3-213ENST00000514149 NCBP3Q53F19 620 aaKnown RBP19.9■□□□□ 0.78
KLHL3-213ENST00000514149 NPM3O75607 178 aaKnown RBP19.71■□□□□ 0.75
KLHL3-213ENST00000514149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.73
KLHL3-213ENST00000514149 U3KPZ7 1027 aaPredicted RBP19.24■□□□□ 0.67
KLHL3-213ENST00000514149 KCNA4P22459 653 aa19.13■□□□□ 0.65
KLHL3-213ENST00000514149 SPINK5Q9NQ38 1064 aaPredicted RBP19.04■□□□□ 0.64
KLHL3-213ENST00000514149 CAPN15O75808 1086 aa18.95■□□□□ 0.62
KLHL3-213ENST00000514149 DSG3P32926 999 aa18.94■□□□□ 0.62
KLHL3-213ENST00000514149 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
KLHL3-213ENST00000514149 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
KLHL3-213ENST00000514149 ABCB7O75027 752 aa18.54■□□□□ 0.56
KLHL3-213ENST00000514149 APLP2Q06481 763 aa18.52■□□□□ 0.56
KLHL3-213ENST00000514149 ZNF219Q9P2Y4 722 aaPredicted RBP18.52■□□□□ 0.56
KLHL3-213ENST00000514149 POTEHQ6S545 545 aa18.5■□□□□ 0.55
KLHL3-213ENST00000514149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
KLHL3-213ENST00000514149 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
KLHL3-213ENST00000514149 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
KLHL3-213ENST00000514149 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
KLHL3-213ENST00000514149 POLA2Q14181 598 aa18.04■□□□□ 0.48
KLHL3-213ENST00000514149 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
KLHL3-213ENST00000514149 SLC4A1APQ9BWU0 796 aaKnown RBP17.95■□□□□ 0.46
KLHL3-213ENST00000514149 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
KLHL3-213ENST00000514149 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
KLHL3-213ENST00000514149 CHRDL2Q6WN34 429 aa17.76■□□□□ 0.43
KLHL3-213ENST00000514149 ZBTB22O15209 634 aa17.62■□□□□ 0.41
KLHL3-213ENST00000514149 ZBTB12Q9Y330 459 aaPredicted RBP17.59■□□□□ 0.41
KLHL3-213ENST00000514149 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
KLHL3-213ENST00000514149 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
KLHL3-213ENST00000514149 REM2Q8IYK8 340 aaPredicted RBP17.43■□□□□ 0.38
KLHL3-213ENST00000514149 ATXN8OSP0DMR3 200 aa17.32■□□□□ 0.36
KLHL3-213ENST00000514149 PIP4P2Q8N4L2 257 aa17.31■□□□□ 0.36
KLHL3-213ENST00000514149 PITPNM1O00562 1244 aa17.27■□□□□ 0.36
KLHL3-213ENST00000514149 SP7Q8TDD2 431 aaPredicted RBP17.22■□□□□ 0.35
KLHL3-213ENST00000514149 FXR2P51116 673 aaKnown RBP eCLIP17.16■□□□□ 0.34
KLHL3-213ENST00000514149 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
KLHL3-213ENST00000514149 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
KLHL3-213ENST00000514149 FBLN2P98095 1184 aa17.07■□□□□ 0.32
KLHL3-213ENST00000514149 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
KLHL3-213ENST00000514149 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
KLHL3-213ENST00000514149 HAX1O00165 279 aa17.01■□□□□ 0.31
KLHL3-213ENST00000514149 EVX2Q03828 476 aa16.88■□□□□ 0.29
KLHL3-213ENST00000514149 SSUH2Q9Y2M2 353 aa16.86■□□□□ 0.29
KLHL3-213ENST00000514149 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
KLHL3-213ENST00000514149 SPDYE1Q8NFV5 336 aaPredicted RBP16.82■□□□□ 0.28
KLHL3-213ENST00000514149 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
KLHL3-213ENST00000514149 PRKAR2AP13861 404 aaKnown RBP16.79■□□□□ 0.28
KLHL3-213ENST00000514149 C19orf67A6NJJ6 358 aa16.62■□□□□ 0.25
KLHL3-213ENST00000514149 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
KLHL3-213ENST00000514149 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
KLHL3-213ENST00000514149 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
KLHL3-213ENST00000514149 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
KLHL3-213ENST00000514149 GABBR2O75899 941 aa16.43■□□□□ 0.22
KLHL3-213ENST00000514149 FARP1Q9Y4F1 1045 aaPredicted RBP16.28■□□□□ 0.2
KLHL3-213ENST00000514149 CD44P16070 742 aaKnown RBP16.24■□□□□ 0.19
KLHL3-213ENST00000514149 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
KLHL3-213ENST00000514149 LHX8Q68G74 356 aa16.14■□□□□ 0.17
KLHL3-213ENST00000514149 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
KLHL3-213ENST00000514149 CREBZFQ9NS37 354 aa16.1■□□□□ 0.17
KLHL3-213ENST00000514149 SPDYE4A6NLX3 237 aa16.03■□□□□ 0.16
KLHL3-213ENST00000514149 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
KLHL3-213ENST00000514149 CLCN6P51797 869 aa15.99■□□□□ 0.15
KLHL3-213ENST00000514149 ZNF579Q8NAF0 562 aaKnown RBP15.99■□□□□ 0.15
KLHL3-213ENST00000514149 ZRANB1Q9UGI0 708 aa15.97■□□□□ 0.15
KLHL3-213ENST00000514149 DCBLD2Q96PD2 775 aa15.88■□□□□ 0.13
KLHL3-213ENST00000514149 GALR2O43603 387 aaPredicted RBP15.85■□□□□ 0.13
KLHL3-213ENST00000514149 MNX1P50219 401 aaPredicted RBP15.81■□□□□ 0.12
KLHL3-213ENST00000514149 PHF12Q96QT6 1004 aa15.77■□□□□ 0.12
KLHL3-213ENST00000514149 PAK3O75914 559 aaPredicted RBP15.72■□□□□ 0.11
KLHL3-213ENST00000514149 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
KLHL3-213ENST00000514149 PROM2Q8N271 834 aa15.66■□□□□ 0.1
KLHL3-213ENST00000514149 POTEB2H3BUK9 544 aa15.6■□□□□ 0.09
KLHL3-213ENST00000514149 PELP1Q8IZL8 1130 aaKnown RBP15.58■□□□□ 0.08
KLHL3-213ENST00000514149 OTUD5Q96G74 571 aa15.56■□□□□ 0.08
KLHL3-213ENST00000514149 MS4A3Q96HJ5 214 aa15.55■□□□□ 0.08
KLHL3-213ENST00000514149 ASTLQ6HA08 431 aaPredicted RBP15.47■□□□□ 0.07
KLHL3-213ENST00000514149 TSPYL2Q9H2G4 693 aaPredicted RBP15.46■□□□□ 0.07
KLHL3-213ENST00000514149 ATMINO43313 823 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms