RNA–Protein interactions for RNA: ENST00000513331.1

GFM2-208, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 2

Gene GFM2, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-208ENST00000513331 AEBP2Q6ZN18 517 aaPredicted RBP27.49■■□□□ 1.99
GFM2-208ENST00000513331 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
GFM2-208ENST00000513331 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
GFM2-208ENST00000513331 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
GFM2-208ENST00000513331 FOXD1Q16676 465 aa22.01■■□□□ 1.11
GFM2-208ENST00000513331 POTEDQ86YR6 584 aa21.19■□□□□ 0.98
GFM2-208ENST00000513331 MSH5O43196 834 aa20.81■□□□□ 0.92
GFM2-208ENST00000513331 PIAS4Q8N2W9 510 aaPredicted RBP20.42■□□□□ 0.86
GFM2-208ENST00000513331 PLPPR3Q6T4P5 718 aa20.23■□□□□ 0.83
GFM2-208ENST00000513331 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
GFM2-208ENST00000513331 ADRA2BP18089 450 aa20.06■□□□□ 0.8
GFM2-208ENST00000513331 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
GFM2-208ENST00000513331 MAPK8IP2Q13387 824 aaPredicted RBP18.58■□□□□ 0.56
GFM2-208ENST00000513331 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
GFM2-208ENST00000513331 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
GFM2-208ENST00000513331 DCAF8L1A6NGE4 600 aa17.8■□□□□ 0.44
GFM2-208ENST00000513331 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
GFM2-208ENST00000513331 RNF39Q9H2S5 420 aa17.71■□□□□ 0.43
GFM2-208ENST00000513331 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
GFM2-208ENST00000513331 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
GFM2-208ENST00000513331 C1QBPQ07021 282 aaKnown RBP17.44■□□□□ 0.38
GFM2-208ENST00000513331 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
GFM2-208ENST00000513331 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
GFM2-208ENST00000513331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
GFM2-208ENST00000513331 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
GFM2-208ENST00000513331 NPM3O75607 178 aaKnown RBP16.57■□□□□ 0.24
GFM2-208ENST00000513331 POTEHQ6S545 545 aa16.51■□□□□ 0.23
GFM2-208ENST00000513331 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
GFM2-208ENST00000513331 DSG3P32926 999 aa16.4■□□□□ 0.22
GFM2-208ENST00000513331 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
GFM2-208ENST00000513331 CAPN15O75808 1086 aa16.34■□□□□ 0.21
GFM2-208ENST00000513331 KCNA4P22459 653 aa16.28■□□□□ 0.2
GFM2-208ENST00000513331 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
GFM2-208ENST00000513331 APLP2Q06481 763 aa15.96■□□□□ 0.15
GFM2-208ENST00000513331 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
GFM2-208ENST00000513331 ZNF219Q9P2Y4 722 aaPredicted RBP15.93■□□□□ 0.14
GFM2-208ENST00000513331 ABCB7O75027 752 aa15.9■□□□□ 0.14
GFM2-208ENST00000513331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
GFM2-208ENST00000513331 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
GFM2-208ENST00000513331 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
GFM2-208ENST00000513331 RBM42Q9BTD8 480 aaKnown RBP15.67■□□□□ 0.1
GFM2-208ENST00000513331 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
GFM2-208ENST00000513331 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
GFM2-208ENST00000513331 POLA2Q14181 598 aa15.43■□□□□ 0.06
GFM2-208ENST00000513331 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
GFM2-208ENST00000513331 SP7Q8TDD2 431 aaPredicted RBP15.23■□□□□ 0.03
GFM2-208ENST00000513331 AKT1S1Q96B36 256 aa15.21■□□□□ 0.03
GFM2-208ENST00000513331 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
GFM2-208ENST00000513331 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
GFM2-208ENST00000513331 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
GFM2-208ENST00000513331 PIP4P2Q8N4L2 257 aa15.04■□□□□ -0
GFM2-208ENST00000513331 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
GFM2-208ENST00000513331 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
GFM2-208ENST00000513331 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
GFM2-208ENST00000513331 ZBTB22O15209 634 aa14.94□□□□□ -0.02
GFM2-208ENST00000513331 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
GFM2-208ENST00000513331 HAX1O00165 279 aa14.91□□□□□ -0.02
GFM2-208ENST00000513331 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
GFM2-208ENST00000513331 PITPNM1O00562 1244 aa14.88□□□□□ -0.03
GFM2-208ENST00000513331 EVX2Q03828 476 aa14.68□□□□□ -0.06
GFM2-208ENST00000513331 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.08
GFM2-208ENST00000513331 SPDYE6P0CI01 402 aa14.58□□□□□ -0.08
GFM2-208ENST00000513331 SPDYE2Q495Y8 402 aa14.58□□□□□ -0.08
GFM2-208ENST00000513331 ATXN8OSP0DMR3 200 aa14.53□□□□□ -0.08
GFM2-208ENST00000513331 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
GFM2-208ENST00000513331 FBLN2P98095 1184 aa14.48□□□□□ -0.09
GFM2-208ENST00000513331 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
GFM2-208ENST00000513331 C19orf67A6NJJ6 358 aa14.42□□□□□ -0.1
GFM2-208ENST00000513331 CLEC11AQ9Y240 323 aa14.42□□□□□ -0.1
GFM2-208ENST00000513331 GABBR2O75899 941 aa14.34□□□□□ -0.11
GFM2-208ENST00000513331 SSUH2Q9Y2M2 353 aa14.32□□□□□ -0.12
GFM2-208ENST00000513331 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
GFM2-208ENST00000513331 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
GFM2-208ENST00000513331 LHX8Q68G74 356 aa14.28□□□□□ -0.12
GFM2-208ENST00000513331 CHADLQ6NUI6 762 aa14.2□□□□□ -0.14
GFM2-208ENST00000513331 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
GFM2-208ENST00000513331 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
GFM2-208ENST00000513331 POTEIP0CG38 1075 aa14.02□□□□□ -0.17
GFM2-208ENST00000513331 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
GFM2-208ENST00000513331 CLCN6P51797 869 aa13.99□□□□□ -0.17
GFM2-208ENST00000513331 FARP1Q9Y4F1 1045 aaPredicted RBP13.96□□□□□ -0.17
GFM2-208ENST00000513331 DCBLD2Q96PD2 775 aa13.83□□□□□ -0.2
GFM2-208ENST00000513331 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
GFM2-208ENST00000513331 PLSCR2Q9NRY7 297 aa13.76□□□□□ -0.21
GFM2-208ENST00000513331 ZRANB1Q9UGI0 708 aa13.72□□□□□ -0.21
GFM2-208ENST00000513331 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
GFM2-208ENST00000513331 GALR2O43603 387 aaPredicted RBP13.62□□□□□ -0.23
GFM2-208ENST00000513331 OTUD5Q96G74 571 aa13.61□□□□□ -0.23
GFM2-208ENST00000513331 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
GFM2-208ENST00000513331 POTEB2H3BUK9 544 aa13.55□□□□□ -0.24
GFM2-208ENST00000513331 FKBP8Q14318 412 aa13.54□□□□□ -0.24
GFM2-208ENST00000513331 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
GFM2-208ENST00000513331 POTEMA6NI47 508 aa13.46□□□□□ -0.25
GFM2-208ENST00000513331 SPDYE4A6NLX3 237 aa13.46□□□□□ -0.25
GFM2-208ENST00000513331 PHF12Q96QT6 1004 aa13.46□□□□□ -0.25
GFM2-208ENST00000513331 PELP1Q8IZL8 1130 aaKnown RBP13.42□□□□□ -0.26
GFM2-208ENST00000513331 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
GFM2-208ENST00000513331 POTEGQ6S5H5 508 aa13.4□□□□□ -0.26
GFM2-208ENST00000513331 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
GFM2-208ENST00000513331 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms