RNA–Protein interactions for RNA: ENST00000513593.1

RUFY3-211, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 356 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-211ENST00000513593 AEBP2Q6ZN18 517 aaPredicted RBP15.49■□□□□ 0.07
RUFY3-211ENST00000513593 CHIC1Q5VXU3 224 aa15.25■□□□□ 0.03
RUFY3-211ENST00000513593 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
RUFY3-211ENST00000513593 SENP3Q9H4L4 574 aaPredicted RBP13.04□□□□□ -0.32
RUFY3-211ENST00000513593 PLPPR3Q6T4P5 718 aa12.43□□□□□ -0.42
RUFY3-211ENST00000513593 FOXD1Q16676 465 aa12.14□□□□□ -0.47
RUFY3-211ENST00000513593 PPP6R1Q9UPN7 881 aa11.84□□□□□ -0.51
RUFY3-211ENST00000513593 ADRA2BP18089 450 aa11.82□□□□□ -0.52
RUFY3-211ENST00000513593 PIAS4Q8N2W9 510 aaPredicted RBP11.45□□□□□ -0.58
RUFY3-211ENST00000513593 MSH5O43196 834 aa11.07□□□□□ -0.64
RUFY3-211ENST00000513593 PPP4R3CPQ6ZMV5 832 aa11□□□□□ -0.65
RUFY3-211ENST00000513593 KCNA4P22459 653 aa10.96□□□□□ -0.65
RUFY3-211ENST00000513593 SCAF1Q9H7N4 1312 aaKnown RBP10.74□□□□□ -0.69
RUFY3-211ENST00000513593 NCBP3Q53F19 620 aaKnown RBP10.71□□□□□ -0.69
RUFY3-211ENST00000513593 MAPK8IP2Q13387 824 aaPredicted RBP10.69□□□□□ -0.7
RUFY3-211ENST00000513593 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
RUFY3-211ENST00000513593 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
RUFY3-211ENST00000513593 DMRT2Q9Y5R5 561 aa10.46□□□□□ -0.73
RUFY3-211ENST00000513593 SLC4A1APQ9BWU0 796 aaKnown RBP10.43□□□□□ -0.74
RUFY3-211ENST00000513593 RNF216Q9NWF9 866 aaPredicted RBP10.39□□□□□ -0.75
RUFY3-211ENST00000513593 EHMT2Q96KQ7 1210 aa10.35□□□□□ -0.75
RUFY3-211ENST00000513593 HOXD11P31277 338 aaPredicted RBP10.32□□□□□ -0.76
RUFY3-211ENST00000513593 DNAJC5BQ9UF47 199 aa10.26□□□□□ -0.77
RUFY3-211ENST00000513593 CSRNP3Q8WYN3 585 aa10.18□□□□□ -0.78
RUFY3-211ENST00000513593 ZBTB22O15209 634 aa10.11□□□□□ -0.79
RUFY3-211ENST00000513593 SLC4A2P04920 1241 aa10□□□□□ -0.81
RUFY3-211ENST00000513593 FOXD4L1Q9NU39 408 aa10□□□□□ -0.81
RUFY3-211ENST00000513593 DCAF8L1A6NGE4 600 aa9.98□□□□□ -0.81
RUFY3-211ENST00000513593 POTEDQ86YR6 584 aa9.83□□□□□ -0.84
RUFY3-211ENST00000513593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.8□□□□□ -0.84
RUFY3-211ENST00000513593 MYCNP04198 464 aaPredicted RBP9.76□□□□□ -0.85
RUFY3-211ENST00000513593 U3KPZ7 1027 aaPredicted RBP9.7□□□□□ -0.86
RUFY3-211ENST00000513593 ATXN8OSP0DMR3 200 aa9.62□□□□□ -0.87
RUFY3-211ENST00000513593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.57□□□□□ -0.88
RUFY3-211ENST00000513593 HNRNPUL2Q1KMD3 747 aaKnown RBP9.57□□□□□ -0.88
RUFY3-211ENST00000513593 SAMD1Q6SPF0 538 aaPredicted RBP9.56□□□□□ -0.88
RUFY3-211ENST00000513593 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
RUFY3-211ENST00000513593 RNF39Q9H2S5 420 aa9.53□□□□□ -0.88
RUFY3-211ENST00000513593 APLP2Q06481 763 aa9.41□□□□□ -0.9
RUFY3-211ENST00000513593 C1QBPQ07021 282 aaKnown RBP9.4□□□□□ -0.9
RUFY3-211ENST00000513593 SPINK5Q9NQ38 1064 aaPredicted RBP9.4□□□□□ -0.9
RUFY3-211ENST00000513593 ZNF219Q9P2Y4 722 aaPredicted RBP9.35□□□□□ -0.91
RUFY3-211ENST00000513593 CAPN15O75808 1086 aa9.31□□□□□ -0.92
RUFY3-211ENST00000513593 TRHP20396 242 aaPredicted RBP9.31□□□□□ -0.92
RUFY3-211ENST00000513593 POLA2Q14181 598 aa9.22□□□□□ -0.93
RUFY3-211ENST00000513593 ABCB7O75027 752 aa9.16□□□□□ -0.94
RUFY3-211ENST00000513593 FKBP8Q14318 412 aa9.16□□□□□ -0.94
RUFY3-211ENST00000513593 MKRN4PQ13434 485 aaPredicted RBP9.15□□□□□ -0.94
RUFY3-211ENST00000513593 DSG3P32926 999 aa9.14□□□□□ -0.95
RUFY3-211ENST00000513593 CACNB1Q02641 598 aaPredicted RBP9.14□□□□□ -0.95
RUFY3-211ENST00000513593 FBLN2P98095 1184 aa9.06□□□□□ -0.96
RUFY3-211ENST00000513593 ZBTB12Q9Y330 459 aaPredicted RBP9.02□□□□□ -0.97
RUFY3-211ENST00000513593 SPDYE4A6NLX3 237 aa8.98□□□□□ -0.97
RUFY3-211ENST00000513593 OSCARQ8IYS5 282 aa8.89□□□□□ -0.99
RUFY3-211ENST00000513593 PROM2Q8N271 834 aa8.88□□□□□ -0.99
RUFY3-211ENST00000513593 ZNF692Q9BU19 519 aaPredicted RBP8.82□□□□□ -1
RUFY3-211ENST00000513593 SPDYE2BA6NHP3 402 aa8.81□□□□□ -1
RUFY3-211ENST00000513593 SPDYE6P0CI01 402 aa8.81□□□□□ -1
RUFY3-211ENST00000513593 SPDYE2Q495Y8 402 aa8.81□□□□□ -1
RUFY3-211ENST00000513593 SSUH2Q9Y2M2 353 aa8.78□□□□□ -1
RUFY3-211ENST00000513593 FBXO3Q9UK99 471 aa8.74□□□□□ -1.01
RUFY3-211ENST00000513593 PABPN1Q86U42 306 aaKnown RBP eCLIP8.72□□□□□ -1.01
RUFY3-211ENST00000513593 VASPP50552 380 aaPredicted RBP8.65□□□□□ -1.02
RUFY3-211ENST00000513593 RTN4Q9NQC3 1192 aaKnown RBP8.65□□□□□ -1.02
RUFY3-211ENST00000513593 RBM42Q9BTD8 480 aaKnown RBP8.64□□□□□ -1.03
RUFY3-211ENST00000513593 AMER1Q5JTC6 1135 aaPredicted RBP8.61□□□□□ -1.03
RUFY3-211ENST00000513593 IFNLR1Q8IU57 520 aaPredicted RBP8.59□□□□□ -1.03
RUFY3-211ENST00000513593 AKT1S1Q96B36 256 aa8.59□□□□□ -1.03
RUFY3-211ENST00000513593 STAG3Q9UJ98 1225 aa8.57□□□□□ -1.04
RUFY3-211ENST00000513593 REM2Q8IYK8 340 aaPredicted RBP8.54□□□□□ -1.04
RUFY3-211ENST00000513593 MIER1Q8N108 512 aa8.5□□□□□ -1.05
RUFY3-211ENST00000513593 SPDYE1Q8NFV5 336 aaPredicted RBP8.5□□□□□ -1.05
RUFY3-211ENST00000513593 PLCD3Q8N3E9 789 aa8.48□□□□□ -1.05
RUFY3-211ENST00000513593 CLEC11AQ9Y240 323 aa8.48□□□□□ -1.05
RUFY3-211ENST00000513593 KLHL34Q8N239 644 aa8.45□□□□□ -1.06
RUFY3-211ENST00000513593 PITPNM1O00562 1244 aa8.44□□□□□ -1.06
RUFY3-211ENST00000513593 PRR29P0C7W0 189 aa8.42□□□□□ -1.06
RUFY3-211ENST00000513593 SPOCK2Q92563 424 aa8.41□□□□□ -1.06
RUFY3-211ENST00000513593 PLEKHG5O94827 1062 aa8.38□□□□□ -1.07
RUFY3-211ENST00000513593 CREBZFQ9NS37 354 aa8.38□□□□□ -1.07
RUFY3-211ENST00000513593 PKD2Q13563 968 aa8.36□□□□□ -1.07
RUFY3-211ENST00000513593 ZBTB47Q9UFB7 747 aaPredicted RBP8.35□□□□□ -1.07
RUFY3-211ENST00000513593 MNX1P50219 401 aaPredicted RBP8.34□□□□□ -1.07
RUFY3-211ENST00000513593 NUBP1P53384 320 aa8.28□□□□□ -1.08
RUFY3-211ENST00000513593 CHADLQ6NUI6 762 aa8.28□□□□□ -1.08
RUFY3-211ENST00000513593 CHRDL2Q6WN34 429 aa8.26□□□□□ -1.09
RUFY3-211ENST00000513593 FXR2P51116 673 aaKnown RBP eCLIP8.25□□□□□ -1.09
RUFY3-211ENST00000513593 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
RUFY3-211ENST00000513593 ECM2O94769 699 aaPredicted RBP8.24□□□□□ -1.09
RUFY3-211ENST00000513593 PRKAR2AP13861 404 aaKnown RBP8.23□□□□□ -1.09
RUFY3-211ENST00000513593 RASEFQ8IZ41 740 aa8.21□□□□□ -1.1
RUFY3-211ENST00000513593 PIP4P2Q8N4L2 257 aa8.2□□□□□ -1.1
RUFY3-211ENST00000513593 FARP1Q9Y4F1 1045 aaPredicted RBP8.2□□□□□ -1.1
RUFY3-211ENST00000513593 RGL2O15211 777 aa8.19□□□□□ -1.1
RUFY3-211ENST00000513593 GSE1Q14687 1217 aa8.19□□□□□ -1.1
RUFY3-211ENST00000513593 DCAF8Q5TAQ9 597 aa8.19□□□□□ -1.1
RUFY3-211ENST00000513593 NPM1P06748 294 aaKnown RBP eCLIP8.18□□□□□ -1.1
RUFY3-211ENST00000513593 DCAF8L2P0C7V8 631 aa8.17□□□□□ -1.1
RUFY3-211ENST00000513593 FAM212AQ96EL1 285 aa8.17□□□□□ -1.1
RUFY3-211ENST00000513593 TRIM41Q8WV44 630 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms