RNA–Protein interactions for RNA: ENST00000513993.5

SLC38A9-220, Transcript of solute carrier family 38 member 9, humanhuman

TSL 4

Gene SLC38A9, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-220ENST00000513993 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
SLC38A9-220ENST00000513993 CHIC1Q5VXU3 224 aa27.05■■□□□ 1.92
SLC38A9-220ENST00000513993 PHF23Q9BUL5 403 aaPredicted RBP23.91■■□□□ 1.42
SLC38A9-220ENST00000513993 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
SLC38A9-220ENST00000513993 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
SLC38A9-220ENST00000513993 FOXD1Q16676 465 aa21.3■■□□□ 1
SLC38A9-220ENST00000513993 ADRA2BP18089 450 aa20.98■□□□□ 0.95
SLC38A9-220ENST00000513993 PPP6R1Q9UPN7 881 aa20.96■□□□□ 0.95
SLC38A9-220ENST00000513993 PIAS4Q8N2W9 510 aaPredicted RBP20.22■□□□□ 0.83
SLC38A9-220ENST00000513993 KCNA4P22459 653 aa19.85■□□□□ 0.77
SLC38A9-220ENST00000513993 PPP4R3CPQ6ZMV5 832 aa19.66■□□□□ 0.74
SLC38A9-220ENST00000513993 MSH5O43196 834 aa19.35■□□□□ 0.69
SLC38A9-220ENST00000513993 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
SLC38A9-220ENST00000513993 EHMT2Q96KQ7 1210 aa19.11■□□□□ 0.65
SLC38A9-220ENST00000513993 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
SLC38A9-220ENST00000513993 NPM3O75607 178 aaKnown RBP19.02■□□□□ 0.64
SLC38A9-220ENST00000513993 SLC4A1APQ9BWU0 796 aaKnown RBP18.96■□□□□ 0.63
SLC38A9-220ENST00000513993 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
SLC38A9-220ENST00000513993 MAPK8IP2Q13387 824 aaPredicted RBP18.9■□□□□ 0.62
SLC38A9-220ENST00000513993 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
SLC38A9-220ENST00000513993 RNF216Q9NWF9 866 aaPredicted RBP18.43■□□□□ 0.54
SLC38A9-220ENST00000513993 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
SLC38A9-220ENST00000513993 ZBTB22O15209 634 aa18.29■□□□□ 0.52
SLC38A9-220ENST00000513993 HOXD11P31277 338 aaPredicted RBP18.22■□□□□ 0.51
SLC38A9-220ENST00000513993 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
SLC38A9-220ENST00000513993 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
SLC38A9-220ENST00000513993 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
SLC38A9-220ENST00000513993 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
SLC38A9-220ENST00000513993 MYCNP04198 464 aaPredicted RBP17.52■□□□□ 0.4
SLC38A9-220ENST00000513993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
SLC38A9-220ENST00000513993 ATXN8OSP0DMR3 200 aa17.3■□□□□ 0.36
SLC38A9-220ENST00000513993 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
SLC38A9-220ENST00000513993 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
SLC38A9-220ENST00000513993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
SLC38A9-220ENST00000513993 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
SLC38A9-220ENST00000513993 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
SLC38A9-220ENST00000513993 FKBP8Q14318 412 aa16.79■□□□□ 0.28
SLC38A9-220ENST00000513993 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
SLC38A9-220ENST00000513993 APLP2Q06481 763 aa16.74■□□□□ 0.27
SLC38A9-220ENST00000513993 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
SLC38A9-220ENST00000513993 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
SLC38A9-220ENST00000513993 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
SLC38A9-220ENST00000513993 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
SLC38A9-220ENST00000513993 CAPN15O75808 1086 aa16.5■□□□□ 0.23
SLC38A9-220ENST00000513993 C1QBPQ07021 282 aaKnown RBP16.46■□□□□ 0.23
SLC38A9-220ENST00000513993 POLA2Q14181 598 aa16.4■□□□□ 0.22
SLC38A9-220ENST00000513993 MKRN4PQ13434 485 aaPredicted RBP16.37■□□□□ 0.21
SLC38A9-220ENST00000513993 ABCB7O75027 752 aa16.28■□□□□ 0.2
SLC38A9-220ENST00000513993 FBLN2P98095 1184 aa16.27■□□□□ 0.2
SLC38A9-220ENST00000513993 SPDYE4A6NLX3 237 aa16.23■□□□□ 0.19
SLC38A9-220ENST00000513993 RTN4Q9NQC3 1192 aaKnown RBP16.22■□□□□ 0.19
SLC38A9-220ENST00000513993 AMER1Q5JTC6 1135 aaPredicted RBP16.14■□□□□ 0.17
SLC38A9-220ENST00000513993 DSG3P32926 999 aa16.06■□□□□ 0.16
SLC38A9-220ENST00000513993 ZBTB12Q9Y330 459 aaPredicted RBP16.05■□□□□ 0.16
SLC38A9-220ENST00000513993 PROM2Q8N271 834 aa15.97■□□□□ 0.15
SLC38A9-220ENST00000513993 FBXO3Q9UK99 471 aa15.94■□□□□ 0.14
SLC38A9-220ENST00000513993 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
SLC38A9-220ENST00000513993 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
SLC38A9-220ENST00000513993 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
SLC38A9-220ENST00000513993 VASPP50552 380 aaPredicted RBP15.77■□□□□ 0.12
SLC38A9-220ENST00000513993 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
SLC38A9-220ENST00000513993 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
SLC38A9-220ENST00000513993 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
SLC38A9-220ENST00000513993 SSUH2Q9Y2M2 353 aa15.64■□□□□ 0.09
SLC38A9-220ENST00000513993 IFNLR1Q8IU57 520 aaPredicted RBP15.63■□□□□ 0.09
SLC38A9-220ENST00000513993 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
SLC38A9-220ENST00000513993 SLC24A1O60721 1099 aa15.46■□□□□ 0.07
SLC38A9-220ENST00000513993 STAG3Q9UJ98 1225 aa15.45■□□□□ 0.06
SLC38A9-220ENST00000513993 KLHL34Q8N239 644 aa15.42■□□□□ 0.06
SLC38A9-220ENST00000513993 PLCD3Q8N3E9 789 aa15.39■□□□□ 0.05
SLC38A9-220ENST00000513993 MIER1Q8N108 512 aa15.36■□□□□ 0.05
SLC38A9-220ENST00000513993 SPOCK2Q92563 424 aa15.31■□□□□ 0.04
SLC38A9-220ENST00000513993 PKD2Q13563 968 aa15.3■□□□□ 0.04
SLC38A9-220ENST00000513993 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
SLC38A9-220ENST00000513993 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
SLC38A9-220ENST00000513993 AKT1S1Q96B36 256 aa15.17■□□□□ 0.02
SLC38A9-220ENST00000513993 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
SLC38A9-220ENST00000513993 ECM2O94769 699 aaPredicted RBP15.12■□□□□ 0.01
SLC38A9-220ENST00000513993 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
SLC38A9-220ENST00000513993 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
SLC38A9-220ENST00000513993 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
SLC38A9-220ENST00000513993 ZBTB47Q9UFB7 747 aaPredicted RBP15.08■□□□□ 0
SLC38A9-220ENST00000513993 CIZ1Q9ULV3 898 aaPredicted RBP15.05■□□□□ -0
SLC38A9-220ENST00000513993 PRR29P0C7W0 189 aa15.01□□□□□ -0.01
SLC38A9-220ENST00000513993 RGL2O15211 777 aa14.97□□□□□ -0.01
SLC38A9-220ENST00000513993 PLCB2Q00722 1185 aa14.96□□□□□ -0.01
SLC38A9-220ENST00000513993 CREBZFQ9NS37 354 aa14.94□□□□□ -0.02
SLC38A9-220ENST00000513993 PITPNM1O00562 1244 aa14.91□□□□□ -0.02
SLC38A9-220ENST00000513993 NPM1P06748 294 aaKnown RBP eCLIP14.88□□□□□ -0.03
SLC38A9-220ENST00000513993 NUBP1P53384 320 aa14.88□□□□□ -0.03
SLC38A9-220ENST00000513993 MNX1P50219 401 aaPredicted RBP14.84□□□□□ -0.03
SLC38A9-220ENST00000513993 DCAF8Q5TAQ9 597 aa14.83□□□□□ -0.04
SLC38A9-220ENST00000513993 HAP1P54257 671 aaPredicted RBP14.81□□□□□ -0.04
SLC38A9-220ENST00000513993 GSE1Q14687 1217 aa14.81□□□□□ -0.04
SLC38A9-220ENST00000513993 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
SLC38A9-220ENST00000513993 BBXQ8WY36 941 aaPredicted RBP14.78□□□□□ -0.04
SLC38A9-220ENST00000513993 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.75□□□□□ -0.05
SLC38A9-220ENST00000513993 CHGAP10645 457 aaKnown RBP14.74□□□□□ -0.05
SLC38A9-220ENST00000513993 RASEFQ8IZ41 740 aa14.73□□□□□ -0.05
SLC38A9-220ENST00000513993 FAM212AQ96EL1 285 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms