RNA–Protein interactions for RNA: ENST00000513747.1

GIN1-207, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 3

Gene GIN1, Length 525 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-207ENST00000513747 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
GIN1-207ENST00000513747 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
GIN1-207ENST00000513747 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
GIN1-207ENST00000513747 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
GIN1-207ENST00000513747 FOXD1Q16676 465 aa17.68■□□□□ 0.42
GIN1-207ENST00000513747 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
GIN1-207ENST00000513747 MSH5O43196 834 aa16.58■□□□□ 0.24
GIN1-207ENST00000513747 PIAS4Q8N2W9 510 aaPredicted RBP16.51■□□□□ 0.23
GIN1-207ENST00000513747 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
GIN1-207ENST00000513747 ADRA2BP18089 450 aa16.42■□□□□ 0.22
GIN1-207ENST00000513747 POTEDQ86YR6 584 aa16.32■□□□□ 0.2
GIN1-207ENST00000513747 MAPK8IP2Q13387 824 aaPredicted RBP15.11■□□□□ 0.01
GIN1-207ENST00000513747 SCAF1Q9H7N4 1312 aaKnown RBP15.02■□□□□ -0
GIN1-207ENST00000513747 DMRT2Q9Y5R5 561 aa15.02■□□□□ -0
GIN1-207ENST00000513747 PPP4R3CPQ6ZMV5 832 aa14.68□□□□□ -0.06
GIN1-207ENST00000513747 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
GIN1-207ENST00000513747 HOXD11P31277 338 aaPredicted RBP14.43□□□□□ -0.1
GIN1-207ENST00000513747 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
GIN1-207ENST00000513747 RNF216Q9NWF9 866 aaPredicted RBP14.3□□□□□ -0.12
GIN1-207ENST00000513747 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
GIN1-207ENST00000513747 KCNA4P22459 653 aa14.23□□□□□ -0.13
GIN1-207ENST00000513747 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
GIN1-207ENST00000513747 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
GIN1-207ENST00000513747 NPM3O75607 178 aaKnown RBP13.99□□□□□ -0.17
GIN1-207ENST00000513747 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
GIN1-207ENST00000513747 C1QBPQ07021 282 aaKnown RBP13.92□□□□□ -0.18
GIN1-207ENST00000513747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.21
GIN1-207ENST00000513747 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
GIN1-207ENST00000513747 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
GIN1-207ENST00000513747 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
GIN1-207ENST00000513747 CAPN15O75808 1086 aa13.29□□□□□ -0.28
GIN1-207ENST00000513747 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
GIN1-207ENST00000513747 DSG3P32926 999 aa13.22□□□□□ -0.29
GIN1-207ENST00000513747 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
GIN1-207ENST00000513747 ZBTB22O15209 634 aa13.09□□□□□ -0.31
GIN1-207ENST00000513747 APLP2Q06481 763 aa13.08□□□□□ -0.32
GIN1-207ENST00000513747 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.32
GIN1-207ENST00000513747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.05□□□□□ -0.32
GIN1-207ENST00000513747 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
GIN1-207ENST00000513747 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
GIN1-207ENST00000513747 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
GIN1-207ENST00000513747 ABCB7O75027 752 aa12.97□□□□□ -0.33
GIN1-207ENST00000513747 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
GIN1-207ENST00000513747 CSRNP3Q8WYN3 585 aa12.93□□□□□ -0.34
GIN1-207ENST00000513747 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
GIN1-207ENST00000513747 POTEHQ6S545 545 aa12.78□□□□□ -0.36
GIN1-207ENST00000513747 POLA2Q14181 598 aa12.66□□□□□ -0.38
GIN1-207ENST00000513747 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
GIN1-207ENST00000513747 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
GIN1-207ENST00000513747 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
GIN1-207ENST00000513747 ZBTB12Q9Y330 459 aaPredicted RBP12.41□□□□□ -0.42
GIN1-207ENST00000513747 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
GIN1-207ENST00000513747 AKT1S1Q96B36 256 aa12.31□□□□□ -0.44
GIN1-207ENST00000513747 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
GIN1-207ENST00000513747 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
GIN1-207ENST00000513747 FBLN2P98095 1184 aa12.08□□□□□ -0.48
GIN1-207ENST00000513747 PITPNM1O00562 1244 aa12.06□□□□□ -0.48
GIN1-207ENST00000513747 PIP4P2Q8N4L2 257 aa12.06□□□□□ -0.48
GIN1-207ENST00000513747 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
GIN1-207ENST00000513747 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
GIN1-207ENST00000513747 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
GIN1-207ENST00000513747 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
GIN1-207ENST00000513747 FXR2P51116 673 aaKnown RBP eCLIP11.97□□□□□ -0.49
GIN1-207ENST00000513747 SP7Q8TDD2 431 aaPredicted RBP11.94□□□□□ -0.5
GIN1-207ENST00000513747 HAX1O00165 279 aa11.87□□□□□ -0.51
GIN1-207ENST00000513747 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
GIN1-207ENST00000513747 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
GIN1-207ENST00000513747 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
GIN1-207ENST00000513747 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
GIN1-207ENST00000513747 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
GIN1-207ENST00000513747 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
GIN1-207ENST00000513747 FKBP8Q14318 412 aa11.76□□□□□ -0.53
GIN1-207ENST00000513747 EVX2Q03828 476 aa11.7□□□□□ -0.54
GIN1-207ENST00000513747 PABPN1Q86U42 306 aaKnown RBP eCLIP11.69□□□□□ -0.54
GIN1-207ENST00000513747 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
GIN1-207ENST00000513747 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
GIN1-207ENST00000513747 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
GIN1-207ENST00000513747 GABBR2O75899 941 aa11.44□□□□□ -0.58
GIN1-207ENST00000513747 PROM2Q8N271 834 aa11.44□□□□□ -0.58
GIN1-207ENST00000513747 FARP1Q9Y4F1 1045 aaPredicted RBP11.42□□□□□ -0.58
GIN1-207ENST00000513747 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
GIN1-207ENST00000513747 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
GIN1-207ENST00000513747 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
GIN1-207ENST00000513747 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
GIN1-207ENST00000513747 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
GIN1-207ENST00000513747 CLCN6P51797 869 aa11.23□□□□□ -0.61
GIN1-207ENST00000513747 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.61
GIN1-207ENST00000513747 POTEIP0CG38 1075 aa11.2□□□□□ -0.62
GIN1-207ENST00000513747 LHX8Q68G74 356 aa11.2□□□□□ -0.62
GIN1-207ENST00000513747 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
GIN1-207ENST00000513747 ZNF579Q8NAF0 562 aaKnown RBP11.19□□□□□ -0.62
GIN1-207ENST00000513747 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
GIN1-207ENST00000513747 MIER1Q8N108 512 aa11.17□□□□□ -0.62
GIN1-207ENST00000513747 VASPP50552 380 aaPredicted RBP11.16□□□□□ -0.62
GIN1-207ENST00000513747 DCBLD2Q96PD2 775 aa11.12□□□□□ -0.63
GIN1-207ENST00000513747 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
GIN1-207ENST00000513747 PLEKHG5O94827 1062 aa11.1□□□□□ -0.63
GIN1-207ENST00000513747 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
GIN1-207ENST00000513747 MNX1P50219 401 aaPredicted RBP11.09□□□□□ -0.63
GIN1-207ENST00000513747 GALR2O43603 387 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms