RNA–Protein interactions for RNA: ENST00000512208.5

SLC38A9-217, Transcript of solute carrier family 38 member 9, humanhuman

TSL 4

Gene SLC38A9, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-217ENST00000512208 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
SLC38A9-217ENST00000512208 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
SLC38A9-217ENST00000512208 SENP3Q9H4L4 574 aaPredicted RBP23■■□□□ 1.27
SLC38A9-217ENST00000512208 PHF23Q9BUL5 403 aaPredicted RBP22.72■■□□□ 1.23
SLC38A9-217ENST00000512208 FOXD1Q16676 465 aa21.43■■□□□ 1.02
SLC38A9-217ENST00000512208 POTEDQ86YR6 584 aa21■□□□□ 0.95
SLC38A9-217ENST00000512208 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
SLC38A9-217ENST00000512208 MSH5O43196 834 aa20.07■□□□□ 0.8
SLC38A9-217ENST00000512208 PIAS4Q8N2W9 510 aaPredicted RBP20.04■□□□□ 0.8
SLC38A9-217ENST00000512208 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
SLC38A9-217ENST00000512208 ADRA2BP18089 450 aa19.99■□□□□ 0.79
SLC38A9-217ENST00000512208 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
SLC38A9-217ENST00000512208 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
SLC38A9-217ENST00000512208 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
SLC38A9-217ENST00000512208 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
SLC38A9-217ENST00000512208 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
SLC38A9-217ENST00000512208 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
SLC38A9-217ENST00000512208 HOXD11P31277 338 aaPredicted RBP17.56■□□□□ 0.4
SLC38A9-217ENST00000512208 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
SLC38A9-217ENST00000512208 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
SLC38A9-217ENST00000512208 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
SLC38A9-217ENST00000512208 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
SLC38A9-217ENST00000512208 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
SLC38A9-217ENST00000512208 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
SLC38A9-217ENST00000512208 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
SLC38A9-217ENST00000512208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.28
SLC38A9-217ENST00000512208 KCNA4P22459 653 aa16.66■□□□□ 0.26
SLC38A9-217ENST00000512208 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
SLC38A9-217ENST00000512208 POTEHQ6S545 545 aa16.26■□□□□ 0.19
SLC38A9-217ENST00000512208 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
SLC38A9-217ENST00000512208 CAPN15O75808 1086 aa16.16■□□□□ 0.18
SLC38A9-217ENST00000512208 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
SLC38A9-217ENST00000512208 DSG3P32926 999 aa16.03■□□□□ 0.16
SLC38A9-217ENST00000512208 APLP2Q06481 763 aa15.97■□□□□ 0.15
SLC38A9-217ENST00000512208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
SLC38A9-217ENST00000512208 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
SLC38A9-217ENST00000512208 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
SLC38A9-217ENST00000512208 ZNF219Q9P2Y4 722 aaPredicted RBP15.85■□□□□ 0.13
SLC38A9-217ENST00000512208 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
SLC38A9-217ENST00000512208 ABCB7O75027 752 aa15.77■□□□□ 0.12
SLC38A9-217ENST00000512208 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
SLC38A9-217ENST00000512208 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
SLC38A9-217ENST00000512208 FOXD4L1Q9NU39 408 aa15.55■□□□□ 0.08
SLC38A9-217ENST00000512208 POLA2Q14181 598 aa15.47■□□□□ 0.07
SLC38A9-217ENST00000512208 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
SLC38A9-217ENST00000512208 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
SLC38A9-217ENST00000512208 ZBTB22O15209 634 aa15.29■□□□□ 0.04
SLC38A9-217ENST00000512208 ZBTB12Q9Y330 459 aaPredicted RBP15.14■□□□□ 0.01
SLC38A9-217ENST00000512208 ATXN8OSP0DMR3 200 aa15.08■□□□□ 0
SLC38A9-217ENST00000512208 CHRDL2Q6WN34 429 aa14.96□□□□□ -0.01
SLC38A9-217ENST00000512208 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
SLC38A9-217ENST00000512208 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
SLC38A9-217ENST00000512208 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
SLC38A9-217ENST00000512208 SP7Q8TDD2 431 aaPredicted RBP14.8□□□□□ -0.04
SLC38A9-217ENST00000512208 FBLN2P98095 1184 aa14.79□□□□□ -0.04
SLC38A9-217ENST00000512208 SPDYE2BA6NHP3 402 aa14.67□□□□□ -0.06
SLC38A9-217ENST00000512208 SPDYE6P0CI01 402 aa14.67□□□□□ -0.06
SLC38A9-217ENST00000512208 SPDYE2Q495Y8 402 aa14.67□□□□□ -0.06
SLC38A9-217ENST00000512208 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
SLC38A9-217ENST00000512208 MKRN4PQ13434 485 aaPredicted RBP14.64□□□□□ -0.07
SLC38A9-217ENST00000512208 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
SLC38A9-217ENST00000512208 PIP4P2Q8N4L2 257 aa14.61□□□□□ -0.07
SLC38A9-217ENST00000512208 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
SLC38A9-217ENST00000512208 ZNF692Q9BU19 519 aaPredicted RBP14.52□□□□□ -0.09
SLC38A9-217ENST00000512208 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
SLC38A9-217ENST00000512208 SSUH2Q9Y2M2 353 aa14.45□□□□□ -0.1
SLC38A9-217ENST00000512208 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
SLC38A9-217ENST00000512208 CLEC11AQ9Y240 323 aa14.43□□□□□ -0.1
SLC38A9-217ENST00000512208 HAX1O00165 279 aa14.38□□□□□ -0.11
SLC38A9-217ENST00000512208 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
SLC38A9-217ENST00000512208 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
SLC38A9-217ENST00000512208 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
SLC38A9-217ENST00000512208 EVX2Q03828 476 aa14.16□□□□□ -0.14
SLC38A9-217ENST00000512208 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
SLC38A9-217ENST00000512208 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
SLC38A9-217ENST00000512208 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
SLC38A9-217ENST00000512208 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
SLC38A9-217ENST00000512208 FARP1Q9Y4F1 1045 aaPredicted RBP13.92□□□□□ -0.18
SLC38A9-217ENST00000512208 LHX8Q68G74 356 aa13.89□□□□□ -0.19
SLC38A9-217ENST00000512208 GABBR2O75899 941 aa13.87□□□□□ -0.19
SLC38A9-217ENST00000512208 PLSCR2Q9NRY7 297 aa13.85□□□□□ -0.19
SLC38A9-217ENST00000512208 CD44P16070 742 aaKnown RBP13.83□□□□□ -0.2
SLC38A9-217ENST00000512208 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
SLC38A9-217ENST00000512208 CLCN6P51797 869 aa13.66□□□□□ -0.22
SLC38A9-217ENST00000512208 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
SLC38A9-217ENST00000512208 PROM2Q8N271 834 aa13.59□□□□□ -0.23
SLC38A9-217ENST00000512208 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
SLC38A9-217ENST00000512208 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
SLC38A9-217ENST00000512208 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
SLC38A9-217ENST00000512208 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
SLC38A9-217ENST00000512208 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
SLC38A9-217ENST00000512208 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
SLC38A9-217ENST00000512208 GALR2O43603 387 aaPredicted RBP13.45□□□□□ -0.26
SLC38A9-217ENST00000512208 PHF12Q96QT6 1004 aa13.44□□□□□ -0.26
SLC38A9-217ENST00000512208 MIER1Q8N108 512 aa13.37□□□□□ -0.27
SLC38A9-217ENST00000512208 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
SLC38A9-217ENST00000512208 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
SLC38A9-217ENST00000512208 FKBP8Q14318 412 aa13.28□□□□□ -0.28
SLC38A9-217ENST00000512208 PLCD3Q8N3E9 789 aa13.25□□□□□ -0.29
SLC38A9-217ENST00000512208 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms