RNA–Protein interactions for RNA: ENST00000513344.1

USP45-213, Transcript of ubiquitin specific peptidase 45, humanhuman

TSL 3

Gene USP45, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP45-213ENST00000513344 AEBP2Q6ZN18 517 aaPredicted RBP29.7■■■□□ 2.35
USP45-213ENST00000513344 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
USP45-213ENST00000513344 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
USP45-213ENST00000513344 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
USP45-213ENST00000513344 FOXD1Q16676 465 aa23.57■■□□□ 1.36
USP45-213ENST00000513344 PLPPR3Q6T4P5 718 aa22.85■■□□□ 1.25
USP45-213ENST00000513344 ADRA2BP18089 450 aa22.23■■□□□ 1.15
USP45-213ENST00000513344 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
USP45-213ENST00000513344 PIAS4Q8N2W9 510 aaPredicted RBP22.16■■□□□ 1.14
USP45-213ENST00000513344 MSH5O43196 834 aa21.97■■□□□ 1.11
USP45-213ENST00000513344 POTEDQ86YR6 584 aa21.06■□□□□ 0.96
USP45-213ENST00000513344 MAPK8IP2Q13387 824 aaPredicted RBP20.35■□□□□ 0.85
USP45-213ENST00000513344 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
USP45-213ENST00000513344 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
USP45-213ENST00000513344 DMRT2Q9Y5R5 561 aa20.08■□□□□ 0.81
USP45-213ENST00000513344 CNKSR2Q8WXI2 1034 aa19.63■□□□□ 0.73
USP45-213ENST00000513344 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
USP45-213ENST00000513344 NCBP3Q53F19 620 aaKnown RBP19.41■□□□□ 0.7
USP45-213ENST00000513344 HOXD11P31277 338 aaPredicted RBP19.4■□□□□ 0.7
USP45-213ENST00000513344 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
USP45-213ENST00000513344 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
USP45-213ENST00000513344 KCNA4P22459 653 aa18.95■□□□□ 0.62
USP45-213ENST00000513344 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
USP45-213ENST00000513344 RNF39Q9H2S5 420 aa18.74■□□□□ 0.59
USP45-213ENST00000513344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.58
USP45-213ENST00000513344 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
USP45-213ENST00000513344 C1QBPQ07021 282 aaKnown RBP18.49■□□□□ 0.55
USP45-213ENST00000513344 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
USP45-213ENST00000513344 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
USP45-213ENST00000513344 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
USP45-213ENST00000513344 CAPN15O75808 1086 aa17.94■□□□□ 0.46
USP45-213ENST00000513344 SPINK5Q9NQ38 1064 aaPredicted RBP17.91■□□□□ 0.46
USP45-213ENST00000513344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
USP45-213ENST00000513344 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
USP45-213ENST00000513344 APLP2Q06481 763 aa17.75■□□□□ 0.43
USP45-213ENST00000513344 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
USP45-213ENST00000513344 SAMD1Q6SPF0 538 aaPredicted RBP17.68■□□□□ 0.42
USP45-213ENST00000513344 MYCNP04198 464 aaPredicted RBP17.65■□□□□ 0.42
USP45-213ENST00000513344 DSG3P32926 999 aa17.65■□□□□ 0.42
USP45-213ENST00000513344 FOXD4L1Q9NU39 408 aa17.59■□□□□ 0.41
USP45-213ENST00000513344 ZNF219Q9P2Y4 722 aaPredicted RBP17.59■□□□□ 0.41
USP45-213ENST00000513344 ABCB7O75027 752 aa17.55■□□□□ 0.4
USP45-213ENST00000513344 ZBTB22O15209 634 aa17.37■□□□□ 0.37
USP45-213ENST00000513344 POLA2Q14181 598 aa17.24■□□□□ 0.35
USP45-213ENST00000513344 ATF5Q9Y2D1 282 aaPredicted RBP17.23■□□□□ 0.35
USP45-213ENST00000513344 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
USP45-213ENST00000513344 RBM42Q9BTD8 480 aaKnown RBP16.87■□□□□ 0.29
USP45-213ENST00000513344 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
USP45-213ENST00000513344 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
USP45-213ENST00000513344 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
USP45-213ENST00000513344 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
USP45-213ENST00000513344 FBLN2P98095 1184 aa16.61■□□□□ 0.25
USP45-213ENST00000513344 POTEHQ6S545 545 aa16.58■□□□□ 0.24
USP45-213ENST00000513344 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
USP45-213ENST00000513344 CHRDL2Q6WN34 429 aa16.42■□□□□ 0.22
USP45-213ENST00000513344 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
USP45-213ENST00000513344 REM2Q8IYK8 340 aaPredicted RBP16.38■□□□□ 0.21
USP45-213ENST00000513344 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
USP45-213ENST00000513344 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
USP45-213ENST00000513344 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
USP45-213ENST00000513344 ZNF692Q9BU19 519 aaPredicted RBP16.27■□□□□ 0.2
USP45-213ENST00000513344 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
USP45-213ENST00000513344 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
USP45-213ENST00000513344 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
USP45-213ENST00000513344 PIP4P2Q8N4L2 257 aa16.07■□□□□ 0.16
USP45-213ENST00000513344 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
USP45-213ENST00000513344 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
USP45-213ENST00000513344 FXR2P51116 673 aaKnown RBP eCLIP15.96■□□□□ 0.15
USP45-213ENST00000513344 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
USP45-213ENST00000513344 PRR29P0C7W0 189 aa15.83■□□□□ 0.12
USP45-213ENST00000513344 PRKAR2AP13861 404 aaKnown RBP15.83■□□□□ 0.12
USP45-213ENST00000513344 HAX1O00165 279 aa15.82■□□□□ 0.12
USP45-213ENST00000513344 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
USP45-213ENST00000513344 SP7Q8TDD2 431 aaPredicted RBP15.64■□□□□ 0.09
USP45-213ENST00000513344 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
USP45-213ENST00000513344 EVX2Q03828 476 aa15.54■□□□□ 0.08
USP45-213ENST00000513344 FARP1Q9Y4F1 1045 aaPredicted RBP15.46■□□□□ 0.07
USP45-213ENST00000513344 C19orf67A6NJJ6 358 aa15.44■□□□□ 0.06
USP45-213ENST00000513344 CREBZFQ9NS37 354 aa15.4■□□□□ 0.06
USP45-213ENST00000513344 CD44P16070 742 aaKnown RBP15.34■□□□□ 0.05
USP45-213ENST00000513344 FKBP8Q14318 412 aa15.32■□□□□ 0.04
USP45-213ENST00000513344 PROM2Q8N271 834 aa15.31■□□□□ 0.04
USP45-213ENST00000513344 GABBR2O75899 941 aa15.22■□□□□ 0.03
USP45-213ENST00000513344 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
USP45-213ENST00000513344 ZRANB1Q9UGI0 708 aa15.19■□□□□ 0.02
USP45-213ENST00000513344 MIER1Q8N108 512 aa15.16■□□□□ 0.02
USP45-213ENST00000513344 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
USP45-213ENST00000513344 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
USP45-213ENST00000513344 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
USP45-213ENST00000513344 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
USP45-213ENST00000513344 ZNF579Q8NAF0 562 aaKnown RBP15.03■□□□□ -0
USP45-213ENST00000513344 TSPYL2Q9H2G4 693 aaPredicted RBP14.99□□□□□ -0.01
USP45-213ENST00000513344 PHF12Q96QT6 1004 aa14.98□□□□□ -0.01
USP45-213ENST00000513344 CLCN6P51797 869 aa14.97□□□□□ -0.01
USP45-213ENST00000513344 DCBLD2Q96PD2 775 aa14.94□□□□□ -0.02
USP45-213ENST00000513344 GALR2O43603 387 aaPredicted RBP14.9□□□□□ -0.02
USP45-213ENST00000513344 FBXO3Q9UK99 471 aa14.9□□□□□ -0.02
USP45-213ENST00000513344 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
USP45-213ENST00000513344 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
USP45-213ENST00000513344 RASEFQ8IZ41 740 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms