RNA–Protein interactions for RNA: ENST00000513275.5

SLC38A9-219, Transcript of solute carrier family 38 member 9, humanhuman

TSL 4

Gene SLC38A9, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-219ENST00000513275 AEBP2Q6ZN18 517 aaPredicted RBP23.31■■□□□ 1.32
SLC38A9-219ENST00000513275 CHIC1Q5VXU3 224 aa22.06■■□□□ 1.12
SLC38A9-219ENST00000513275 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
SLC38A9-219ENST00000513275 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
SLC38A9-219ENST00000513275 FOXD1Q16676 465 aa18.61■□□□□ 0.57
SLC38A9-219ENST00000513275 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
SLC38A9-219ENST00000513275 MSH5O43196 834 aa17.59■□□□□ 0.41
SLC38A9-219ENST00000513275 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
SLC38A9-219ENST00000513275 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
SLC38A9-219ENST00000513275 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
SLC38A9-219ENST00000513275 ADRA2BP18089 450 aa17.2■□□□□ 0.34
SLC38A9-219ENST00000513275 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
SLC38A9-219ENST00000513275 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
SLC38A9-219ENST00000513275 MAPK8IP2Q13387 824 aaPredicted RBP15.81■□□□□ 0.12
SLC38A9-219ENST00000513275 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
SLC38A9-219ENST00000513275 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
SLC38A9-219ENST00000513275 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
SLC38A9-219ENST00000513275 CACNB1Q02641 598 aaPredicted RBP15.17■□□□□ 0.02
SLC38A9-219ENST00000513275 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
SLC38A9-219ENST00000513275 RNF216Q9NWF9 866 aaPredicted RBP15.06■□□□□ 0
SLC38A9-219ENST00000513275 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
SLC38A9-219ENST00000513275 NCBP3Q53F19 620 aaKnown RBP14.83□□□□□ -0.04
SLC38A9-219ENST00000513275 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
SLC38A9-219ENST00000513275 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
SLC38A9-219ENST00000513275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.52□□□□□ -0.09
SLC38A9-219ENST00000513275 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
SLC38A9-219ENST00000513275 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
SLC38A9-219ENST00000513275 KCNA4P22459 653 aa14.07□□□□□ -0.16
SLC38A9-219ENST00000513275 CAPN15O75808 1086 aa14.02□□□□□ -0.17
SLC38A9-219ENST00000513275 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
SLC38A9-219ENST00000513275 DSG3P32926 999 aa13.92□□□□□ -0.18
SLC38A9-219ENST00000513275 APLP2Q06481 763 aa13.9□□□□□ -0.18
SLC38A9-219ENST00000513275 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
SLC38A9-219ENST00000513275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
SLC38A9-219ENST00000513275 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
SLC38A9-219ENST00000513275 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
SLC38A9-219ENST00000513275 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
SLC38A9-219ENST00000513275 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
SLC38A9-219ENST00000513275 ABCB7O75027 752 aa13.63□□□□□ -0.23
SLC38A9-219ENST00000513275 POTEHQ6S545 545 aa13.59□□□□□ -0.23
SLC38A9-219ENST00000513275 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
SLC38A9-219ENST00000513275 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
SLC38A9-219ENST00000513275 SLC4A1APQ9BWU0 796 aaKnown RBP13.32□□□□□ -0.28
SLC38A9-219ENST00000513275 POLA2Q14181 598 aa13.31□□□□□ -0.28
SLC38A9-219ENST00000513275 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
SLC38A9-219ENST00000513275 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
SLC38A9-219ENST00000513275 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
SLC38A9-219ENST00000513275 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
SLC38A9-219ENST00000513275 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
SLC38A9-219ENST00000513275 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
SLC38A9-219ENST00000513275 OSCARQ8IYS5 282 aa12.9□□□□□ -0.34
SLC38A9-219ENST00000513275 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
SLC38A9-219ENST00000513275 ZBTB22O15209 634 aa12.88□□□□□ -0.35
SLC38A9-219ENST00000513275 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
SLC38A9-219ENST00000513275 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
SLC38A9-219ENST00000513275 FBLN2P98095 1184 aa12.74□□□□□ -0.37
SLC38A9-219ENST00000513275 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
SLC38A9-219ENST00000513275 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
SLC38A9-219ENST00000513275 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
SLC38A9-219ENST00000513275 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
SLC38A9-219ENST00000513275 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
SLC38A9-219ENST00000513275 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
SLC38A9-219ENST00000513275 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
SLC38A9-219ENST00000513275 HAX1O00165 279 aa12.58□□□□□ -0.4
SLC38A9-219ENST00000513275 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
SLC38A9-219ENST00000513275 ZNF692Q9BU19 519 aaPredicted RBP12.48□□□□□ -0.41
SLC38A9-219ENST00000513275 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
SLC38A9-219ENST00000513275 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
SLC38A9-219ENST00000513275 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
SLC38A9-219ENST00000513275 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
SLC38A9-219ENST00000513275 EVX2Q03828 476 aa12.28□□□□□ -0.44
SLC38A9-219ENST00000513275 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
SLC38A9-219ENST00000513275 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
SLC38A9-219ENST00000513275 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
SLC38A9-219ENST00000513275 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
SLC38A9-219ENST00000513275 GABBR2O75899 941 aa12.07□□□□□ -0.48
SLC38A9-219ENST00000513275 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
SLC38A9-219ENST00000513275 CD44P16070 742 aaKnown RBP12.01□□□□□ -0.49
SLC38A9-219ENST00000513275 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
SLC38A9-219ENST00000513275 CLCN6P51797 869 aa11.96□□□□□ -0.49
SLC38A9-219ENST00000513275 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
SLC38A9-219ENST00000513275 LHX8Q68G74 356 aa11.89□□□□□ -0.51
SLC38A9-219ENST00000513275 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
SLC38A9-219ENST00000513275 ZNF579Q8NAF0 562 aaKnown RBP11.81□□□□□ -0.52
SLC38A9-219ENST00000513275 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
SLC38A9-219ENST00000513275 DCBLD2Q96PD2 775 aa11.8□□□□□ -0.52
SLC38A9-219ENST00000513275 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
SLC38A9-219ENST00000513275 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
SLC38A9-219ENST00000513275 NPM1P06748 294 aaKnown RBP eCLIP11.73□□□□□ -0.53
SLC38A9-219ENST00000513275 FKBP8Q14318 412 aa11.67□□□□□ -0.54
SLC38A9-219ENST00000513275 GALR2O43603 387 aaPredicted RBP11.63□□□□□ -0.55
SLC38A9-219ENST00000513275 PHF12Q96QT6 1004 aa11.59□□□□□ -0.55
SLC38A9-219ENST00000513275 MNX1P50219 401 aaPredicted RBP11.58□□□□□ -0.56
SLC38A9-219ENST00000513275 PROM2Q8N271 834 aa11.53□□□□□ -0.56
SLC38A9-219ENST00000513275 PLEKHG5O94827 1062 aa11.49□□□□□ -0.57
SLC38A9-219ENST00000513275 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
SLC38A9-219ENST00000513275 TSPYL2Q9H2G4 693 aaPredicted RBP11.44□□□□□ -0.58
SLC38A9-219ENST00000513275 ASTLQ6HA08 431 aaPredicted RBP11.41□□□□□ -0.58
SLC38A9-219ENST00000513275 SLC39A7Q92504 469 aa11.39□□□□□ -0.59
SLC38A9-219ENST00000513275 OTUD5Q96G74 571 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms