RNA–Protein interactions for RNA: ENST00000513789.1

ZFYVE16-213, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 3

Gene ZFYVE16, Length 423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-213ENST00000513789 AEBP2Q6ZN18 517 aaPredicted RBP26.99■■□□□ 1.91
ZFYVE16-213ENST00000513789 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
ZFYVE16-213ENST00000513789 PHF23Q9BUL5 403 aaPredicted RBP23.58■■□□□ 1.37
ZFYVE16-213ENST00000513789 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
ZFYVE16-213ENST00000513789 PLPPR3Q6T4P5 718 aa21.88■■□□□ 1.09
ZFYVE16-213ENST00000513789 FOXD1Q16676 465 aa21.14■□□□□ 0.97
ZFYVE16-213ENST00000513789 ADRA2BP18089 450 aa20.67■□□□□ 0.9
ZFYVE16-213ENST00000513789 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
ZFYVE16-213ENST00000513789 PIAS4Q8N2W9 510 aaPredicted RBP20.02■□□□□ 0.8
ZFYVE16-213ENST00000513789 KCNA4P22459 653 aa19.36■□□□□ 0.69
ZFYVE16-213ENST00000513789 PPP4R3CPQ6ZMV5 832 aa19.34■□□□□ 0.69
ZFYVE16-213ENST00000513789 MSH5O43196 834 aa19.31■□□□□ 0.68
ZFYVE16-213ENST00000513789 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
ZFYVE16-213ENST00000513789 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
ZFYVE16-213ENST00000513789 CNKSR2Q8WXI2 1034 aa18.7■□□□□ 0.58
ZFYVE16-213ENST00000513789 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
ZFYVE16-213ENST00000513789 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
ZFYVE16-213ENST00000513789 SLC4A1APQ9BWU0 796 aaKnown RBP18.5■□□□□ 0.55
ZFYVE16-213ENST00000513789 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
ZFYVE16-213ENST00000513789 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
ZFYVE16-213ENST00000513789 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
ZFYVE16-213ENST00000513789 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
ZFYVE16-213ENST00000513789 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
ZFYVE16-213ENST00000513789 CSRNP3Q8WYN3 585 aa18.06■□□□□ 0.48
ZFYVE16-213ENST00000513789 ZBTB22O15209 634 aa17.83■□□□□ 0.44
ZFYVE16-213ENST00000513789 FOXD4L1Q9NU39 408 aa17.69■□□□□ 0.42
ZFYVE16-213ENST00000513789 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
ZFYVE16-213ENST00000513789 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
ZFYVE16-213ENST00000513789 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
ZFYVE16-213ENST00000513789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
ZFYVE16-213ENST00000513789 ATXN8OSP0DMR3 200 aa17.04■□□□□ 0.32
ZFYVE16-213ENST00000513789 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
ZFYVE16-213ENST00000513789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
ZFYVE16-213ENST00000513789 HNRNPUL2Q1KMD3 747 aaKnown RBP16.89■□□□□ 0.29
ZFYVE16-213ENST00000513789 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
ZFYVE16-213ENST00000513789 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
ZFYVE16-213ENST00000513789 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
ZFYVE16-213ENST00000513789 APLP2Q06481 763 aa16.61■□□□□ 0.25
ZFYVE16-213ENST00000513789 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
ZFYVE16-213ENST00000513789 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
ZFYVE16-213ENST00000513789 C1QBPQ07021 282 aaKnown RBP16.42■□□□□ 0.22
ZFYVE16-213ENST00000513789 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
ZFYVE16-213ENST00000513789 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
ZFYVE16-213ENST00000513789 CAPN15O75808 1086 aa16.3■□□□□ 0.2
ZFYVE16-213ENST00000513789 FKBP8Q14318 412 aa16.29■□□□□ 0.2
ZFYVE16-213ENST00000513789 POLA2Q14181 598 aa16.15■□□□□ 0.18
ZFYVE16-213ENST00000513789 MKRN4PQ13434 485 aaPredicted RBP16.07■□□□□ 0.16
ZFYVE16-213ENST00000513789 ABCB7O75027 752 aa16.03■□□□□ 0.16
ZFYVE16-213ENST00000513789 FBLN2P98095 1184 aa16.01■□□□□ 0.15
ZFYVE16-213ENST00000513789 DSG3P32926 999 aa15.94■□□□□ 0.14
ZFYVE16-213ENST00000513789 ZBTB12Q9Y330 459 aaPredicted RBP15.9■□□□□ 0.14
ZFYVE16-213ENST00000513789 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
ZFYVE16-213ENST00000513789 CACNB1Q02641 598 aaPredicted RBP15.87■□□□□ 0.13
ZFYVE16-213ENST00000513789 PROM2Q8N271 834 aa15.69■□□□□ 0.1
ZFYVE16-213ENST00000513789 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
ZFYVE16-213ENST00000513789 FBXO3Q9UK99 471 aa15.58■□□□□ 0.08
ZFYVE16-213ENST00000513789 AMER1Q5JTC6 1135 aaPredicted RBP15.54■□□□□ 0.08
ZFYVE16-213ENST00000513789 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
ZFYVE16-213ENST00000513789 RTN4Q9NQC3 1192 aaKnown RBP15.53■□□□□ 0.08
ZFYVE16-213ENST00000513789 SPDYE2BA6NHP3 402 aa15.51■□□□□ 0.07
ZFYVE16-213ENST00000513789 SPDYE6P0CI01 402 aa15.51■□□□□ 0.07
ZFYVE16-213ENST00000513789 SPDYE2Q495Y8 402 aa15.51■□□□□ 0.07
ZFYVE16-213ENST00000513789 SSUH2Q9Y2M2 353 aa15.45■□□□□ 0.06
ZFYVE16-213ENST00000513789 VASPP50552 380 aaPredicted RBP15.37■□□□□ 0.05
ZFYVE16-213ENST00000513789 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
ZFYVE16-213ENST00000513789 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
ZFYVE16-213ENST00000513789 STAG3Q9UJ98 1225 aa15.2■□□□□ 0.02
ZFYVE16-213ENST00000513789 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
ZFYVE16-213ENST00000513789 AKT1S1Q96B36 256 aa15.07■□□□□ 0
ZFYVE16-213ENST00000513789 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
ZFYVE16-213ENST00000513789 MIER1Q8N108 512 aa15.02■□□□□ -0
ZFYVE16-213ENST00000513789 KLHL34Q8N239 644 aa15.02■□□□□ -0
ZFYVE16-213ENST00000513789 SPDYE1Q8NFV5 336 aaPredicted RBP14.95□□□□□ -0.02
ZFYVE16-213ENST00000513789 SPOCK2Q92563 424 aa14.95□□□□□ -0.02
ZFYVE16-213ENST00000513789 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
ZFYVE16-213ENST00000513789 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
ZFYVE16-213ENST00000513789 CLEC11AQ9Y240 323 aa14.87□□□□□ -0.03
ZFYVE16-213ENST00000513789 PKD2Q13563 968 aa14.86□□□□□ -0.03
ZFYVE16-213ENST00000513789 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
ZFYVE16-213ENST00000513789 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
ZFYVE16-213ENST00000513789 PITPNM1O00562 1244 aa14.76□□□□□ -0.05
ZFYVE16-213ENST00000513789 CREBZFQ9NS37 354 aa14.72□□□□□ -0.05
ZFYVE16-213ENST00000513789 SLC24A1O60721 1099 aa14.68□□□□□ -0.06
ZFYVE16-213ENST00000513789 ECM2O94769 699 aaPredicted RBP14.68□□□□□ -0.06
ZFYVE16-213ENST00000513789 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
ZFYVE16-213ENST00000513789 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
ZFYVE16-213ENST00000513789 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
ZFYVE16-213ENST00000513789 NUBP1P53384 320 aa14.61□□□□□ -0.07
ZFYVE16-213ENST00000513789 RGL2O15211 777 aa14.53□□□□□ -0.08
ZFYVE16-213ENST00000513789 GSE1Q14687 1217 aa14.53□□□□□ -0.08
ZFYVE16-213ENST00000513789 TRIM41Q8WV44 630 aa14.5□□□□□ -0.09
ZFYVE16-213ENST00000513789 DCAF8Q5TAQ9 597 aa14.49□□□□□ -0.09
ZFYVE16-213ENST00000513789 CHADLQ6NUI6 762 aa14.49□□□□□ -0.09
ZFYVE16-213ENST00000513789 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
ZFYVE16-213ENST00000513789 FAM212AQ96EL1 285 aa14.46□□□□□ -0.09
ZFYVE16-213ENST00000513789 RASEFQ8IZ41 740 aa14.45□□□□□ -0.1
ZFYVE16-213ENST00000513789 FXR2P51116 673 aaKnown RBP eCLIP14.4□□□□□ -0.1
ZFYVE16-213ENST00000513789 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
ZFYVE16-213ENST00000513789 PLCB2Q00722 1185 aa14.38□□□□□ -0.11
ZFYVE16-213ENST00000513789 FARP1Q9Y4F1 1045 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms