RNA–Protein interactions for RNA: ENST00000512102.1

KCNIP4-208, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 5

Gene KCNIP4, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-208ENST00000512102 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
KCNIP4-208ENST00000512102 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
KCNIP4-208ENST00000512102 SENP3Q9H4L4 574 aaPredicted RBP22.16■■□□□ 1.14
KCNIP4-208ENST00000512102 PHF23Q9BUL5 403 aaPredicted RBP21.79■■□□□ 1.08
KCNIP4-208ENST00000512102 FOXD1Q16676 465 aa20.69■□□□□ 0.9
KCNIP4-208ENST00000512102 POTEDQ86YR6 584 aa19.75■□□□□ 0.75
KCNIP4-208ENST00000512102 MSH5O43196 834 aa19.54■□□□□ 0.72
KCNIP4-208ENST00000512102 PIAS4Q8N2W9 510 aaPredicted RBP19.16■□□□□ 0.66
KCNIP4-208ENST00000512102 PLPPR3Q6T4P5 718 aa19.13■□□□□ 0.65
KCNIP4-208ENST00000512102 PPP6R1Q9UPN7 881 aa19.02■□□□□ 0.64
KCNIP4-208ENST00000512102 ADRA2BP18089 450 aa18.88■□□□□ 0.61
KCNIP4-208ENST00000512102 DMRT2Q9Y5R5 561 aa17.52■□□□□ 0.4
KCNIP4-208ENST00000512102 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
KCNIP4-208ENST00000512102 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
KCNIP4-208ENST00000512102 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
KCNIP4-208ENST00000512102 HOXD11P31277 338 aaPredicted RBP16.76■□□□□ 0.27
KCNIP4-208ENST00000512102 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
KCNIP4-208ENST00000512102 RNF39Q9H2S5 420 aa16.66■□□□□ 0.26
KCNIP4-208ENST00000512102 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
KCNIP4-208ENST00000512102 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
KCNIP4-208ENST00000512102 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
KCNIP4-208ENST00000512102 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
KCNIP4-208ENST00000512102 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
KCNIP4-208ENST00000512102 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
KCNIP4-208ENST00000512102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
KCNIP4-208ENST00000512102 NPM3O75607 178 aaKnown RBP15.69■□□□□ 0.1
KCNIP4-208ENST00000512102 KCNA4P22459 653 aa15.52■□□□□ 0.08
KCNIP4-208ENST00000512102 U3KPZ7 1027 aaPredicted RBP15.5■□□□□ 0.07
KCNIP4-208ENST00000512102 DSG3P32926 999 aa15.43■□□□□ 0.06
KCNIP4-208ENST00000512102 POTEHQ6S545 545 aa15.39■□□□□ 0.05
KCNIP4-208ENST00000512102 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
KCNIP4-208ENST00000512102 CAPN15O75808 1086 aa15.3■□□□□ 0.04
KCNIP4-208ENST00000512102 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
KCNIP4-208ENST00000512102 APLP2Q06481 763 aa15.04■□□□□ -0
KCNIP4-208ENST00000512102 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
KCNIP4-208ENST00000512102 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.01
KCNIP4-208ENST00000512102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
KCNIP4-208ENST00000512102 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
KCNIP4-208ENST00000512102 ABCB7O75027 752 aa14.89□□□□□ -0.03
KCNIP4-208ENST00000512102 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
KCNIP4-208ENST00000512102 RBM42Q9BTD8 480 aaKnown RBP14.73□□□□□ -0.05
KCNIP4-208ENST00000512102 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
KCNIP4-208ENST00000512102 CHRDL2Q6WN34 429 aa14.55□□□□□ -0.08
KCNIP4-208ENST00000512102 MYCNP04198 464 aaPredicted RBP14.53□□□□□ -0.08
KCNIP4-208ENST00000512102 POLA2Q14181 598 aa14.53□□□□□ -0.08
KCNIP4-208ENST00000512102 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
KCNIP4-208ENST00000512102 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
KCNIP4-208ENST00000512102 ZBTB22O15209 634 aa14.3□□□□□ -0.12
KCNIP4-208ENST00000512102 ZBTB12Q9Y330 459 aaPredicted RBP14.25□□□□□ -0.13
KCNIP4-208ENST00000512102 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
KCNIP4-208ENST00000512102 ATF5Q9Y2D1 282 aaPredicted RBP14.21□□□□□ -0.13
KCNIP4-208ENST00000512102 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
KCNIP4-208ENST00000512102 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
KCNIP4-208ENST00000512102 OSCARQ8IYS5 282 aa14.04□□□□□ -0.16
KCNIP4-208ENST00000512102 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.17
KCNIP4-208ENST00000512102 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
KCNIP4-208ENST00000512102 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
KCNIP4-208ENST00000512102 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
KCNIP4-208ENST00000512102 HAX1O00165 279 aa13.91□□□□□ -0.18
KCNIP4-208ENST00000512102 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
KCNIP4-208ENST00000512102 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
KCNIP4-208ENST00000512102 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
KCNIP4-208ENST00000512102 EVX2Q03828 476 aa13.77□□□□□ -0.21
KCNIP4-208ENST00000512102 SPDYE2Q495Y8 402 aa13.77□□□□□ -0.21
KCNIP4-208ENST00000512102 FBLN2P98095 1184 aa13.66□□□□□ -0.22
KCNIP4-208ENST00000512102 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
KCNIP4-208ENST00000512102 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
KCNIP4-208ENST00000512102 C19orf67A6NJJ6 358 aa13.58□□□□□ -0.24
KCNIP4-208ENST00000512102 SSUH2Q9Y2M2 353 aa13.57□□□□□ -0.24
KCNIP4-208ENST00000512102 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
KCNIP4-208ENST00000512102 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
KCNIP4-208ENST00000512102 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
KCNIP4-208ENST00000512102 GABBR2O75899 941 aa13.44□□□□□ -0.26
KCNIP4-208ENST00000512102 LHX8Q68G74 356 aa13.34□□□□□ -0.27
KCNIP4-208ENST00000512102 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
KCNIP4-208ENST00000512102 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
KCNIP4-208ENST00000512102 PABPN1Q86U42 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
KCNIP4-208ENST00000512102 CLCN6P51797 869 aa13.21□□□□□ -0.29
KCNIP4-208ENST00000512102 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
KCNIP4-208ENST00000512102 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
KCNIP4-208ENST00000512102 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
KCNIP4-208ENST00000512102 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
KCNIP4-208ENST00000512102 DCBLD2Q96PD2 775 aa12.93□□□□□ -0.34
KCNIP4-208ENST00000512102 CREBZFQ9NS37 354 aa12.9□□□□□ -0.34
KCNIP4-208ENST00000512102 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
KCNIP4-208ENST00000512102 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
KCNIP4-208ENST00000512102 STAG3Q9UJ98 1225 aa12.87□□□□□ -0.35
KCNIP4-208ENST00000512102 GALR2O43603 387 aaPredicted RBP12.79□□□□□ -0.36
KCNIP4-208ENST00000512102 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
KCNIP4-208ENST00000512102 PROM2Q8N271 834 aa12.74□□□□□ -0.37
KCNIP4-208ENST00000512102 POTEB2H3BUK9 544 aa12.72□□□□□ -0.37
KCNIP4-208ENST00000512102 PLSCR2Q9NRY7 297 aa12.69□□□□□ -0.38
KCNIP4-208ENST00000512102 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
KCNIP4-208ENST00000512102 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
KCNIP4-208ENST00000512102 PHF12Q96QT6 1004 aa12.64□□□□□ -0.39
KCNIP4-208ENST00000512102 NPM1P06748 294 aaKnown RBP eCLIP12.63□□□□□ -0.39
KCNIP4-208ENST00000512102 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
KCNIP4-208ENST00000512102 ASTLQ6HA08 431 aaPredicted RBP12.58□□□□□ -0.4
KCNIP4-208ENST00000512102 FKBP8Q14318 412 aa12.57□□□□□ -0.4
KCNIP4-208ENST00000512102 POTEMA6NI47 508 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms